FFCP PHASE1:Mm9::chr3:108115823..108115848,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:108115823..108115848,+|id=chr3:108115823..108115848,+|ontology_enrichment_celltype=CL:0002563!3.58e-11!9;CL:0002251!3.58e-11!9;CL:0002250!2.45e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0002563,8.84e-30,9;CL:0002251,8.84e-30,9;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!3.58e-11!9;UBERON:0004808!3.58e-11!9;UBERON:0001277!3.58e-11!9;UBERON:0000485!6.87e-09!11;UBERON:0001242!2.59e-07!13;UBERON:0000060!2.59e-07!13;UBERON:0001262!2.59e-07!13;UBERON:0004786!2.59e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.84e-30,9;UBERON:0004808,8.84e-30,9;UBERON:0001277,8.84e-30,9;UBERON:0000485,1.34e-24,11;UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24;UBERON:0000160,1.87e-09,31|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,5.48818077527422,0.332469290716985,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr3:108115823..108115848,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:108115823..108115848,+ | |||
|id=chr3:108115823..108115848,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.58e-11!9;CL:0002251!3.58e-11!9;CL:0002250!2.45e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.70e-39,3;CL:0002563,8.84e-30,9;CL:0002251,8.84e-30,9;CL:0002076,2.29e-18,15;CL:0000223,4.59e-14,20;CL:0000066,1.80e-11,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.58e-11!9;UBERON:0004808!3.58e-11!9;UBERON:0001277!3.58e-11!9;UBERON:0000485!6.87e-09!11;UBERON:0001242!2.59e-07!13;UBERON:0000060!2.59e-07!13;UBERON:0001262!2.59e-07!13;UBERON:0004786!2.59e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.84e-30,9;UBERON:0004808,8.84e-30,9;UBERON:0001277,8.84e-30,9;UBERON:0000485,1.34e-24,11;UBERON:0001242,5.26e-21,13;UBERON:0001262,5.26e-21,13;UBERON:0004786,5.26e-21,13;UBERON:0000344,2.29e-18,15;UBERON:0004923,6.63e-12,24;UBERON:0000160,1.87e-09,31 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0,1.17515490338323,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,5.48818077527422,0.332469290716985,7.55426618170766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.655453258862952,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:108115823..108115848,+ | |||
}} |
Revision as of 01:14, 14 September 2013
Short description: | p@chr3:108115823..108115848, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:108115823..108115848, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.70e-39 | 3 |
intestinal epithelial cell | 8.84e-30 | 9 |
epithelial cell of alimentary canal | 8.84e-30 | 9 |
endo-epithelial cell | 2.29e-18 | 15 |
endodermal cell | 4.59e-14 | 20 |
epithelial cell | 1.80e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.84e-30 | 9 |
gastrointestinal system epithelium | 8.84e-30 | 9 |
intestinal epithelium | 8.84e-30 | 9 |
simple columnar epithelium | 1.34e-24 | 11 |
intestinal mucosa | 5.26e-21 | 13 |
wall of intestine | 5.26e-21 | 13 |
gastrointestinal system mucosa | 5.26e-21 | 13 |
mucosa | 2.29e-18 | 15 |
organ component layer | 6.63e-12 | 24 |
intestine | 1.87e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.