FFCP PHASE1:Hg19::chr6:170893742..170893754,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5134|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8762|TSSclassifier=S|UniProt=Q58HM9,Q58HN0,F5GYS7,Q7Z6S7|association_with_transcript=0bp_to_ENST00000443345,ENST00000541970,NM_001199462,NM_001199463,NM_001199464,uc003qxw.2,uc003qxx.1,uc003qxz.2,uc003qyb.1_5end|description=CAGE_peak_2_at_PDCD2_5end|id=chr6:170893742..170893754,-|ontology_enrichment_celltype=CL:0002321!5.19e-09!248;CL:0000220!1.72e-08!246;CL:0000066!1.38e-07!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002321,5.43e-09,250;CL:0000066,2.47e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!6.99e-08!235;DOID:14566!8.76e-08!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,7.89e-08,235;DOID:14566,1.03e-07,239|ontology_enrichment_uberon=UBERON:0005177!5.66e-07!107;UBERON:0002100!6.36e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.48e-07,199|phase1_expression=2.72517568905835,2.5692062866918,3.24195129420734,2.00146596706261,3.5756887554183,3.48935409640147,5.06599756336621,2.52687949370732,7.05201196139564,3.44027511102112,2.79120467188971,4.58726881473362,4.22027165165526,6.43585035392242,5.63375538737457,4.70627602516243,3.61616716814386,3.65155045193687,5.85519358548608,3.57051068422685,7.14002419354885,8.46327747990837,2.57612388417951,3.83248390204076,4.2684497462233,1.83392173795083,2.62721886239826,2.2826126580967,4.72037132218685,0.767658796194425,2.63187409637329,2.75826367343678,2.71085326900425,4.43704812200145,2.24654881682875,5.82893853198428,5.28480790802725,4.43196326825502,2.4065333696417,2.17010870715852,2.23915474239924,1.94336199611388,1.54545340580512,1.01778767145695,1.88937971844405,1.4555043671269,2.09186133215116,1.6446715520873,0.619412741790207,1.1507695692886,2.30544635876191,0.47296445977717,0.689491361473237,0,1.35426486594342,1.88242339542605,1.36453075028923,1.12361742222542,0.918251677112708,1.28371610830437,0,1.31940520074686,1.19678194572979,1.70489900213078,1.45104619314292,0,0,0.75374599577023,0.521482918420201,1.3031330682307,1.81619850790011,1.10483290796269,0.316462387440884,1.26753171787165,2.55125159958052,1.25795187305026,1.46027220490444,2.10247649978109,0.803627933485401,1.71007646244749,0.99458338599545,1.64397738388171,0,0,1.77901850772711,0.853460445133014,1.20118796110804,1.14950487990897,0.661044872784862,0,0.569212969109448,2.34894875748376,0.382273228125229,11.8954195721123,2.24203425192614,2.63384084775077,1.96709770113833,1.57204305099666,3.08402248499264,0.501559486172034,1.30368906653436,0.946895611469467,0,1.00269411196656,0.883817722424512,1.55073726208535,0.270803863765016,2.68991771423918,2.34106825607781,2.46656856905514,1.93445012450094,2.02862160014537,1.4828656316206,2.67540828089713,1.04535523804977,1.24640276967323,0.766440987203842,1.37450978193052,1.01207876807801,1.59282707162048,2.60433381542567,2.85135613334512,1.35517607169996,1.15187950038977,1.24930726552346,1.18388626022008,1.64225599384209,2.01606743224732,1.06976078313403,1.15859523106239,2.43806866313962,4.69490601792545,1.91793842765295,3.61439152384566,4.01070328508712,5.5041677205113,0,3.40644409211845,4.72674085820339,3.76939975686359,4.56740885604255,2.94702919869853,5.10013403609559,5.19098219898201,3.57002133020152,3.13433527138681,2.12732736830184,2.14641561874808,2.85997455390064,1.85728750664782,2.58391129576717,6.881876760849,4.16568601929113,3.95715559346807,2.09749718104953,2.20094433552054,1.8809546988313,2.32575083252396,5.69226020298736,2.67776490211736,3.62546385398232,3.04108842287405,5.12530320851156,1.83831540172934,2.43042584364528,1.42879565254528,4.4905874525234,3.0405099730497,1.53316637465883,3.79706263827252,2.5648244150257,0,0,6.97750483428055,5.4666914686485,1.8994576749687,3.57504788195691,0.860509862246441,3.90135220418193,5.60677600142307,3.20246987189115,2.71334303258876,4.35695449559673,2.55950276932407,1.47115712802113,3.32986340818849,5.18558332031999,1.87457145467037,8.11616199758833,8.55707732316674,8.07022874979726,3.99277295388801,3.0755859429945,3.65172097425846,4.69554593886255,2.7023549808589,6.50952421407322,2.37600571456411,4.94533858557114,2.73048408581408,7.90479955997862,2.86171393721913,3.37820003654303,4.15596173226274,2.19488810440419,2.14541457059314,4.05642759047811,3.40296549480063,1.25572744982203,4.05759038755278,2.7551147150743,0.900273288253207,1.03052529238439,1.28820270022815,3.7223371266318,1.5189869901714,1.36411807225678,1.00973509697646,4.32634523618807,0.484938170456436,1.06502877754984,1.41052937518696,3.39121184620975,4.05847791642923,1.09098448236334,3.15485054927904,7.07447495551653,6.89154795271723,6.85544262930159,4.35376431064556,6.30802127189071,4.01475094983413,3.12899064659632,3.85944562915731,2.76269842704961,3.71494342425583,8.66255378003503,1.41968160047813,0.505754070234305,0.964044119533928,0.772057809126758,0.653638332277218,0.711811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5119802,5.29342307573538,3.45037876763424,6.57302749421866,1.83491713361816,0.430018749454354,4.25983217921598,1.69978725477287,15.2722741619132,3.1741610430924,1.85997509083376,6.93263442947127,2.16313281061895,13.1213081828482,5.46327859818478,5.8281310465261,8.77103935781043,4.54269588951453,3.40011128278926,2.50707539292375,4.39516449665789,2.14371304124943,0.829169439458779,1.03432995861895,3.41174371041569,5.95161078659351,4.13369022950439,1.73809200028402,6.39151616709497,3.81882949668989,5.86139847978836,2.17716747896961,3.76456631193809,2.55937801455433,3.65783247502649,5.32256570473621,2.76771113277313,11.3130986630378,5.7921684686082,9.6112966254048,0,1.71138021856013,5.2896503181046,3.99454064511308,3.01910690386539,4.80852738454849|short_description=p2@PDCD2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8762 | |||
|TSSclassifier=S | |||
|UniProt=Q58HM9,Q58HN0,F5GYS7,Q7Z6S7 | |||
|association_with_transcript=0bp_to_ENST00000443345,ENST00000541970,NM_001199462,NM_001199463,NM_001199464,uc003qxw.2,uc003qxx.1,uc003qxz.2,uc003qyb.1_5end | |||
|description=CAGE_peak_2_at_PDCD2_5end | |||
|id=chr6:170893742..170893754,- | |||
|ontology_enrichment_celltype=CL:0002321!5.19e-09!248;CL:0000220!1.72e-08!246;CL:0000066!1.38e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.43e-09,250;CL:0000066,2.47e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.99e-08!235;DOID:14566!8.76e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.89e-08,235;DOID:14566,1.03e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005177!5.66e-07!107;UBERON:0002100!6.36e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.48e-07,199 | |||
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| |||
|short_description=p2@PDCD2 | |||
}} |
Revision as of 19:29, 13 September 2013
Short description: | p2@PDCD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDCD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443345, ENST00000541970, NM_001199462, NM_001199463, NM_001199464, uc003qxw.2, uc003qxx.1, uc003qxz.2, uc003qyb.1_5end |
EntrezGene: | PDCD2 |
HGNC: | 8762 |
UniProt: | Q58HM9Q58HN0F5GYS7Q7Z6S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.43e-09 | 250 |
epithelial cell | 2.47e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk | 7.48e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.89e-08 | 235 |
disease of cellular proliferation | 1.03e-07 | 239 |
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