Personal tools

FFCP PHASE1:Mm9::chr3:108003333..108003363,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=72023|HGNC=|MCL_coexpression_id=359|UniProt=Q3TPE5|association_with_transcript=0bp_to_uc008qyi.1_5end|description=CAGE_peak_2_at_Cyb561d1_5end|id=chr3:108003333..108003363,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.59e-08!59;UBERON:0004923!1.10e-07!24;UBERON:0000344!6.25e-07!15;UBERON:0004119!7.21e-07!130;UBERON:0000925!7.21e-07!130;UBERON:0006595!7.21e-07!130;UBERON:0000160!8.80e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.40e-17,31;UBERON:0005409,2.86e-14,47;UBERON:0001007,2.26e-10,116;UBERON:0001555,2.26e-10,116;UBERON:0007026,2.26e-10,116;UBERON:0004119,6.23e-10,118;UBERON:0000925,6.23e-10,118;UBERON:0006595,6.23e-10,118;UBERON:0000344,8.87e-10,15;UBERON:0004921,3.26e-09,114;UBERON:0001242,6.70e-08,13;UBERON:0001262,6.70e-08,13;UBERON:0004786,6.70e-08,13;UBERON:0004923,2.71e-07,24|phase1_expression=0.80074423552397,2.44282785347553,1.81999695755814,2.41971369045464,2.00358291978539,1.17515490338323,1.16806320297763,0.645616617207881,0,0.234064526321993,0.513653904676515,0.159544317990673,0.684802919724823,0.437102012094987,1.33243904726265,0.404950534779652,0.699561878128147,2.05050407482854,0.548457734422955,1.69755860719212,0.765389611359628,1.78723712161594,2.61199789138935,3.35984087866154,4.5881856213434,4.01962374880514,1.29228598847722,1.72376986148711,5.32065574477847,2.01624103807945,4.43461021310609,1.27006134691926,0,0,1.73310971850765,0.997407872150954,0.204169356262369,6.69650609179052,3.906676722619,8.37637990358077,7.64700934440319,7.5135003345429,5.34061388334269,0.755380907853464,1.31790010585369,0.550640256485045,0.782391344348039,0.872100625521786,0.219686182734472,0.58328969722285,1.1198913730029,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0.889294796111139,4.94944844504769,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,0.518448061542388,0,0.630974884054146,0,0,0.61245399607477,0.191690942036473,0,0,0.510749352340751,0,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0.984440513331393,1.13357340160178,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.79928715803342,1.29468941823586,0.890652834388949,0.173485326766136,1.52232739156071,0.461230994512117,0.60289056221049,0.117588707135705,0.502666365318702,1.48316980640624,1.15679485535929,1.76922110389975,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,0.878342391034642,0.209446706813455,1.53274233125155,0.359445373517761,0,0.762421362438388,0.449371918214468,1.37250180845588,0.251308704225729,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0.203678727700633,1.49288364732112,0.505445516867349,0.841767423545896,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.748401490664606,0.512454881139399,0.749613796477831,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0,0.257347907114715,0.568326998791185,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,0.492502392237286,0.891756905004413,0.292399974850665,1.09775057645525,0.402619256281115,0.420579897128254,0.205809224758569,4.62586296177317,1.85115396664481,0.639864751605702,0.696710015581316,0.515469845288373,1.61346819698674,1.33426826306922,2.28270751335071,2.37264530772256,2.9645811850322,3.2673577144035,3.58121649674071,1.9496408711912,2.69645822596266,2.37751854862164,2.78797782556114,0,0.342745537829186,0,1.4255592949172,0.193952487167626,0.420814919341911,0.316182685621286,0.590440591918409,1.72698600625512,1.1105744752962,0.296452627087149,1.00107063429656,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,1.15078454980324,0.810676133875177,0.823684239564244,0,1.11642284300551,0.624075346229121,0,0.358794827043824,1.4473305640901,2.03228509183265,0.189491411770485,0.488894929326078,0.509235257325564,0.704070744865506,0.670025029767263,0.952174563544055,0.390267295715598,0.945810864637146,1.10732344824387,0.956728611944923,0.81931657357869,1.03610989119537,1.15719246865209,4.52373851817817,1.63171705145613,0,0.551873492609465,0.321101179975584,0.703270119553219,0.163934945376675,0.504941854408746,0.315508219416257,1.56175497718655,1.93881057959519,0.238968797952552,1.11399337041197,3.39691836946599,2.42886421004937,2.33804686329049,0.790575555893047,0.321321316421807,0.851640511249612,0,0.488660878060728,0.824850614862677,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.900305470156551,1.29358683782755,0.643011105094777,0.354680467284547,0.713475270408282,0.822745103010605,0.913394847343798,0.938686832254841,0.847328283455281,0.882113592219848,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,1.31312719796049,2.91480836629851,0.556275906031529,1.87957968877638,0.412773735926445,1.11116716421827,0.753473828018764,0.956859594047176,0.915112692826091,1.01987057996313,0.979660166265606,0.690999869022119,1.90934123603023,0.158167996790568,0.609958401380546,0.756037385752609,0.836353184057875,1.52853794622324,1.07891477107857,0.578574190077352,0.26175594198403,5.96228877142247,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.352071715937262,0.39061315453185,0.629156066554265,0,0.288030006257865,1.58005560314089,0.810900861160657,1.1298205288131,0.77952493786677,1.43221356533985,1.78813219303138,2.04332264183947,1.47689527174577,1.51449674922221,1.295515713135,1.61321896218945,1.26695244961678,2.02044867444692,2.80504565235765,0.680191150845634,0.443971906748129,0.269141569828427,0.839423081820392,1.35232715822533,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0.798049746802062,1.02440163452481,1.21553358534147,0.419226325255965,0.735374033800057,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.512201219238954,0.516919220600519,0.476293691283074,0.115884325944855,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p2@Cyb561d1}}
|EntrezGene=72023
|HGNC=
|MCL_coexpression_id=359
|UniProt=Q3TPE5
|association_with_transcript=0bp_to_uc008qyi.1_5end
|description=CAGE_peak_2_at_Cyb561d1_5end
|id=chr3:108003333..108003363,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!6.59e-08!59;UBERON:0004923!1.10e-07!24;UBERON:0000344!6.25e-07!15;UBERON:0004119!7.21e-07!130;UBERON:0000925!7.21e-07!130;UBERON:0006595!7.21e-07!130;UBERON:0000160!8.80e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.40e-17,31;UBERON:0005409,2.86e-14,47;UBERON:0001007,2.26e-10,116;UBERON:0001555,2.26e-10,116;UBERON:0007026,2.26e-10,116;UBERON:0004119,6.23e-10,118;UBERON:0000925,6.23e-10,118;UBERON:0006595,6.23e-10,118;UBERON:0000344,8.87e-10,15;UBERON:0004921,3.26e-09,114;UBERON:0001242,6.70e-08,13;UBERON:0001262,6.70e-08,13;UBERON:0004786,6.70e-08,13;UBERON:0004923,2.71e-07,24
|phase1_expression=0.80074423552397,2.44282785347553,1.81999695755814,2.41971369045464,2.00358291978539,1.17515490338323,1.16806320297763,0.645616617207881,0,0.234064526321993,0.513653904676515,0.159544317990673,0.684802919724823,0.437102012094987,1.33243904726265,0.404950534779652,0.699561878128147,2.05050407482854,0.548457734422955,1.69755860719212,0.765389611359628,1.78723712161594,2.61199789138935,3.35984087866154,4.5881856213434,4.01962374880514,1.29228598847722,1.72376986148711,5.32065574477847,2.01624103807945,4.43461021310609,1.27006134691926,0,0,1.73310971850765,0.997407872150954,0.204169356262369,6.69650609179052,3.906676722619,8.37637990358077,7.64700934440319,7.5135003345429,5.34061388334269,0.755380907853464,1.31790010585369,0.550640256485045,0.782391344348039,0.872100625521786,0.219686182734472,0.58328969722285,1.1198913730029,0,0.503347818173209,0,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0.889294796111139,4.94944844504769,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,0.518448061542388,0,0.630974884054146,0,0,0.61245399607477,0.191690942036473,0,0,0.510749352340751,0,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0.984440513331393,1.13357340160178,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.421333260395256,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.79928715803342,1.29468941823586,0.890652834388949,0.173485326766136,1.52232739156071,0.461230994512117,0.60289056221049,0.117588707135705,0.502666365318702,1.48316980640624,1.15679485535929,1.76922110389975,0.647067399789637,0.220841518460394,0.484875253135222,1.86391761218122,0.878342391034642,0.209446706813455,1.53274233125155,0.359445373517761,0,0.762421362438388,0.449371918214468,1.37250180845588,0.251308704225729,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0.203678727700633,1.49288364732112,0.505445516867349,0.841767423545896,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.748401490664606,0.512454881139399,0.749613796477831,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.823128545631774,0.59710280045548,0,0.257347907114715,0.568326998791185,0.621377317606506,0.938104239924385,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,0.492502392237286,0.891756905004413,0.292399974850665,1.09775057645525,0.402619256281115,0.420579897128254,0.205809224758569,4.62586296177317,1.85115396664481,0.639864751605702,0.696710015581316,0.515469845288373,1.61346819698674,1.33426826306922,2.28270751335071,2.37264530772256,2.9645811850322,3.2673577144035,3.58121649674071,1.9496408711912,2.69645822596266,2.37751854862164,2.78797782556114,0,0.342745537829186,0,1.4255592949172,0.193952487167626,0.420814919341911,0.316182685621286,0.590440591918409,1.72698600625512,1.1105744752962,0.296452627087149,1.00107063429656,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,1.15078454980324,0.810676133875177,0.823684239564244,0,1.11642284300551,0.624075346229121,0,0.358794827043824,1.4473305640901,2.03228509183265,0.189491411770485,0.488894929326078,0.509235257325564,0.704070744865506,0.670025029767263,0.952174563544055,0.390267295715598,0.945810864637146,1.10732344824387,0.956728611944923,0.81931657357869,1.03610989119537,1.15719246865209,4.52373851817817,1.63171705145613,0,0.551873492609465,0.321101179975584,0.703270119553219,0.163934945376675,0.504941854408746,0.315508219416257,1.56175497718655,1.93881057959519,0.238968797952552,1.11399337041197,3.39691836946599,2.42886421004937,2.33804686329049,0.790575555893047,0.321321316421807,0.851640511249612,0,0.488660878060728,0.824850614862677,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.900305470156551,1.29358683782755,0.643011105094777,0.354680467284547,0.713475270408282,0.822745103010605,0.913394847343798,0.938686832254841,0.847328283455281,0.882113592219848,0.65954501176592,0.484393280087717,0.542816324353403,0.477489376012546,1.31312719796049,2.91480836629851,0.556275906031529,1.87957968877638,0.412773735926445,1.11116716421827,0.753473828018764,0.956859594047176,0.915112692826091,1.01987057996313,0.979660166265606,0.690999869022119,1.90934123603023,0.158167996790568,0.609958401380546,0.756037385752609,0.836353184057875,1.52853794622324,1.07891477107857,0.578574190077352,0.26175594198403,5.96228877142247,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.352071715937262,0.39061315453185,0.629156066554265,0,0.288030006257865,1.58005560314089,0.810900861160657,1.1298205288131,0.77952493786677,1.43221356533985,1.78813219303138,2.04332264183947,1.47689527174577,1.51449674922221,1.295515713135,1.61321896218945,1.26695244961678,2.02044867444692,2.80504565235765,0.680191150845634,0.443971906748129,0.269141569828427,0.839423081820392,1.35232715822533,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0.798049746802062,1.02440163452481,1.21553358534147,0.419226325255965,0.735374033800057,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.561849044819294,0.512201219238954,0.516919220600519,0.476293691283074,0.115884325944855,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0.578719832943424,0.249810577937946,0.233931608445408,0,0.191288332068843,0.661774257358546,0.463735671240843
|short_description=p2@Cyb561d1
}}

Revision as of 01:13, 14 September 2013

Short description:p2@Cyb561d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cyb561d1_5end
Coexpression cluster:MCL_coexpression_mm9:359
Association with transcript: 0bp_to_uc008qyi.1_5end
EntrezGene:Cyb561d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cyb561d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.40e-1731
gastrointestinal system2.86e-1447
digestive system2.26e-10116
digestive tract2.26e-10116
primitive gut2.26e-10116
endoderm-derived structure6.23e-10118
endoderm6.23e-10118
presumptive endoderm6.23e-10118
mucosa8.87e-1015
subdivision of digestive tract3.26e-09114
intestinal mucosa6.70e-0813
wall of intestine6.70e-0813
gastrointestinal system mucosa6.70e-0813
organ component layer2.71e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:108003333..108003363,-&oldid=2993114"