FFCP PHASE1:Mm9::chr2:10002202..10002222,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16588|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142599_5end|description=CAGE_peak_2_at_Kin_5end|id=chr2:10002202..10002222,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.51e-11!130;UBERON:0000925!1.51e-11!130;UBERON:0006595!1.51e-11!130;UBERON:0004921!5.34e-11!126;UBERON:0004185!5.34e-11!126;UBERON:0001007!6.93e-11!128;UBERON:0001555!6.93e-11!128;UBERON:0007026!6.93e-11!128;UBERON:0005409!2.94e-07!59;UBERON:0000077!3.52e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-11,118;UBERON:0000925,1.29e-11,118;UBERON:0006595,1.29e-11,118;UBERON:0004921,4.40e-11,114;UBERON:0001007,5.99e-11,116;UBERON:0001555,5.99e-11,116;UBERON:0007026,5.99e-11,116;UBERON:0005409,6.45e-08,47|phase1_expression=8.80818659076367,14.3079917132138,9.09998478779072,16.6355316218757,16.5295590882295,9.40123922706583,11.6806320297763,15.236552166106,6.61706994112834,6.31974221069382,9.41698825240277,9.49288692044503,15.4080656938085,15.1237296184865,6.66219523631325,25.5118836911181,25.1842276126133,10.567982539501,13.4372144933624,12.7316895539409,7.73893940374735,11.1205865344992,3.6567970479451,11.5194544411253,9.1763712426868,12.6331032105304,9.04600191934057,10.3426191689227,17.4821545899864,12.0974462284767,10.199603490144,8.25539875497521,5.53558308826113,0,8.95440021228951,5.48574329683025,8.98345167554424,28.0416192593728,14.8453715459522,22.5115209908733,22.9410280332096,21.1744100337118,25.7320487106511,11.5825072537531,9.83356232829291,7.70896359079063,6.25913075478431,1.09012578190223,1.75748946187577,0.972149495371417,2.93971485413261,2.87505128729943,11.0736519998106,7.97898356212479,7.73015738027667,8.48956138918625,6.87680255853016,10.3134418455488,4.24864567805155,5.28990979272033,4.43681982454325,1.35537812827653,2.66788438833342,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.768436610643109,7.56934169851887,4.99521971827255,4.83747411108179,0.856952953211411,3.75476519617743,6.98197555525238,4.88811902193005,2.75765635983006,1.10115880999389,5.2351808614927,6.91229399653096,4.3522474950964,4.02545631850602,3.64639359389732,3.62937898701795,2.8138130501584,5.50073691996516,6.18720029494702,5.26775218956681,4.65998614563251,9.69295274664756,11.5624486963382,7.8263411949453,6.0229671388697,11.5595126730318,9.17495425784289,7.79731700937203,5.37632264516803,12.6399978118577,8.18065548374677,8.83272415649754,4.94675404314476,6.90132756905734,5.13305909657271,5.09610479413291,0,8.87613268145978,11.6545538118545,11.1215377903252,10.2765491747154,19.9382170408322,9.64873903921361,9.1947223186052,10.3518262626128,8.07154240396205,13.2635923686308,10.2302175208063,8.67099480174761,21.2587672251562,17.930320258069,25.6537060065464,9.22071044700232,10.1587098491781,20.8496358848145,22.3670113461747,14.0534782565543,13.1951425292477,13.2837668708468,6.58983184782562,5.39912457894067,5.97230067243404,9.8861822007183,10.0650132620098,9.92669381691629,8.8650403298061,8.43861009190091,11.2205544062162,9.40999325792994,8.45266719957625,15.0532434438213,6.31806896084187,18.0979996062368,15.354212269599,12.644615743841,9.54329287968351,13.1113191517072,9.93332887609387,10.1209839025031,10.4945931506896,11.1242449417777,9.26942369611222,11.7245769704048,7.74184946321375,9.86380795924087,13.9023624612799,12.8853301613202,16.2567887762275,11.9420560091096,3.51106593656617,8.23513302767089,6.25159698670304,9.94203708170409,14.540615718828,11.704033994966,10.8902578369197,10.8220327461072,10.7986979021165,10.6965614585188,7.51165523918934,10.9759421825139,10.5318303944627,11.3275550214576,12.2413902414242,11.1111990443253,13.8316572633362,12.6154033634749,9.2527577368216,8.95270127699774,19.1642894130603,16.1314845664762,13.4371597837197,13.237490296045,10.9537342123779,12.5043785266472,12.6755484991576,8.3699275489526,13.7613427847908,9.22314146454461,11.8127548136127,12.7332142106337,13.6474860983384,16.178749355776,15.561939590978,14.7364542208232,6.06937283049861,12.6815848996799,14.6520056375005,11.2008230314923,11.6371492300575,9.8190147846446,10.0546094027569,13.8753539100826,12.8738956829927,10.2419646055094,9.48648406678877,18.5198067344864,15.7247196090562,17.5392447660186,16.8373900752457,19.7765270996982,16.2960545140109,15.247895284893,15.4028465436284,10.158772287959,10.0637744569148,10.0478055870496,8.7370548472077,9.85057623993736,11.1226396383586,8.68398338454061,11.2699446001629,8.14813070613084,11.0816183980578,11.2031756611624,15.0201758904641,14.0705256251125,17.139142143793,10.9274842800367,14.9753386900881,13.2878813789265,12.9158362612565,12.4536119183961,11.3972088031491,11.8612228036839,7.53956419696361,6.52686820582452,10.3270497333998,13.5209005689319,11.7201930691088,9.25972324078405,10.1639666133539,11.3611917241968,10.0962630213202,11.3227235846025,7.32439552291516,11.709471099675,10.6943363559549,7.9261428620873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| ||
|EntrezGene=16588 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000142599_5end | |||
|description=CAGE_peak_2_at_Kin_5end | |||
|id=chr2:10002202..10002222,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.51e-11!130;UBERON:0000925!1.51e-11!130;UBERON:0006595!1.51e-11!130;UBERON:0004921!5.34e-11!126;UBERON:0004185!5.34e-11!126;UBERON:0001007!6.93e-11!128;UBERON:0001555!6.93e-11!128;UBERON:0007026!6.93e-11!128;UBERON:0005409!2.94e-07!59;UBERON:0000077!3.52e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-11,118;UBERON:0000925,1.29e-11,118;UBERON:0006595,1.29e-11,118;UBERON:0004921,4.40e-11,114;UBERON:0001007,5.99e-11,116;UBERON:0001555,5.99e-11,116;UBERON:0007026,5.99e-11,116;UBERON:0005409,6.45e-08,47 | |||
|phase1_expression=8.80818659076367,14.3079917132138,9.09998478779072,16.6355316218757,16.5295590882295,9.40123922706583,11.6806320297763,15.236552166106,6.61706994112834,6.31974221069382,9.41698825240277,9.49288692044503,15.4080656938085,15.1237296184865,6.66219523631325,25.5118836911181,25.1842276126133,10.567982539501,13.4372144933624,12.7316895539409,7.73893940374735,11.1205865344992,3.6567970479451,11.5194544411253,9.1763712426868,12.6331032105304,9.04600191934057,10.3426191689227,17.4821545899864,12.0974462284767,10.199603490144,8.25539875497521,5.53558308826113,0,8.95440021228951,5.48574329683025,8.98345167554424,28.0416192593728,14.8453715459522,22.5115209908733,22.9410280332096,21.1744100337118,25.7320487106511,11.5825072537531,9.83356232829291,7.70896359079063,6.25913075478431,1.09012578190223,1.75748946187577,0.972149495371417,2.93971485413261,2.87505128729943,11.0736519998106,7.97898356212479,7.73015738027667,8.48956138918625,6.87680255853016,10.3134418455488,4.24864567805155,5.28990979272033,4.43681982454325,1.35537812827653,2.66788438833342,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0.768436610643109,7.56934169851887,4.99521971827255,4.83747411108179,0.856952953211411,3.75476519617743,6.98197555525238,4.88811902193005,2.75765635983006,1.10115880999389,5.2351808614927,6.91229399653096,4.3522474950964,4.02545631850602,3.64639359389732,3.62937898701795,2.8138130501584,5.50073691996516,6.18720029494702,5.26775218956681,4.65998614563251,9.69295274664756,11.5624486963382,7.8263411949453,6.0229671388697,11.5595126730318,9.17495425784289,7.79731700937203,5.37632264516803,12.6399978118577,8.18065548374677,8.83272415649754,4.94675404314476,6.90132756905734,5.13305909657271,5.09610479413291,0,8.87613268145978,11.6545538118545,11.1215377903252,10.2765491747154,19.9382170408322,9.64873903921361,9.1947223186052,10.3518262626128,8.07154240396205,13.2635923686308,10.2302175208063,8.67099480174761,21.2587672251562,17.930320258069,25.6537060065464,9.22071044700232,10.1587098491781,20.8496358848145,22.3670113461747,14.0534782565543,13.1951425292477,13.2837668708468,6.58983184782562,5.39912457894067,5.97230067243404,9.8861822007183,10.0650132620098,9.92669381691629,8.8650403298061,8.43861009190091,11.2205544062162,9.40999325792994,8.45266719957625,15.0532434438213,6.31806896084187,18.0979996062368,15.354212269599,12.644615743841,9.54329287968351,13.1113191517072,9.93332887609387,10.1209839025031,10.4945931506896,11.1242449417777,9.26942369611222,11.7245769704048,7.74184946321375,9.86380795924087,13.9023624612799,12.8853301613202,16.2567887762275,11.9420560091096,3.51106593656617,8.23513302767089,6.25159698670304,9.94203708170409,14.540615718828,11.704033994966,10.8902578369197,10.8220327461072,10.7986979021165,10.6965614585188,7.51165523918934,10.9759421825139,10.5318303944627,11.3275550214576,12.2413902414242,11.1111990443253,13.8316572633362,12.6154033634749,9.2527577368216,8.95270127699774,19.1642894130603,16.1314845664762,13.4371597837197,13.237490296045,10.9537342123779,12.5043785266472,12.6755484991576,8.3699275489526,13.7613427847908,9.22314146454461,11.8127548136127,12.7332142106337,13.6474860983384,16.178749355776,15.561939590978,14.7364542208232,6.06937283049861,12.6815848996799,14.6520056375005,11.2008230314923,11.6371492300575,9.8190147846446,10.0546094027569,13.8753539100826,12.8738956829927,10.2419646055094,9.48648406678877,18.5198067344864,15.7247196090562,17.5392447660186,16.8373900752457,19.7765270996982,16.2960545140109,15.247895284893,15.4028465436284,10.158772287959,10.0637744569148,10.0478055870496,8.7370548472077,9.85057623993736,11.1226396383586,8.68398338454061,11.2699446001629,8.14813070613084,11.0816183980578,11.2031756611624,15.0201758904641,14.0705256251125,17.139142143793,10.9274842800367,14.9753386900881,13.2878813789265,12.9158362612565,12.4536119183961,11.3972088031491,11.8612228036839,7.53956419696361,6.52686820582452,10.3270497333998,13.5209005689319,11.7201930691088,9.25972324078405,10.1639666133539,11.3611917241968,10.0962630213202,11.3227235846025,7.32439552291516,11.709471099675,10.6943363559549,7.92614286208731,7.69140333182299,11.9824901743638,13.0444966722353,8.9969968598106,10.0777460497871,11.2181330310371,10.0989914799217,12.3727592229402,13.2745138339963,12.867373716214,9.67435382287203,10.9390946258421,8.85905678642318,11.6825356218692,14.4719844174204,10.1789444253702,6.77345018930971,13.2735438333043,9.48767477174989,9.28219889233682,15.6602218646742,9.54323798365944,7.50280365939976,7.93047029616891,10.6404140185364,16.4099312193905,14.1512157717824,5.17590413494819,14.0803024838226,14.8282449604674,13.2317038832977,19.2916915941532,13.8859406958479,13.7513468836195,13.7278195603607,13.459553779095,16.9058885245313,9.08583979851498,17.0870880797853,9.08102219038179,18.7046472643409,28.8203739217177,25.4251263561107,24.4792645330979,6.28920190977265,7.41742697315387,6.08079884739465,22.9120948323627,10.9135917785492,11.7925290933572,14.6887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| |||
|short_description=p2@Kin | |||
}} |
Revision as of 21:24, 13 September 2013
Short description: | p2@Kin |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kin_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000142599_5end |
EntrezGene: | Kin |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.29e-11 | 118 |
endoderm | 1.29e-11 | 118 |
presumptive endoderm | 1.29e-11 | 118 |
subdivision of digestive tract | 4.40e-11 | 114 |
digestive system | 5.99e-11 | 116 |
digestive tract | 5.99e-11 | 116 |
primitive gut | 5.99e-11 | 116 |
gastrointestinal system | 6.45e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.