FFCP PHASE1:Hg19::chr6:75808553..75808557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C423|description=CAGE_peak_at_chr6:75808553..75808557,-|id=chr6:75808553..75808557,-|ontology_enrichment_celltype=CL:0000057!1.77e-22!75;CL:0002620!6.91e-19!23;CL:0002334!1.18e-12!12;CL:0000136!1.65e-12!15;CL:0000055!2.62e-12!180;CL:0002580!6.59e-11!3;CL:0002615!1.55e-10!3;CL:0002579!1.87e-10!3;CL:0000135!5.47e-10!3;CL:0000386!5.47e-10!3;CL:0000388!5.47e-10!3;CL:0002320!2.01e-09!365;CL:0000134!3.32e-09!358;CL:0000499!3.56e-09!27;CL:0000219!5.42e-08!390;CL:0002617!8.37e-08!2;CL:0000048!2.38e-07!430;CL:0000723!4.38e-07!436;CL:0002371!6.88e-07!591;CL:0000034!9.60e-07!444|ontology_enrichment_celltype_v019=CL:0002580;5.36e-33;3!CL:0002334;2.27e-31;12!CL:0002617;1.85e-22;2!CL:0000136;2.53e-20;13!CL:0002615;3.46e-15;3!CL:0002579;6.10e-15;3!CL:0002581;1.19e-11;1!CL:0000138;8.41e-08;6|ontology_enrichment_celltype_v019_2=CL:0002580,5.98e-33,3;CL:0002334,2.04e-31,12;CL:0002617,1.66e-22,2;CL:0000136,1.26e-17,15;CL:0002615,3.46e-15,3;CL:0002579,5.68e-15,3;CL:0000057,2.05e-12,76;CL:0002581,9.61e-12,1;CL:0000058,1.03e-07,6;CL:0000138,1.03e-07,6;CL:0000134,4.25e-07,354;CL:0002320,6.57e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!2.44e-14!5;DOID:450!2.44e-14!5;DOID:66!2.44e-14!5;DOID:423!2.44e-14!5;DOID:0080000!2.44e-14!5;DOID:11722!2.44e-14!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.86e-19!6;UBERON:0002358!2.86e-19!6;UBERON:0003684!2.86e-19!6;UBERON:0001178!2.86e-19!6;UBERON:0004457!2.12e-12!12;UBERON:0000042!2.12e-12!12;UBERON:0002097!2.83e-11!40;UBERON:0000043!5.47e-10!3;UBERON:0002199!1.15e-09!45;UBERON:0002416!1.15e-09!45;UBERON:0002384!1.64e-09!375;UBERON:0004923!1.67e-08!57;UBERON:0000310!2.91e-08!10;UBERON:0001443!1.82e-07!11|ontology_enrichment_uberon_v019=UBERON:0003688;2.33e-28;6!UBERON:0002358;2.33e-28;6!UBERON:0003684;2.33e-28;6!UBERON:0001178;2.33e-28;6!UBERON:0000310;7.49e-27;10!UBERON:0001443;2.06e-24;11!UBERON:0004457;5.07e-19;9!UBERON:0000042;5.07e-19;9|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.18e-28,6;UBERON:0002358,2.18e-28,6;UBERON:0003684,2.18e-28,6;UBERON:0001178,2.18e-28,6;UBERON:0000310,7.50e-27,10;UBERON:0001443,2.06e-24,11;UBERON:0004457,2.37e-14,12;UBERON:0000042,2.37e-14,12|phase1_expression=2.54349730978779,3.42560838225573,2.81908808191942,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,1.01392563272577,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.211931901159562,0.900273288253207,0.206105058476878,1.03056216018252,0.558350568994769,1.0126579934476,0.584622030967192,0,0.0920498986422993,0.646584227275248,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.473107245101804,0.585707074963566,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,4.71404834855676,7.05925077125087,2.24528075546459,0.896974044789907,2.04682899626681,1.76939313257968,1.48418066444991,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67268212749375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C423 | |||
|description=CAGE_peak_at_chr6:75808553..75808557,- | |||
|id=chr6:75808553..75808557,- | |||
|ontology_enrichment_celltype=CL:0000057!1.77e-22!75;CL:0002620!6.91e-19!23;CL:0002334!1.18e-12!12;CL:0000136!1.65e-12!15;CL:0000055!2.62e-12!180;CL:0002580!6.59e-11!3;CL:0002615!1.55e-10!3;CL:0002579!1.87e-10!3;CL:0000135!5.47e-10!3;CL:0000386!5.47e-10!3;CL:0000388!5.47e-10!3;CL:0002320!2.01e-09!365;CL:0000134!3.32e-09!358;CL:0000499!3.56e-09!27;CL:0000219!5.42e-08!390;CL:0002617!8.37e-08!2;CL:0000048!2.38e-07!430;CL:0000723!4.38e-07!436;CL:0002371!6.88e-07!591;CL:0000034!9.60e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002580;5.36e-33;3!CL:0002334;2.27e-31;12!CL:0002617;1.85e-22;2!CL:0000136;2.53e-20;13!CL:0002615;3.46e-15;3!CL:0002579;6.10e-15;3!CL:0002581;1.19e-11;1!CL:0000138;8.41e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,5.98e-33,3;CL:0002334,2.04e-31,12;CL:0002617,1.66e-22,2;CL:0000136,1.26e-17,15;CL:0002615,3.46e-15,3;CL:0002579,5.68e-15,3;CL:0000057,2.05e-12,76;CL:0002581,9.61e-12,1;CL:0000058,1.03e-07,6;CL:0000138,1.03e-07,6;CL:0000134,4.25e-07,354;CL:0002320,6.57e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.44e-14!5;DOID:450!2.44e-14!5;DOID:66!2.44e-14!5;DOID:423!2.44e-14!5;DOID:0080000!2.44e-14!5;DOID:11722!2.44e-14!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.86e-19!6;UBERON:0002358!2.86e-19!6;UBERON:0003684!2.86e-19!6;UBERON:0001178!2.86e-19!6;UBERON:0004457!2.12e-12!12;UBERON:0000042!2.12e-12!12;UBERON:0002097!2.83e-11!40;UBERON:0000043!5.47e-10!3;UBERON:0002199!1.15e-09!45;UBERON:0002416!1.15e-09!45;UBERON:0002384!1.64e-09!375;UBERON:0004923!1.67e-08!57;UBERON:0000310!2.91e-08!10;UBERON:0001443!1.82e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.33e-28;6!UBERON:0002358;2.33e-28;6!UBERON:0003684;2.33e-28;6!UBERON:0001178;2.33e-28;6!UBERON:0000310;7.49e-27;10!UBERON:0001443;2.06e-24;11!UBERON:0004457;5.07e-19;9!UBERON:0000042;5.07e-19;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.18e-28,6;UBERON:0002358,2.18e-28,6;UBERON:0003684,2.18e-28,6;UBERON:0001178,2.18e-28,6;UBERON:0000310,7.50e-27,10;UBERON:0001443,2.06e-24,11;UBERON:0004457,2.37e-14,12;UBERON:0000042,2.37e-14,12 | |||
|phase1_expression=2.54349730978779,3.42560838225573,2.81908808191942,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,1.01392563272577,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.211931901159562,0.900273288253207,0.206105058476878,1.03056216018252,0.558350568994769,1.0126579934476,0.584622030967192,0,0.0920498986422993,0.646584227275248,1.77504796258307,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.473107245101804,0.585707074963566,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,4.71404834855676,7.05925077125087,2.24528075546459,0.896974044789907,2.04682899626681,1.76939313257968,1.48418066444991,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67268212749375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22538230705385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:75808553..75808557,- | |||
}} |
Revision as of 21:50, 13 September 2013
Short description: | p@chr6:75808553..75808557, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:75808553..75808557, - |
Coexpression cluster: | C423_Preadipocyte_Adipocyte_Chondrocyte_tenocyte_Osteoblast_Synoviocyte_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 5.98e-33 | 3 |
preadipocyte | 2.04e-31 | 12 |
adipocyte of breast | 1.66e-22 | 2 |
fat cell | 1.26e-17 | 15 |
adipocyte of omentum tissue | 3.46e-15 | 3 |
omentum preadipocyte | 5.68e-15 | 3 |
fibroblast | 2.05e-12 | 76 |
perirenal preadipocyte | 9.61e-12 | 1 |
chondroblast | 1.03e-07 | 6 |
chondrocyte | 1.03e-07 | 6 |
mesenchymal cell | 4.25e-07 | 354 |
connective tissue cell | 6.57e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.18e-28 | 6 |
peritoneum | 2.18e-28 | 6 |
abdominal cavity | 2.18e-28 | 6 |
visceral peritoneum | 2.18e-28 | 6 |
breast | 7.50e-27 | 10 |
chest | 2.06e-24 | 11 |
cavity lining | 2.37e-14 | 12 |
serous membrane | 2.37e-14 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.