FFCP PHASE1:Mm9::chr2:72818459..72818528,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20687|HGNC=|UniProt=O70494|association_with_transcript=0bp_to_ENSMUST00000066003,ENSMUST00000102689,NM_001018042,uc008kcc.1_5end|description=CAGE_peak_3_at_Sp3_5end|id=chr2:72818459..72818528,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.84e-08!94;UBERON:0004177!1.98e-07!29;UBERON:0007811!3.50e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.93e-07,43;UBERON:0004177,1.93e-07,29;UBERON:0005057,1.93e-07,29|phase1_expression=1.92178616525753,2.09385244583617,3.63999391511629,2.41971369045464,6.01074875935617,2.85394762250213,4.67225281191051,17.6898953114959,7.60259099619,5.14941957908386,5.47897498321616,7.17949430958028,15.4080656938085,14.4243663991346,16.3223783289675,18.0202987976945,25.8837894907414,19.0854610041734,14.1227866613911,14.429248161133,7.99406927420056,7.34753038886551,2.35079810225042,5.75972722056264,4.81759490241057,1.14846392823004,2.58457197695445,2.15471232685889,8.17100703662408,5.04060259519861,3.10422714917427,5.71527606113668,6.1506478758457,15.8481681015439,1.1554064790051,1.49611180822643,2.6542016314108,5.02237956884289,3.906676722619,2.09409497589519,4.1176204162171,2.04913645487534,4.85510353031154,3.02152363141385,3.64956952390252,1.65192076945513,1.56478268869608,1.30815093828268,1.09843091367236,1.94429899074283,1.25987779462826,2.87505128729943,4.02678254538567,7.25362142011344,12.0993767691287,2.05807548828758,0.85960031981627,3.6097046459421,13.9598357993122,9.52183762689659,8.87363964908651,1.35537812827653,0.889294796111139,1.3498495759221,1.97773272513395,4.9733608046227,1.49800055259202,1.15265491596466,17.9383029293666,13.6355997715008,17.0363218694619,4.85606673486466,3.75476519617743,16.9037302916637,10.543001812006,12.8690630125403,8.8092704799511,7.91661496128164,5.68344173048101,13.9799464994005,10.9785172322892,16.1483144872596,7.2587579740359,6.75315132038016,5.50073691996516,8.2496003932627,8.96941589034349,13.7935589910722,3.93776205332557,4.38315048619356,4.92769630792852,0.860423876981386,5.439770669662,4.85732872474035,3.24888208723835,4.92829575807069,7.3031098468511,2.89731548382698,1.81850203222008,1.7666978725517,2.39433813620357,3.84979432242953,5.09610479413291,0,4.76280290224671,6.08063677140237,5.05524445014783,5.709193985953,4.91981978929626,4.60170631100957,6.24547176358089,3.65358573974569,3.22861696158482,2.71300752994721,5.17390311397101,2.89033160058254,7.41584903203122,2.74738778147832,6.19227386364912,5.82360659810673,13.2504911076236,11.6370060752453,3.72783522436244,15.2246014446005,10.8912287542997,8.17462576667492,2.27648736561249,0,1.14363204365758,5.54225365797844,8.23501085073528,13.3193613239636,5.38855392596057,7.41574826257959,7.48036960414416,5.51620294430376,4.27725328171328,9.20611582514688,6.31806896084187,8.20723237957248,7.67710613479952,6.20735681970377,10.2635413989049,10.5493372485001,9.72921937863988,10.5053250633577,12.7434345401231,8.2785078636485,14.4430555265004,10.7790465695657,10.9089696981648,8.54863356467542,7.78532297831674,6.268538997399,6.58502836505419,6.56813080501028,1.40442637462647,2.57347907114715,3.6941254921427,6.00664740352955,5.39409937956521,4.32148947506436,4.49814997611899,5.1158700254325,4.78228049950873,4.18561100550734,5.09719462659276,3.15266424391358,1.81015834904829,3.94001913789829,2.83740833410495,3.36259971078264,4.61055242111206,4.69722465661301,4.83666881697493,8.64398743985989,3.63460661282178,3.96675849995316,7.03851226766272,4.18026009348789,6.70110798874885,8.47070803418039,9.78463392917429,6.65789691393957,7.11793592316767,4.94096864172033,4.52403375840485,4.77495532898762,3.50935356814416,10.7858329038507,6.26800344636613,5.97423819763102,3.60369011810855,8.3401414205102,4.50830942692322,7.33144780243131,7.17624202520215,6.8031745293609,6.13394410105296,4.42830443938806,5.65195420228949,4.81248939295022,4.74324203339438,14.0149888801519,12.3832166921318,11.4679677316275,13.5916281330297,10.6117950291063,10.4396599230382,11.2201493605816,5.83686816390127,8.51140380883053,8.62609239164127,2.97712758134803,3.74445207737473,4.79899868099512,3.22915344339442,7.23665282045051,4.98833613449833,8.33762211790133,6.84452901056509,5.60158783058121,7.97946844180907,5.86271901046355,9.28370199455454,6.43941037930736,5.51723004371669,6.86540537911202,5.58091690301205,5.57135270033509,6.73471429276993,6.79850575333104,3.01582567878545,1.63171705145613,5.90117127622843,5.51873492609465,4.17431533968259,6.21221938938677,2.78689407140348,3.02965112645248,5.67914794949262,7.41833614163613,7.53981892064796,6.21318874676635,5.12436950389506,6.79383673893198,10.1202675418724,9.64444331107329,7.90575555893047,8.03303291054518,4.68402281187286,3.02711526234334,5.21238269931443,5.27904393512113,3.98235415019888,4.61283208694465,4.83717691143602,7.35559811048003,1.77181135728464,3.99665692327106,2.32585463851399,4.36240475373007,2.85197902707777,4.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| ||
|EntrezGene=20687 | |||
|HGNC= | |||
|UniProt=O70494 | |||
|association_with_transcript=0bp_to_ENSMUST00000066003,ENSMUST00000102689,NM_001018042,uc008kcc.1_5end | |||
|description=CAGE_peak_3_at_Sp3_5end | |||
|id=chr2:72818459..72818528,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.84e-08!94;UBERON:0004177!1.98e-07!29;UBERON:0007811!3.50e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.93e-07,43;UBERON:0004177,1.93e-07,29;UBERON:0005057,1.93e-07,29 | |||
|phase1_expression=1.92178616525753,2.09385244583617,3.63999391511629,2.41971369045464,6.01074875935617,2.85394762250213,4.67225281191051,17.6898953114959,7.60259099619,5.14941957908386,5.47897498321616,7.17949430958028,15.4080656938085,14.4243663991346,16.3223783289675,18.0202987976945,25.8837894907414,19.0854610041734,14.1227866613911,14.429248161133,7.99406927420056,7.34753038886551,2.35079810225042,5.75972722056264,4.81759490241057,1.14846392823004,2.58457197695445,2.15471232685889,8.17100703662408,5.04060259519861,3.10422714917427,5.71527606113668,6.1506478758457,15.8481681015439,1.1554064790051,1.49611180822643,2.6542016314108,5.02237956884289,3.906676722619,2.09409497589519,4.1176204162171,2.04913645487534,4.85510353031154,3.02152363141385,3.64956952390252,1.65192076945513,1.56478268869608,1.30815093828268,1.09843091367236,1.94429899074283,1.25987779462826,2.87505128729943,4.02678254538567,7.25362142011344,12.0993767691287,2.05807548828758,0.85960031981627,3.6097046459421,13.9598357993122,9.52183762689659,8.87363964908651,1.35537812827653,0.889294796111139,1.3498495759221,1.97773272513395,4.9733608046227,1.49800055259202,1.15265491596466,17.9383029293666,13.6355997715008,17.0363218694619,4.85606673486466,3.75476519617743,16.9037302916637,10.543001812006,12.8690630125403,8.8092704799511,7.91661496128164,5.68344173048101,13.9799464994005,10.9785172322892,16.1483144872596,7.2587579740359,6.75315132038016,5.50073691996516,8.2496003932627,8.96941589034349,13.7935589910722,3.93776205332557,4.38315048619356,4.92769630792852,0.860423876981386,5.439770669662,4.85732872474035,3.24888208723835,4.92829575807069,7.3031098468511,2.89731548382698,1.81850203222008,1.7666978725517,2.39433813620357,3.84979432242953,5.09610479413291,0,4.76280290224671,6.08063677140237,5.05524445014783,5.709193985953,4.91981978929626,4.60170631100957,6.24547176358089,3.65358573974569,3.22861696158482,2.71300752994721,5.17390311397101,2.89033160058254,7.41584903203122,2.74738778147832,6.19227386364912,5.82360659810673,13.2504911076236,11.6370060752453,3.72783522436244,15.2246014446005,10.8912287542997,8.17462576667492,2.27648736561249,0,1.14363204365758,5.54225365797844,8.23501085073528,13.3193613239636,5.38855392596057,7.41574826257959,7.48036960414416,5.51620294430376,4.27725328171328,9.20611582514688,6.31806896084187,8.20723237957248,7.67710613479952,6.20735681970377,10.2635413989049,10.5493372485001,9.72921937863988,10.5053250633577,12.7434345401231,8.2785078636485,14.4430555265004,10.7790465695657,10.9089696981648,8.54863356467542,7.78532297831674,6.268538997399,6.58502836505419,6.56813080501028,1.40442637462647,2.57347907114715,3.6941254921427,6.00664740352955,5.39409937956521,4.32148947506436,4.49814997611899,5.1158700254325,4.78228049950873,4.18561100550734,5.09719462659276,3.15266424391358,1.81015834904829,3.94001913789829,2.83740833410495,3.36259971078264,4.61055242111206,4.69722465661301,4.83666881697493,8.64398743985989,3.63460661282178,3.96675849995316,7.03851226766272,4.18026009348789,6.70110798874885,8.47070803418039,9.78463392917429,6.65789691393957,7.11793592316767,4.94096864172033,4.52403375840485,4.77495532898762,3.50935356814416,10.7858329038507,6.26800344636613,5.97423819763102,3.60369011810855,8.3401414205102,4.50830942692322,7.33144780243131,7.17624202520215,6.8031745293609,6.13394410105296,4.42830443938806,5.65195420228949,4.81248939295022,4.74324203339438,14.0149888801519,12.3832166921318,11.4679677316275,13.5916281330297,10.6117950291063,10.4396599230382,11.2201493605816,5.83686816390127,8.51140380883053,8.62609239164127,2.97712758134803,3.74445207737473,4.79899868099512,3.22915344339442,7.23665282045051,4.98833613449833,8.33762211790133,6.84452901056509,5.60158783058121,7.97946844180907,5.86271901046355,9.28370199455454,6.43941037930736,5.51723004371669,6.86540537911202,5.58091690301205,5.57135270033509,6.73471429276993,6.79850575333104,3.01582567878545,1.63171705145613,5.90117127622843,5.51873492609465,4.17431533968259,6.21221938938677,2.78689407140348,3.02965112645248,5.67914794949262,7.41833614163613,7.53981892064796,6.21318874676635,5.12436950389506,6.79383673893198,10.1202675418724,9.64444331107329,7.90575555893047,8.03303291054518,4.68402281187286,3.02711526234334,5.21238269931443,5.27904393512113,3.98235415019888,4.61283208694465,4.83717691143602,7.35559811048003,1.77181135728464,3.99665692327106,2.32585463851399,4.36240475373007,2.85197902707777,4.42451461110142,3.16255825724996,2.06271086496374,7.48967132658334,7.56256594931503,3.23396709456886,5.35842587578981,6.56158864476412,5.70780216326626,6.08831376227848,2.74018454203139,6.10146440965647,8.47328283455281,5.29268155331909,3.46261131177108,5.48979050766079,7.29786391630686,7.75920236020387,9.02774948597837,5.24665505933731,8.15871328846243,15.8909919142003,6.81076664278634,7.77817014952789,13.9392658183471,14.7629765938707,20.132479242174,0.849892149969277,1.53946597556024,3.04039942369732,0.954670618015114,6.32671987162271,7.9294592179471,5.40026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| |||
|short_description=p3@Sp3 | |||
}} | |||
Revision as of 00:29, 14 September 2013
| Short description: | p3@Sp3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Sp3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000066003, ENSMUST00000102689, NM_001018042, uc008kcc.1_5end |
| EntrezGene: | Sp3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 1.93e-07 | 43 |
| hemopoietic organ | 1.93e-07 | 29 |
| immune organ | 1.93e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
