FFCP PHASE1:Mm9::chr1:167391372..167391402,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70456|HGNC=|UniProt=|association_with_transcript=17bp_to_ENSMUST00000128633_5end|description=CAGE_peak_1_at_Brp44_5end|id=chr1:167391372..167391402,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!9.99e-13!47;UBERON:0002365!1.14e-11!25;UBERON:0002330!1.14e-11!25;UBERON:0009854!1.78e-10!23;UBERON:0009856!1.78e-10!23;UBERON:0002107!1.84e-10!22;UBERON:0007499!1.84e-10!22;UBERON:0006925!1.84e-10!22;UBERON:0009497!1.84e-10!22;UBERON:0000015!1.84e-10!22;UBERON:0002423!1.84e-10!22;UBERON:0006235!1.84e-10!22;UBERON:0008835!1.84e-10!22;UBERON:0003894!1.84e-10!22;UBERON:0004161!1.84e-10!22;UBERON:0008836!1.84e-10!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.99e-13,47;UBERON:0002365,1.14e-11,25;UBERON:0002330,1.14e-11,25;UBERON:0009854,1.78e-10,23;UBERON:0009856,1.78e-10,23;UBERON:0002107,1.84e-10,22;UBERON:0007499,1.84e-10,22;UBERON:0006925,1.84e-10,22;UBERON:0009497,1.84e-10,22;UBERON:0000015,1.84e-10,22;UBERON:0002423,1.84e-10,22;UBERON:0006235,1.84e-10,22;UBERON:0008835,1.84e-10,22;UBERON:0003894,1.84e-10,22;UBERON:0004161,1.84e-10,22;UBERON:0008836,1.84e-10,22;UBERON:0003104,6.74e-08,61;UBERON:0009142,6.74e-08,61|phase1_expression=12.3314612270691,90.3846305785945,95.5498402718026,103.442760266936,120.214975187123,47.3419546791529,44.8536269943409,18.2063886052623,18.4433226018683,17.5548394741495,18.8339765048055,13.2421783932258,17.462474452983,15.4734112281625,31.3123176106723,42.1148556170838,46.8706458345858,13.8803352757625,13.7114433605739,16.9755860719212,52.2165801527568,15.588679338539,27.1647780704493,58.2372418968,57.3523202667925,115.420624787119,96.4906871396328,74.3375752766317,82.4701640440663,80.9016716529378,66.2974226859361,8.89042942843484,3.69038872550742,0,73.657163036575,104.894061221209,92.2845490305908,136.022779989495,168.768434417141,177.998072951091,248.233687949088,181.690098998947,227.704355571611,19.7658004221656,21.3905324873176,25.6965453026354,29.7308710852255,35.5381004900128,33.3922997756397,47.0520355759766,20.5780039789283,17.2503077237966,23.6573474541408,20.3101399763176,21.5100031451177,181.625161841379,18.9112070359579,134.590416084412,13.9598357993122,12.6957835025288,22.8179305262225,47.7770790217476,54.2469825627795,23.8473425079571,14.8329954385046,17.0515227587064,37.1504137042822,36.5007390055477,5.49554945234932,5.13022565660425,4.83747411108179,50.2745732550694,44.3945767312743,6.1245399607477,7.85932862349538,1.83843757322004,63.8672109796454,53.3733073196085,48.6932710422292,10.0233578674947,11.4359554503012,9.37644067002168,79.2879717163922,51.7741601229146,40.3387374130779,29.4628585473668,25.1997875014412,13.4207600994216,15.4481434399695,11.260162455911,36.2330610877097,297.70666143556,251.589393471868,287.661801142957,274.855424580364,254.479271871287,153.365306783873,28.1210032253795,40.0070447088418,37.1006553235857,14.6477156567748,30.7983545794363,58.6052051325285,78.2173373468664,23.1645413881999,27.3628654713106,27.8038444758131,159.971615486403,10.616453229534,27.7586800051222,9.54169297213747,13.7009465240464,20.2941637585331,20.6490017557093,12.4644029563847,146.024579125083,12.1125534189843,127.102834732602,61.0381280845413,29.7651003903233,61.3939421319894,36.8505192382769,42.8701050801681,21.6657789788545,22.4107976290397,40.8731288333746,24.3224702747018,55.7909539823869,26.8118179124167,22.9179678289379,28.8225379775735,16.2094114225595,25.3783507480724,26.8501230196847,33.4538751740892,33.7461827180936,11.1004906596845,39.8102305952298,25.0195530849338,99.3285559784157,5.20481771850815,9.88579049063934,5.22180176435513,12.8099095160358,7.14383241088942,6.53379973452734,9.83868107877153,50.9645640355861,4.74249584452253,3.02569728268511,5.27853372491847,6.79506770525482,5.56094498451196,6.268538997399,4.11564272815887,7.36426787228425,32.3018066164088,28.8229655968481,24.438060948021,18.4341937556597,20.1692411583743,30.6105504483725,25.5684314432027,44.4687163749133,60.1641740260775,82.7820843311452,109.723821172444,82.2028010264873,129.837721581736,158.585770300406,177.540692905424,259.504977679965,217.35461413814,237.276948368337,23.5524742391823,6.99751364179134,56.8320306732133,43.1054423661577,5.11891801284562,6.73486348395272,8.63411990858025,12.9077455758939,11.3412802360884,18.6421113590308,52.1981967698963,21.7402620235694,21.1121575392226,19.4977342600328,24.37051088989,31.4586793028978,57.0604451669193,45.6033515752501,18.9667900953082,22.5069569841166,22.5415471346161,54.1712532068536,64.780130713987,70.9073139091121,99.9769651934508,176.541736983604,212.576277497221,237.045951893779,325.801437168777,21.5230186373761,28.3044952963012,37.5519727682706,54.7722327748958,77.4178682805258,115.345510856983,105.296786306997,163.270173362461,278.130711559527,109.263836960789,253.427985362251,324.831217712258,289.45539412739,241.289521186972,248.940857023497,14.4107488329952,5.68474235311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| ||
|EntrezGene=70456 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENSMUST00000128633_5end | |||
|description=CAGE_peak_1_at_Brp44_5end | |||
|id=chr1:167391372..167391402,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.99e-13!47;UBERON:0002365!1.14e-11!25;UBERON:0002330!1.14e-11!25;UBERON:0009854!1.78e-10!23;UBERON:0009856!1.78e-10!23;UBERON:0002107!1.84e-10!22;UBERON:0007499!1.84e-10!22;UBERON:0006925!1.84e-10!22;UBERON:0009497!1.84e-10!22;UBERON:0000015!1.84e-10!22;UBERON:0002423!1.84e-10!22;UBERON:0006235!1.84e-10!22;UBERON:0008835!1.84e-10!22;UBERON:0003894!1.84e-10!22;UBERON:0004161!1.84e-10!22;UBERON:0008836!1.84e-10!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.99e-13,47;UBERON:0002365,1.14e-11,25;UBERON:0002330,1.14e-11,25;UBERON:0009854,1.78e-10,23;UBERON:0009856,1.78e-10,23;UBERON:0002107,1.84e-10,22;UBERON:0007499,1.84e-10,22;UBERON:0006925,1.84e-10,22;UBERON:0009497,1.84e-10,22;UBERON:0000015,1.84e-10,22;UBERON:0002423,1.84e-10,22;UBERON:0006235,1.84e-10,22;UBERON:0008835,1.84e-10,22;UBERON:0003894,1.84e-10,22;UBERON:0004161,1.84e-10,22;UBERON:0008836,1.84e-10,22;UBERON:0003104,6.74e-08,61;UBERON:0009142,6.74e-08,61 | |||
|phase1_expression=12.3314612270691,90.3846305785945,95.5498402718026,103.442760266936,120.214975187123,47.3419546791529,44.8536269943409,18.2063886052623,18.4433226018683,17.5548394741495,18.8339765048055,13.2421783932258,17.462474452983,15.4734112281625,31.3123176106723,42.1148556170838,46.8706458345858,13.8803352757625,13.7114433605739,16.9755860719212,52.2165801527568,15.588679338539,27.1647780704493,58.2372418968,57.3523202667925,115.420624787119,96.4906871396328,74.3375752766317,82.4701640440663,80.9016716529378,66.2974226859361,8.89042942843484,3.69038872550742,0,73.657163036575,104.894061221209,92.2845490305908,136.022779989495,168.768434417141,177.998072951091,248.233687949088,181.690098998947,227.704355571611,19.7658004221656,21.3905324873176,25.6965453026354,29.7308710852255,35.5381004900128,33.3922997756397,47.0520355759766,20.5780039789283,17.2503077237966,23.6573474541408,20.3101399763176,21.5100031451177,181.625161841379,18.9112070359579,134.590416084412,13.9598357993122,12.6957835025288,22.8179305262225,47.7770790217476,54.2469825627795,23.8473425079571,14.8329954385046,17.0515227587064,37.1504137042822,36.5007390055477,5.49554945234932,5.13022565660425,4.83747411108179,50.2745732550694,44.3945767312743,6.1245399607477,7.85932862349538,1.83843757322004,63.8672109796454,53.3733073196085,48.6932710422292,10.0233578674947,11.4359554503012,9.37644067002168,79.2879717163922,51.7741601229146,40.3387374130779,29.4628585473668,25.1997875014412,13.4207600994216,15.4481434399695,11.260162455911,36.2330610877097,297.70666143556,251.589393471868,287.661801142957,274.855424580364,254.479271871287,153.365306783873,28.1210032253795,40.0070447088418,37.1006553235857,14.6477156567748,30.7983545794363,58.6052051325285,78.2173373468664,23.1645413881999,27.3628654713106,27.8038444758131,159.971615486403,10.616453229534,27.7586800051222,9.54169297213747,13.7009465240464,20.2941637585331,20.6490017557093,12.4644029563847,146.024579125083,12.1125534189843,127.102834732602,61.0381280845413,29.7651003903233,61.3939421319894,36.8505192382769,42.8701050801681,21.6657789788545,22.4107976290397,40.8731288333746,24.3224702747018,55.7909539823869,26.8118179124167,22.9179678289379,28.8225379775735,16.2094114225595,25.3783507480724,26.8501230196847,33.4538751740892,33.7461827180936,11.1004906596845,39.8102305952298,25.0195530849338,99.3285559784157,5.20481771850815,9.88579049063934,5.22180176435513,12.8099095160358,7.14383241088942,6.53379973452734,9.83868107877153,50.9645640355861,4.74249584452253,3.02569728268511,5.27853372491847,6.79506770525482,5.56094498451196,6.268538997399,4.11564272815887,7.36426787228425,32.3018066164088,28.8229655968481,24.438060948021,18.4341937556597,20.1692411583743,30.6105504483725,25.5684314432027,44.4687163749133,60.1641740260775,82.7820843311452,109.723821172444,82.2028010264873,129.837721581736,158.585770300406,177.540692905424,259.504977679965,217.35461413814,237.276948368337,23.5524742391823,6.99751364179134,56.8320306732133,43.1054423661577,5.11891801284562,6.73486348395272,8.63411990858025,12.9077455758939,11.3412802360884,18.6421113590308,52.1981967698963,21.7402620235694,21.1121575392226,19.4977342600328,24.37051088989,31.4586793028978,57.0604451669193,45.6033515752501,18.9667900953082,22.5069569841166,22.5415471346161,54.1712532068536,64.780130713987,70.9073139091121,99.9769651934508,176.541736983604,212.576277497221,237.045951893779,325.801437168777,21.5230186373761,28.3044952963012,37.5519727682706,54.7722327748958,77.4178682805258,115.345510856983,105.296786306997,163.270173362461,278.130711559527,109.263836960789,253.427985362251,324.831217712258,289.45539412739,241.289521186972,248.940857023497,14.4107488329952,5.68474235311454,5.37784422258685,6.95954851678271,9.62230017982859,13.2329943379034,15.2347930167049,24.0014386865093,10.8768249433272,15.9454576547118,14.9887482538038,25.7265404103709,34.8823663369109,25.8921814860906,19.6028669121054,14.1415477792864,168.18338137251,80.8494666672866,36.284433337241,49.3461200553175,8.36068221421045,230.253485610388,42.9091178406109,50.757036758563,25.2045375347375,35.8453196928828,24.7306528231457,20.9476632783736,28.7415598189175,29.2255857911312,26.0889933444706,15.1021018718249,13.200427924369,13.5329858787114,9.28455668315384,13.857490329693,14.6019652173959,16.7518638946937,19.6510312027088,21.6895841719283,15.9463022155617,15.6791925451403,17.0562673491026,19.6308213917853,19.9638531895444,28.1272714562876,39.0048851727495,39.191506434311,12.2558258071364,6.48219938512717,9.05510786479281,8.14480733120051,7.98031051390231,10.8804978737263,13.4930196893739,9.13394847343798,7.04015124191131,10.591603543191,16.7601582521771,29.0199805177005,10.8181165886257,29.5533332147964,17.0702451924485,11.8181447816444,27.399198643206,38.197612214165,21.1879892189337,13.4151464176095,12.9636169158798,27.5017947226849,23.1013244848533,27.9109371311958,21.9272174692073,28.6900477263499,24.5995953371874,56.3255664628917,5.3777118908793,9.1493760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| |||
|short_description=p1@Brp44 | |||
}} |
Revision as of 19:32, 13 September 2013
Short description: | p1@Brp44 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Brp44_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENSMUST00000128633_5end |
EntrezGene: | Brp44 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 9.99e-13 | 47 |
exocrine gland | 1.14e-11 | 25 |
exocrine system | 1.14e-11 | 25 |
digestive tract diverticulum | 1.78e-10 | 23 |
sac | 1.78e-10 | 23 |
liver | 1.84e-10 | 22 |
epithelial sac | 1.84e-10 | 22 |
digestive gland | 1.84e-10 | 22 |
epithelium of foregut-midgut junction | 1.84e-10 | 22 |
anatomical boundary | 1.84e-10 | 22 |
hepatobiliary system | 1.84e-10 | 22 |
foregut-midgut junction | 1.84e-10 | 22 |
hepatic diverticulum | 1.84e-10 | 22 |
liver primordium | 1.84e-10 | 22 |
septum transversum | 1.84e-10 | 22 |
liver bud | 1.84e-10 | 22 |
mesenchyme | 6.74e-08 | 61 |
entire embryonic mesenchyme | 6.74e-08 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.