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FFCP PHASE1:Mm9::chr1:4797947..4798009,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18777|HGNC=|MCL_coexpression_id=207|UniProt=D3Z111,D3Z269,P97823|association_with_transcript=0bp_to_ENSMUST00000115529,ENSMUST00000119612,ENSMUST00000137887,ENSMUST00000150971,ENSMUST00000155020,NM_008866,uc007afg.1,uc007afh.1_5end|description=CAGE_peak_1_at_Lypla1_5end|id=chr1:4797947..4798009,+|ontology_enrichment_celltype=CL:0000066!3.17e-07!25;CL:0000223!9.95e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-07,25;CL:0000223,9.95e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.34e-14!130;UBERON:0000925!3.34e-14!130;UBERON:0006595!3.34e-14!130;UBERON:0001007!5.95e-14!128;UBERON:0001555!5.95e-14!128;UBERON:0007026!5.95e-14!128;UBERON:0004921!5.89e-13!126;UBERON:0004185!5.89e-13!126;UBERON:0000160!3.95e-11!43;UBERON:0000344!3.05e-09!15;UBERON:0005409!1.07e-08!59;UBERON:0001242!4.58e-08!13;UBERON:0000060!4.58e-08!13;UBERON:0001262!4.58e-08!13;UBERON:0004786!4.58e-08!13;UBERON:0003914!3.20e-07!47;UBERON:0000490!3.75e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.28e-14,118;UBERON:0000925,2.28e-14,118;UBERON:0006595,2.28e-14,118;UBERON:0001007,3.94e-14,116;UBERON:0001555,3.94e-14,116;UBERON:0007026,3.94e-14,116;UBERON:0000160,1.66e-13,31;UBERON:0004921,4.03e-13,114;UBERON:0005409,1.27e-09,47;UBERON:0000344,3.05e-09,15;UBERON:0001242,4.58e-08,13;UBERON:0001262,4.58e-08,13;UBERON:0004786,4.58e-08,13;UBERON:0003914,3.20e-07,47;UBERON:0000490,3.75e-07,66|phase1_expression=63.8993899948128,414.582784275561,381.289362608431,321.216992407854,268.480111251242,193.396921242497,226.837874018255,80.3147071806604,62.087826468885,59.6864542121083,77.9041755426048,73.3903862757095,91.2499890533327,79.5525662012876,43.3042690360362,36.2430728627788,35.6776557845355,72.8717601977529,77.6067694208482,77.6633062790395,79.260346420797,73.9717586446595,101.606717975046,313.74514109787,311.30839440815,450.197859866176,411.808468328075,345.615857228166,394.868665630345,377.289104250616,264.081038190468,17.14582818341,25.8327210785519,31.6963362030877,108.897060646231,123.678576146718,104.738879762595,151.926981957498,150.797721493093,202.60368891786,146.469640519723,152.319143145733,152.935761204813,77.6783366909312,75.9313214834164,65.709737273882,46.9434806608824,66.9337230087971,68.1027166476863,90.7987628676903,86.9315678293501,63.2511283205875,77.3477813926165,107.353597017679,107.886109524731,111.136076367529,114.899909415441,107.259795193708,31.9660008158165,35.9713865904982,41.8328726314078,47.0993899576094,57.8041617472241,53.5440331782432,55.3765163037506,39.7868864369816,38.0492140358374,23.8215349299364,34.4249512864146,33.616478644591,38.2791429659515,41.4193927385515,39.5354688303388,30.2552274060936,30.1913233707445,32.1726575313507,57.2602581196821,54.5224933623752,54.9911389057352,35.2136388239618,34.9482798561205,28.129322010065,56.6741487972803,28.7008931116157,44.4642901030517,45.0781735774712,38.2979821349587,33.9246991402047,59.5965141532158,71.9441252216598,74.4951735963312,264.150130233286,257.709135475237,372.395202230094,510.07448769642,567.202039065227,188.195522976547,87.2603251599656,86.7685255373582,92.5749685217091,53.3796560953619,71.862827352018,43.3168907501298,85.3280043783997,99.3693878241473,99.5704271317137,100.093840112927,256.34280996929,117.298861292169,82.0885029028481,57.423643159591,78.8565588828446,83.9440410012053,84.5554013500213,68.0838614315731,104.805937168949,171.306112639921,172.651632162375,86.6918340910877,64.2214394291214,76.4111653872962,74.185913729689,191.983514054666,50.6510778829977,43.5649150171987,327.495944777414,76.3222343102712,75.5877441051694,79.2918216935924,39.8443100816828,36.6000482254901,12.942398267625,46.7587421317224,31.708716708961,47.7912502486988,40.2358332408039,41.85597854248,66.93095018823,62.927966849985,124.371136828906,62.9782943939486,59.774547152703,59.9606892251813,63.446728308836,56.2661847981481,67.7721580306855,69.1518727250799,99.083390993043,73.0775496042335,62.2159003752125,52.0815327525289,56.9908904311695,54.4972608482172,69.6504333044333,71.6121834699643,45.180778567798,85.6700088522147,82.8660260909383,73.3141828440629,89.8925852804078,90.0580070327409,82.6484862106058,91.1467232003059,92.8727173847746,90.8633294906658,97.6642567951713,112.138281785041,103.921154706781,98.4067902482613,120.663086098135,128.656200749273,130.556588770822,151.050479320243,125.751414378468,41.0065399700048,31.7975252251989,461.595039828366,231.923146963928,61.4270161541474,53.1821978560404,84.0215847820049,112.741090264448,131.647801956163,157.506818421199,283.293849742073,241.778065534848,169.651265940182,191.794039047669,168.44897127092,294.812766038585,278.169670188731,320.816591212786,74.5394850745611,67.6351194649595,72.1329508307715,75.9619452863022,80.2963296873971,76.9389944196795,125.967181951521,202.963953471953,259.047900938268,252.347200220082,358.70767877545,49.8866866091121,48.5500717929611,49.6945268370527,54.9750928962843,63.9119473343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|EntrezGene=18777
|HGNC=
|MCL_coexpression_id=207
|UniProt=D3Z111,D3Z269,P97823
|association_with_transcript=0bp_to_ENSMUST00000115529,ENSMUST00000119612,ENSMUST00000137887,ENSMUST00000150971,ENSMUST00000155020,NM_008866,uc007afg.1,uc007afh.1_5end
|description=CAGE_peak_1_at_Lypla1_5end
|id=chr1:4797947..4798009,+
|ontology_enrichment_celltype=CL:0000066!3.17e-07!25;CL:0000223!9.95e-07!20
|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-07,25;CL:0000223,9.95e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.34e-14!130;UBERON:0000925!3.34e-14!130;UBERON:0006595!3.34e-14!130;UBERON:0001007!5.95e-14!128;UBERON:0001555!5.95e-14!128;UBERON:0007026!5.95e-14!128;UBERON:0004921!5.89e-13!126;UBERON:0004185!5.89e-13!126;UBERON:0000160!3.95e-11!43;UBERON:0000344!3.05e-09!15;UBERON:0005409!1.07e-08!59;UBERON:0001242!4.58e-08!13;UBERON:0000060!4.58e-08!13;UBERON:0001262!4.58e-08!13;UBERON:0004786!4.58e-08!13;UBERON:0003914!3.20e-07!47;UBERON:0000490!3.75e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.28e-14,118;UBERON:0000925,2.28e-14,118;UBERON:0006595,2.28e-14,118;UBERON:0001007,3.94e-14,116;UBERON:0001555,3.94e-14,116;UBERON:0007026,3.94e-14,116;UBERON:0000160,1.66e-13,31;UBERON:0004921,4.03e-13,114;UBERON:0005409,1.27e-09,47;UBERON:0000344,3.05e-09,15;UBERON:0001242,4.58e-08,13;UBERON:0001262,4.58e-08,13;UBERON:0004786,4.58e-08,13;UBERON:0003914,3.20e-07,47;UBERON:0000490,3.75e-07,66
|phase1_expression=63.8993899948128,414.582784275561,381.289362608431,321.216992407854,268.480111251242,193.396921242497,226.837874018255,80.3147071806604,62.087826468885,59.6864542121083,77.9041755426048,73.3903862757095,91.2499890533327,79.5525662012876,43.3042690360362,36.2430728627788,35.6776557845355,72.8717601977529,77.6067694208482,77.6633062790395,79.260346420797,73.9717586446595,101.606717975046,313.74514109787,311.30839440815,450.197859866176,411.808468328075,345.615857228166,394.868665630345,377.289104250616,264.081038190468,17.14582818341,25.8327210785519,31.6963362030877,108.897060646231,123.678576146718,104.738879762595,151.926981957498,150.797721493093,202.60368891786,146.469640519723,152.319143145733,152.935761204813,77.6783366909312,75.9313214834164,65.709737273882,46.9434806608824,66.9337230087971,68.1027166476863,90.7987628676903,86.9315678293501,63.2511283205875,77.3477813926165,107.353597017679,107.886109524731,111.136076367529,114.899909415441,107.259795193708,31.9660008158165,35.9713865904982,41.8328726314078,47.0993899576094,57.8041617472241,53.5440331782432,55.3765163037506,39.7868864369816,38.0492140358374,23.8215349299364,34.4249512864146,33.616478644591,38.2791429659515,41.4193927385515,39.5354688303388,30.2552274060936,30.1913233707445,32.1726575313507,57.2602581196821,54.5224933623752,54.9911389057352,35.2136388239618,34.9482798561205,28.129322010065,56.6741487972803,28.7008931116157,44.4642901030517,45.0781735774712,38.2979821349587,33.9246991402047,59.5965141532158,71.9441252216598,74.4951735963312,264.150130233286,257.709135475237,372.395202230094,510.07448769642,567.202039065227,188.195522976547,87.2603251599656,86.7685255373582,92.5749685217091,53.3796560953619,71.862827352018,43.3168907501298,85.3280043783997,99.3693878241473,99.5704271317137,100.093840112927,256.34280996929,117.298861292169,82.0885029028481,57.423643159591,78.8565588828446,83.9440410012053,84.5554013500213,68.0838614315731,104.805937168949,171.306112639921,172.651632162375,86.6918340910877,64.2214394291214,76.4111653872962,74.185913729689,191.983514054666,50.6510778829977,43.5649150171987,327.495944777414,76.3222343102712,75.5877441051694,79.2918216935924,39.8443100816828,36.6000482254901,12.942398267625,46.7587421317224,31.708716708961,47.7912502486988,40.2358332408039,41.85597854248,66.93095018823,62.927966849985,124.371136828906,62.9782943939486,59.774547152703,59.9606892251813,63.446728308836,56.2661847981481,67.7721580306855,69.1518727250799,99.083390993043,73.0775496042335,62.2159003752125,52.0815327525289,56.9908904311695,54.4972608482172,69.6504333044333,71.6121834699643,45.180778567798,85.6700088522147,82.8660260909383,73.3141828440629,89.8925852804078,90.0580070327409,82.6484862106058,91.1467232003059,92.8727173847746,90.8633294906658,97.6642567951713,112.138281785041,103.921154706781,98.4067902482613,120.663086098135,128.656200749273,130.556588770822,151.050479320243,125.751414378468,41.0065399700048,31.7975252251989,461.595039828366,231.923146963928,61.4270161541474,53.1821978560404,84.0215847820049,112.741090264448,131.647801956163,157.506818421199,283.293849742073,241.778065534848,169.651265940182,191.794039047669,168.44897127092,294.812766038585,278.169670188731,320.816591212786,74.5394850745611,67.6351194649595,72.1329508307715,75.9619452863022,80.2963296873971,76.9389944196795,125.967181951521,202.963953471953,259.047900938268,252.347200220082,358.70767877545,49.8866866091121,48.5500717929611,49.6945268370527,54.9750928962843,63.9119473343905,70.5313609434533,94.0766369464151,113.33252351575,145.792110402871,184.023304355014,178.255513933213,185.350377830049,239.444776293862,329.194253812709,326.614263963,104.570305634298,51.9206468251128,64.6970956474843,60.9384857932925,54.213447354644,71.3576656702135,82.3630997465607,76.2972563123993,87.8027752671484,79.2843588942614,76.0599246496214,85.8643769110467,88.5873956972044,74.2049670523154,113.093462954454,104.973796977011,85.5669835053123,79.1938461894582,60.8486736053732,48.0567915028033,110.000348347749,172.942585134996,75.7219726599016,76.9164326264378,76.4753061951436,66.672294628762,67.5079982469654,75.2983571898294,75.2947905115303,72.4794527620054,80.6387067010908,58.8018009051907,72.6733236266335,27.6001685684246,42.8392703099905,63.0185869755085,118.143173122567,60.4523784025904,55.3252109245494,79.9685538165008,54.9261520758237,81.4703142051408,86.0566216250176,74.1608808134111,67.0215071363276,86.9101084323494,82.226514688499,96.9474106532956,59.5769310069129,55.6388780556749,49.6737345725777,57.8709994585299,56.9262149991698,46.5542613941404,49.5292552012384,26.1839856238555,83.3084563626172,83.2500038494813,83.1392060667206,72.7148375471927,80.7322133479528,85.2221629234842,80.8150768901234,80.264899975335,272.53458224891,55.6275906031529,51.7738768817494,54.4861331422907,64.6328900520294,43.1363766540742,37.1808299401188,43.6966310824458,66.971501417579,66.7568427583849,57.076589181227,186.160770512947,56.3078068574421,65.875507349099,80.7879949347073,86.1443779579611,94.1142649746025,106.677697990393,97.7790381230724,117.004906066861,219.04930486313,84.5021465798219,55.2419079910507,55.4706385823161,47.6520452516441,40.4458471755619,42.1061024537403,47.4766712629087,43.891607253512,49.0870530861692,64.2787781329608,50.2494971318093,59.0461512828624,98.9114807566198,53.7221820518935,65.426879713995,81.5902768300553,85.5747605290561,87.2211147489753,69.7133607215819,79.4569656199225,85.8214824559255,76.8926679148948,78.5435982215988,85.3731035280231,75.7187193709393,89.1770763645371,133.090735182129,88.3504094428777,91.2389921718368,87.803654358413,111.470395756574,90.0875882165674,65.9345847362154,115.544556323616,83.2609692698703,57.6046879469408,49.7151255427751,48.1232231289093,58.0863756321664,46.5856113444037,55.8991484068378,49.2766425169218,36.9263386643861,48.4862377613099,55.9181136691966,67.9807126676357,53.4693330357382,48.1468768226658,50.3230904331369,62.6743356257667,61.5875753307547,74.0081603579379,67.5794987743573,76.6996910924438,69.9971276585719,72.7485590684988,76.9595472855191,67.7964514081949,65.6898063673959,65.4189991404435,78.1121653704241,72.4277037155347,67.9040456032242,66.3458300293324,76.5434384698866,75.088366272406,67.4408063405482,69.3849312746704,77.9056793149281,73.4994261043732,70.7378121974416,68.2321338815442,76.8163557398501,66.2724075567805,69.5816416855596,67.1474202582826,71.6127586870346,71.6154325546956,68.7919574865689,64.2379014567201,42.2179876715129,76.9634991785394,82.5104847545466,86.2710377630484,80.0746851403841,118.948199673276
|short_description=p1@Lypla1
}}

Revision as of 20:28, 13 September 2013

Short description:p1@Lypla1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lypla1_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: 0bp_to_ENSMUST00000115529, ENSMUST00000119612, ENSMUST00000137887, ENSMUST00000150971, ENSMUST00000155020, NM_008866, uc007afg.1, uc007afh.1_5end
EntrezGene:Lypla1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lypla1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G763.90
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5414.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6381.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I3321.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I4268.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7193.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8226.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E980.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E762.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F259.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E677.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F173.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E491.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E879.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A143.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A535.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A272.87
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A477.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A677.66
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A379.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H273.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9101.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1313.75
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2311.31
GP2+ M cell, pool1.CNhs13228.11845-124H9450.20
GP2+ M cell, pool2.CNhs13231.11846-124I1411.81
GP2+ M cell, pool3.CNhs13240.11847-124I2345.62
Ileum epithelium, pool1.CNhs13199.10252-104B9394.87
Ileum epithelium, pool2.CNhs13232.10253-104C1377.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8264.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G625.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5108.90
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6123.68
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7104.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8151.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1150.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3202.60
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9146.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2152.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4152.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D877.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D975.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B365.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.94
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C266.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B868.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C390.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C486.93
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A277.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9107.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1107.89
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1111.14
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5107.26
Mouse Granule cells, donor1.CNhs12131.11713-123C331.97
Mouse Granule cells, donor2.CNhs12357.11731-123E335.97
Mouse Granule cells, donor3.CNhs12108.11636-122C741.83
Mouse Meningeal cells, donor1.CNhs12132.11716-123C647.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D157.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C753.54
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E755.38
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D239.79
Mouse Microglia, donor1.CNhs12629.11718-123C838.05
Mouse Microglia, donor2.CNhs12634.11736-123E823.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.26
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D357.26
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F354.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D754.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E456.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.92
Mouse Schwann, donor1.CNhs12507.11728-123D959.60
Mouse Schwann, donor2.CNhs12573.11746-123F971.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G374.50
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7264.15
Mouse hepatocyte, donor1.CNhs13078.11714-123C4257.71
Mouse hepatocyte, donor3.CNhs12615.11637-122C8372.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F4510.07
Mouse hepatocyte, donor8.CNhs13091.11824-124F6567.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7188.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I787.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E386.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I892.57
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G653.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H171.86
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B685.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G199.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G299.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3100.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6256.34
accessory axillary lymph node, adult.CNhs10475.1063-29H9117.30
adrenal gland, adult.CNhs10508.49-24D782.09
adrenal gland, embryo E14.CNhs11038.406-44C557.42
adrenal gland, embryo E16.CNhs11004.1254-43D678.86
adrenal gland, embryo E17.CNhs11043.1263-45I183.94
adrenal gland, embryo E18.CNhs11026.1262-18F584.56
adrenal gland, neonate N00.CNhs11191.1311-23C168.08
adrenal gland, neonate N25.CNhs11223.1377-27I3104.81
amnion, adult pregnant day17.5.CNhs10488.583-22A8171.31
aorta, adult.CNhs10498.46-23H1172.65
bone (os femoris), adult.CNhs10483.56-12G286.69
bone (os femoris), neonate N02.CNhs11227.1985-43F564.22
bone (os femoris), neonate N16.CNhs11225.1525-43A676.41
bone (os femoris), neonate N20.CNhs11195.1350-25C374.19
cecum, adult.CNhs10467.37-13H4191.98
cerebellum, adult.CNhs10494.15-8B250.65
cerebellum, neonate N30.CNhs11135.1395-42I243.56
colon, adult.CNhs10468.36-18H7327.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C776.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D175.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D479.29
corpora quadrigemina, adult.CNhs10501.16-22A439.84
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D546.76
cortex, neonate N30.CNhs11107.1392-42F231.71
diencephalon, adult.CNhs10482.20-12F247.79
diencephalon, neonate N30.CNhs11201.1388-42B240.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B141.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A266.93
epididymis, adult.CNhs10490.58-23B262.93
eyeball, adult.CNhs10484.31-12G4124.37
eyeball, embryo E12.CNhs11016.345-16C662.98
eyeball, embryo E14.CNhs10521.399-16E259.77
eyeball, embryo E15.CNhs10593.426-16C959.96
eyeball, embryo E17.CNhs11023.1261-18D463.45
eyeball, neonate N00.CNhs11207.633-15C656.27
eyeball, neonate N01.CNhs11140.1532-43E767.77
eyeball, neonate N02.CNhs11205.1551-44G869.15
eyeball, neonate N16.CNhs11188.777-19A299.08
forelimb, embryo E11.CNhs10596.335-25E273.08
forelimb, embryo E12.CNhs10600.359-14H262.22
forelimb, embryo E13.CNhs10589.384-1E252.08
forelimb, embryo E14.CNhs10577.413-26A856.99
forelimb, embryo E15.CNhs11007.437-20E754.50
forelimb, embryo E17.CNhs10598.1517-43C469.65
forelimb, embryo E18.CNhs11008.1520-43B571.61
gonad, embryo E13.CNhs11044.1564-45I645.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C885.67
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D282.87
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D573.31
heart, embryo E11.CNhs10586.331-24E989.89
heart, embryo E12.CNhs11015.353-12F590.06
heart, embryo E13.CNhs11013.376-3I982.65
heart, embryo E14.CNhs10597.403-26D491.15
heart, embryo E15.CNhs11017.431-16C892.87
heart, embryo E16.CNhs11021.457-17C690.86
heart, embryo E17.CNhs11025.479-18E597.66
heart, embryo E18.CNhs11030.1283-20G3112.14
heart, neonate N00.CNhs11213.639-21E3103.92
heart, neonate N03.CNhs11221.1349-25I298.41
heart, neonate N10.CNhs11118.749-24G1120.66
heart, neonate N16.CNhs11209.782-15G1128.66
heart, neonate N20.CNhs11127.821-26I6130.56
heart, neonate N25.CNhs11196.1351-25D3151.05
heart, neonate N30.CNhs11202.1390-42D2125.75
hippocampus, adult.CNhs10478.13-16E841.01
hippocampus, neonate N00.CNhs11228.627-43G131.80
intestinal mucosa, adult.CNhs10506.860-29I3461.60
intestine, adult.CNhs10496.178-9A3231.92
intestine, embryo E12.CNhs11019.1251-16I561.43
intestine, embryo E13.CNhs11010.381-16D553.18
intestine, embryo E15.CNhs10602.976-16D884.02
intestine, embryo E16.CNhs10585.463-22H4112.74
intestine, embryo E17.CNhs10582.482-18D3131.65
intestine, embryo E18.CNhs10526.1289-20F7157.51
intestine, neonate N00.CNhs11126.644-26D1283.29
intestine, neonate N01.CNhs11192.1322-23E9241.78
intestine, neonate N06.CNhs11102.688-20B8169.65
intestine, neonate N07.CNhs11095.720-20F2191.79
intestine, neonate N10.CNhs11098.755-23A5168.45
intestine, neonate N20.CNhs11187.827-18D1294.81
intestine, neonate N25.CNhs11121.1352-25E3278.17
intestine, neonate N30.CNhs11131.1384-42G1320.82
kidney, embryo E14.CNhs10606.411-4I974.54
kidney, embryo E15.CNhs10997.434-16F867.64
kidney, embryo E16.CNhs10584.464-22A572.13
kidney, embryo E17.CNhs11028.483-18I275.96
kidney, embryo E18.CNhs11001.1288-20C780.30
kidney, neonate N00.CNhs11214.646-21G776.94
kidney, neonate N10.CNhs11206.758-6D5125.97
kidney, neonate N20.CNhs11113.832-19I1202.96
kidney, neonate N25.CNhs11122.1353-25F3259.05
kidney, neonate N30.CNhs11203.1385-42H1252.35
liver, adult pregnant day01.CNhs10466.508-5B2358.71
liver, embryo E12.CNhs10601.355-15F849.89
liver, embryo E13.CNhs10524.378-3H648.55
liver, embryo E14.CNhs10594.409-16E149.69
liver, embryo E15.CNhs10520.433-16D754.98
liver, embryo E16.CNhs10523.462-17F563.91
liver, embryo E17.CNhs10510.481-18A370.53
liver, embryo E18.CNhs10579.499-43G494.08
liver, neonate N00.CNhs11117.641-24F4113.33
liver, neonate N03.CNhs11123.1345-25G2145.79
liver, neonate N06.CNhs11101.684-20A8184.02
liver, neonate N07.CNhs11103.716-20H2178.26
liver, neonate N10.CNhs11115.751-24B9185.35
liver, neonate N20.CNhs11220.823-25A3239.44
liver, neonate N25.CNhs11198.1368-26H1329.19
liver, neonate N30.CNhs11106.1382-42D1326.61
lung, adult.CNhs10474.28-22B1104.57
lung, embryo E12.CNhs10522.354-16G251.92
lung, embryo E14.CNhs10604.404-26F864.70
lung, embryo E15.CNhs11020.432-17C560.94
lung, embryo E16.CNhs10998.458-17B654.21
lung, embryo E17.CNhs10605.480-44A671.36
lung, embryo E18.CNhs10583.1287-20I682.36
lung, neonate N00.CNhs11224.640-42C676.30
lung, neonate N06.CNhs11212.683-20E587.80
lung, neonate N07.CNhs11111.715-19A379.28
lung, neonate N10.CNhs11219.750-23E676.06
lung, neonate N20.CNhs11109.822-18A485.86
lung, neonate N25.CNhs11119.1359-25C788.59
lung, neonate N30.CNhs11133.1394-42H274.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1113.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1104.97
mammary gland, adult lactating day02.CNhs10480.595-22B685.57
mammary gland, adult pregnant day19.CNhs10476.588-5H279.19
medulla oblongata, adult.CNhs10477.17-12C260.85
medulla oblongata, neonate N30.CNhs11200.1396-42A348.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7110.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2172.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E175.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E276.92
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E376.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D766.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D867.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D975.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D475.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D572.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D680.64
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I772.67
ovary, embryo E18.CNhs11040.505-44H727.60
ovary, neonate N00.CNhs11217.1299-22I442.84
oviduct, adult pregnant day01.CNhs10500.988-6G663.02
pancreas, adult.CNhs10486.34-16E4118.14
pancreas, embryo E14.CNhs11012.405-44F460.45
pancreas, embryo E15.CNhs11042.1556-45F255.33
pancreas, embryo E16.CNhs11003.460-26E579.97
pancreas, embryo E17.CNhs10599.1558-45G354.93
pancreas, embryo E18.CNhs10580.1535-43I781.47
pancreas, neonate N00.CNhs11105.645-26G986.06
pancreas, neonate N01.CNhs11138.1531-43D774.16
pancreas, neonate N02.CNhs11139.1539-43D867.02
pancreas, neonate N16.CNhs11136.787-43B686.91
pancreas, neonate N25.CNhs11094.1555-45E282.23
pancreas, neonate N30.CNhs11182.1548-44H596.95
pituitary gland, adult.CNhs10493.21-1G859.58
pituitary gland, embryo E12.CNhs11018.346-16E655.64
pituitary gland, embryo E13.CNhs11009.370-44C749.67
pituitary gland, embryo E14.CNhs11037.398-44A557.87
pituitary gland, embryo E15.CNhs10592.427-16B956.93
pituitary gland, embryo E16.CNhs11036.449-43F646.55
pituitary gland, embryo E17.CNhs11039.1265-44F549.53
pituitary gland, neonate N00.CNhs11190.1308-22E926.18
placenta, adult pregnant day10.CNhs10472.539-13I783.31
placenta, adult pregnant day17.CNhs10464.577-18G383.25
prostate, adult.CNhs10470.859-1F883.14
skin, adult.CNhs10492.30-1C372.71
skin, neonate N00.CNhs11124.650-25G480.73
skin, neonate N03.CNhs11215.662-22H385.22
skin, neonate N06.CNhs11097.693-20I580.82
skin, neonate N10.CNhs11108.762-6C480.26
small intestine, neonate N16.CNhs11114.790-21I1272.53
spinal cord, adult.CNhs10505.24-13C955.63
spleen, adult.CNhs10465.25-2G251.77
spleen, embryo E16.CNhs11035.461-43C154.49
spleen, embryo E18.CNhs11011.1271-21F264.63
spleen, neonate N10.CNhs11116.752-24D143.14
spleen, neonate N20.CNhs11112.824-19H137.18
spleen, neonate N25.CNhs11099.1354-25G343.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C666.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C966.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D357.08
stomach, adult.CNhs10503.33-1H6186.16
stomach, embryo E12.CNhs10588.356-43E356.31
stomach, embryo E15.CNhs10603.1252-16G865.88
stomach, embryo E16.CNhs11022.459-17D480.79
stomach, embryo E17.CNhs11006.1035-18D586.14
stomach, embryo E18.CNhs10999.1286-20C694.11
stomach, neonate N03.CNhs11193.1340-24B8106.68
stomach, neonate N07.CNhs11210.718-18A997.78
stomach, neonate N25.CNhs11104.1355-25E4117.00
stomach, neonate N30.CNhs11134.1386-42I1219.05
submandibular gland, adult.CNhs10469.59-29C184.50
testis, adult.CNhs10504.57-7G555.24
testis, embryo E13.CNhs11031.389-23F555.47
testis, embryo E15.CNhs11034.443-27C547.65
testis, embryo E16.CNhs11033.470-26G540.45
testis, embryo E17.CNhs11029.486-18I542.11
testis, embryo E18.CNhs11027.503-18G547.48
testis, neonate N00.CNhs11189.1300-22B743.89
testis, neonate N07.CNhs11222.726-26I449.09
testis, neonate N10.CNhs11204.763-44D964.28
testis, neonate N20.CNhs11110.839-18H350.25
testis, neonate N30.CNhs11130.1391-42E259.05
thymus, adult.CNhs10471.38-12B598.91
thymus, embryo E14.CNhs11041.402-44I453.72
thymus, embryo E15.CNhs11005.430-45I265.43
thymus, embryo E16.CNhs11002.456-26C581.59
thymus, embryo E17.CNhs10581.478-18C185.57
thymus, embryo E18.CNhs10595.1273-19G487.22
thymus, neonate N02.CNhs11181.1541-43F869.71
thymus, neonate N03.CNhs11137.2104-43C779.46
thymus, neonate N06.CNhs11197.681-26C485.82
thymus, neonate N07.CNhs11211.713-19D376.89
thymus, neonate N10.CNhs11194.748-24E478.54
thymus, neonate N20.CNhs11186.820-7A285.37
thymus, neonate N25.CNhs11125.1362-25G775.72
thymus, neonate N30.CNhs11132.1393-42G289.18
tongue, adult.CNhs10499.32-1B4133.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H388.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F791.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G587.80
urinary bladder, adult.CNhs10481.879-12E4111.47
uterus, adult pregnant day19.CNhs10497.590-15F590.09
uterus, adult.CNhs10509.92-27E565.93
vagina, adult.CNhs10502.89-27D5115.54
vesicular gland, adult.CNhs10491.51-27F883.26
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A249.72
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A446.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.90
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A955.92
whole body, embryo E11.CNhs11014.324-5I867.98
whole body, embryo E12.CNhs10587.857-27C953.47
whole body, embryo E13.CNhs10512.372-23H248.15
whole body, embryo E14.5.CNhs10578.420-27D250.32
whole body, embryo E14.CNhs10519.395-14B162.67
whole body, embryo E16.CNhs10514.453-14F261.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G567.58
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G576.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G570.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G572.75
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G576.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G567.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G565.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G565.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G578.11
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G572.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G567.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G566.35
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G576.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G575.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G567.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G569.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G577.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G573.50
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G570.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G568.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G576.82
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G566.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G569.58
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G567.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G571.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G571.62
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G568.79
whole body, embryo E17.5.CNhs10513.490-9F964.24
whole body, embryo E17.CNhs10517.475-3I542.22
whole body, embryo E18.CNhs10516.493-3B376.96
whole body, neonate N00.CNhs10525.657-19C282.51
whole body, neonate N01.CNhs10576.659-23C686.27
whole body, neonate N06.CNhs10515.692-21D180.07
whole body, neonate N10.CNhs10518.761-6B4118.95





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.17e-0725
endodermal cell9.95e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.28e-14118
endoderm2.28e-14118
presumptive endoderm2.28e-14118
digestive system3.94e-14116
digestive tract3.94e-14116
primitive gut3.94e-14116
intestine1.66e-1331
subdivision of digestive tract4.03e-13114
gastrointestinal system1.27e-0947
mucosa3.05e-0915
intestinal mucosa4.58e-0813
wall of intestine4.58e-0813
gastrointestinal system mucosa4.58e-0813
epithelial tube3.20e-0747
unilaminar epithelium3.75e-0766







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