FFCP PHASE1:Mm9::chr2:30837499..30837514,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=74270|HGNC=|MCL_coexpression_id=0|UniProt=Q8C6M1|association_with_transcript=-284bp_to_ENSMUST00000102849,NM_028846,uc008jde.2_5end|description=CAGE_peak_9_at_Usp20_5end|id=chr2:30837499..30837514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!4.77e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.527545150920775,0.274462930807229,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0.459804208866946,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,15.2197093444731,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0.314578033277133,4.83168241652012,4.03242008761012,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p9@Usp20}} | ||
|EntrezGene=74270 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8C6M1 | |||
|association_with_transcript=-284bp_to_ENSMUST00000102849,NM_028846,uc008jde.2_5end | |||
|description=CAGE_peak_9_at_Usp20_5end | |||
|id=chr2:30837499..30837514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!4.77e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0.527545150920775,0.274462930807229,0,0,0,0,0.294628585473668,0,0.372798891650601,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0.459804208866946,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,15.2197093444731,0,0.165458490457098,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0.314578033277133,4.83168241652012,4.03242008761012,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p9@Usp20 | |||
}} |
Revision as of 23:42, 13 September 2013
Short description: | p9@Usp20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Usp20_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -284bp_to_ENSMUST00000102849, NM_028846, uc008jde.2_5end |
EntrezGene: | Usp20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.28e-15 | 14 |
male reproductive organ | 5.35e-14 | 15 |
male organism | 3.50e-13 | 16 |
male reproductive system | 3.50e-13 | 16 |
external genitalia | 1.84e-12 | 17 |
indifferent external genitalia | 1.84e-12 | 17 |
indifferent gonad | 1.84e-12 | 17 |
gonad | 8.03e-12 | 18 |
gonad primordium | 8.03e-12 | 18 |
reproductive organ | 4.35e-09 | 24 |
reproductive structure | 1.87e-08 | 26 |
reproductive system | 1.87e-08 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.