Personal tools

FFCP PHASE1:Mm9::chr3:135489192..135489207,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=67547|HGNC=|MCL_coexpression_id=61|UniProt=Q91W10|association_with_transcript=138bp_to_ENSMUST00000029810,uc008rmb.2_5end|description=CAGE_peak_7_at_Slc39a8_5end|id=chr3:135489192..135489207,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!5.08e-14!23;UBERON:0009856!5.08e-14!23;UBERON:0002107!1.94e-13!22;UBERON:0007499!1.94e-13!22;UBERON:0006925!1.94e-13!22;UBERON:0009497!1.94e-13!22;UBERON:0000015!1.94e-13!22;UBERON:0002423!1.94e-13!22;UBERON:0006235!1.94e-13!22;UBERON:0008835!1.94e-13!22;UBERON:0003894!1.94e-13!22;UBERON:0004161!1.94e-13!22;UBERON:0008836!1.94e-13!22;UBERON:0002365!8.21e-13!25;UBERON:0002330!8.21e-13!25;UBERON:0009569!6.83e-09!66;UBERON:0005172!1.60e-08!49;UBERON:0005173!1.60e-08!49;UBERON:0002417!1.60e-08!49;UBERON:0000916!1.60e-08!49;UBERON:0004921!6.37e-07!126;UBERON:0004185!6.37e-07!126;UBERON:0005177!6.39e-07!85;UBERON:0004119!7.20e-07!130;UBERON:0000925!7.20e-07!130;UBERON:0006595!7.20e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.91e-20,23;UBERON:0009856,1.91e-20,23;UBERON:0002107,2.78e-19,22;UBERON:0007499,2.78e-19,22;UBERON:0006925,2.78e-19,22;UBERON:0009497,2.78e-19,22;UBERON:0000015,2.78e-19,22;UBERON:0002423,2.78e-19,22;UBERON:0006235,2.78e-19,22;UBERON:0008835,2.78e-19,22;UBERON:0003894,2.78e-19,22;UBERON:0004161,2.78e-19,22;UBERON:0008836,2.78e-19,22;UBERON:0002365,1.40e-18,25;UBERON:0002330,1.40e-18,25;UBERON:0005172,2.02e-12,49;UBERON:0005173,2.02e-12,49;UBERON:0002417,2.02e-12,49;UBERON:0000916,2.02e-12,49;UBERON:0003914,3.87e-08,47;UBERON:0005256,1.45e-07,45;UBERON:0009569,1.78e-07,66|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.33243904726265,3.64455481301687,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,1.27006134691926,1.84519436275371,0,0,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0.768436610643109,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0,0,0,0,4.05810284182349,8.60423876981386,0.679971333707751,6.47643829965381,3.89865850468601,0.896053774194671,1.26399978118577,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,1.7127581957859,0,0,0,0,0,0.150722640552623,0.23517741427141,0,4.94389935468748,0,1.76922110389975,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0.497627882440372,0.505445516867349,1.89397670297827,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.646703978798527,0.567318240503458,0,0,0,0,0.205782136407943,0,0,0,0,1.65700618028402,2.34526059981096,0.180062061461015,0,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.720332286654991,0,0.264450566663544,0.213288250535234,0,0.515469845288373,3.83198696784351,11.1189021922435,18.8323369851434,1.42358718463353,13.9994111515409,15.834118154417,17.5081695396213,16.3769833180061,0,0,0,0,0,0,0,0,0.49095073923223,0.758838445491087,1.47610147979602,1.255989822731,0.987177311374404,2.96452627087149,5.33904338291501,4.71741588271687,3.37293168577281,4.26006254915856,3.85883455603867,1.2731292589071,0.575392274901621,0.648540907100142,1.64736847912849,1.43768206527355,2.60498663367952,4.05648975048929,4.04126204715379,3.04975602987251,6.75420929908714,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0.335012514883631,0.714130922658041,0.195133647857799,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,7.37646409528554,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0,0.922305443831782,2.84271122485043,0.727067458955011,0.356497378384721,0,1.05418608574999,0,0,0,0.388076051348264,0.428674070063185,0.354680467284547,0,0.164549020602121,0,0.469343416127421,1.69465656691056,1.10264199027481,0,0,0.0603129249281559,0.596861720015682,1.47726809770555,0.874442509889552,0.18542530201051,1.87957968877638,0.206386867963223,1.11116716421827,1.13021074202815,1.6403307326523,1.37266903923914,0.169978429993855,0.139951452323658,0,0,0.790839983952838,0,0.86404272657441,0,0.655087691238533,0.134864346384821,0.41326727862668,0,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.360586348559907,0,0,0.15241361331,0,0,0,0.233753804363138,0,0,0,0,0,0.93841237725591,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,1.99512436700516,0.341467211508268,0.729320151204882,0.628839487883947,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,1.2673964994512,1.13175804831646,0.37456602987953,1.21647789569252,1.32101578597911,0,0.347652977834566,0.964546102318525,1.23625770240992,1.17759136107518,1.02860775715625,1.24233064311536,0.715308569841963,0.872078499793971,0.658765662907314,0.423073039458382,1.46342378298218,1.05227884575137,0.543216455383447,1.68342681497322,1.18635018124174,1.37906275325789,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,0.935726433781634,1.28922632428979,0,0.220591419119515,0|short_description=p7@Slc39a8}}
|EntrezGene=67547
|HGNC=
|MCL_coexpression_id=61
|UniProt=Q91W10
|association_with_transcript=138bp_to_ENSMUST00000029810,uc008rmb.2_5end
|description=CAGE_peak_7_at_Slc39a8_5end
|id=chr3:135489192..135489207,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!5.08e-14!23;UBERON:0009856!5.08e-14!23;UBERON:0002107!1.94e-13!22;UBERON:0007499!1.94e-13!22;UBERON:0006925!1.94e-13!22;UBERON:0009497!1.94e-13!22;UBERON:0000015!1.94e-13!22;UBERON:0002423!1.94e-13!22;UBERON:0006235!1.94e-13!22;UBERON:0008835!1.94e-13!22;UBERON:0003894!1.94e-13!22;UBERON:0004161!1.94e-13!22;UBERON:0008836!1.94e-13!22;UBERON:0002365!8.21e-13!25;UBERON:0002330!8.21e-13!25;UBERON:0009569!6.83e-09!66;UBERON:0005172!1.60e-08!49;UBERON:0005173!1.60e-08!49;UBERON:0002417!1.60e-08!49;UBERON:0000916!1.60e-08!49;UBERON:0004921!6.37e-07!126;UBERON:0004185!6.37e-07!126;UBERON:0005177!6.39e-07!85;UBERON:0004119!7.20e-07!130;UBERON:0000925!7.20e-07!130;UBERON:0006595!7.20e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.91e-20,23;UBERON:0009856,1.91e-20,23;UBERON:0002107,2.78e-19,22;UBERON:0007499,2.78e-19,22;UBERON:0006925,2.78e-19,22;UBERON:0009497,2.78e-19,22;UBERON:0000015,2.78e-19,22;UBERON:0002423,2.78e-19,22;UBERON:0006235,2.78e-19,22;UBERON:0008835,2.78e-19,22;UBERON:0003894,2.78e-19,22;UBERON:0004161,2.78e-19,22;UBERON:0008836,2.78e-19,22;UBERON:0002365,1.40e-18,25;UBERON:0002330,1.40e-18,25;UBERON:0005172,2.02e-12,49;UBERON:0005173,2.02e-12,49;UBERON:0002417,2.02e-12,49;UBERON:0000916,2.02e-12,49;UBERON:0003914,3.87e-08,47;UBERON:0005256,1.45e-07,45;UBERON:0009569,1.78e-07,66
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.33243904726265,3.64455481301687,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,1.27006134691926,1.84519436275371,0,0,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0.768436610643109,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0.589257170947335,0,0,0,0,4.05810284182349,8.60423876981386,0.679971333707751,6.47643829965381,3.89865850468601,0.896053774194671,1.26399978118577,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,1.7127581957859,0,0,0,0,0,0.150722640552623,0.23517741427141,0,4.94389935468748,0,1.76922110389975,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0,0.510914110417183,0.11981512450592,0,0,0.299581278809645,0,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0.497627882440372,0.505445516867349,1.89397670297827,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.0937017245597288,0,0.646703978798527,0.567318240503458,0,0,0,0,0.205782136407943,0,0,0,0,1.65700618028402,2.34526059981096,0.180062061461015,0,0.393528463494808,0,0,0,0.350296027101508,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.720332286654991,0,0.264450566663544,0.213288250535234,0,0.515469845288373,3.83198696784351,11.1189021922435,18.8323369851434,1.42358718463353,13.9994111515409,15.834118154417,17.5081695396213,16.3769833180061,0,0,0,0,0,0,0,0,0.49095073923223,0.758838445491087,1.47610147979602,1.255989822731,0.987177311374404,2.96452627087149,5.33904338291501,4.71741588271687,3.37293168577281,4.26006254915856,3.85883455603867,1.2731292589071,0.575392274901621,0.648540907100142,1.64736847912849,1.43768206527355,2.60498663367952,4.05648975048929,4.04126204715379,3.04975602987251,6.75420929908714,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0.335012514883631,0.714130922658041,0.195133647857799,0.630540576424764,0.44292937929755,0.637819074629948,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,7.37646409528554,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0,0.922305443831782,2.84271122485043,0.727067458955011,0.356497378384721,0,1.05418608574999,0,0,0,0.388076051348264,0.428674070063185,0.354680467284547,0,0.164549020602121,0,0.469343416127421,1.69465656691056,1.10264199027481,0,0,0.0603129249281559,0.596861720015682,1.47726809770555,0.874442509889552,0.18542530201051,1.87957968877638,0.206386867963223,1.11116716421827,1.13021074202815,1.6403307326523,1.37266903923914,0.169978429993855,0.139951452323658,0,0,0.790839983952838,0,0.86404272657441,0,0.655087691238533,0.134864346384821,0.41326727862668,0,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.360586348559907,0,0,0.15241361331,0,0,0,0.233753804363138,0,0,0,0,0,0.93841237725591,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,1.99512436700516,0.341467211508268,0.729320151204882,0.628839487883947,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,1.2673964994512,1.13175804831646,0.37456602987953,1.21647789569252,1.32101578597911,0,0.347652977834566,0.964546102318525,1.23625770240992,1.17759136107518,1.02860775715625,1.24233064311536,0.715308569841963,0.872078499793971,0.658765662907314,0.423073039458382,1.46342378298218,1.05227884575137,0.543216455383447,1.68342681497322,1.18635018124174,1.37906275325789,0.409231043169689,0.464810523557898,0.771626443924566,0.249810577937946,0.935726433781634,1.28922632428979,0,0.220591419119515,0
|short_description=p7@Slc39a8
}}

Revision as of 01:37, 14 September 2013

Short description:p7@Slc39a8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Slc39a8_5end
Coexpression cluster:MCL_coexpression_mm9:61
Association with transcript: 138bp_to_ENSMUST00000029810, uc008rmb.2_5end
EntrezGene:Slc39a8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Slc39a8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F718.83
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E914.00
intestine, neonate N06.CNhs11102.688-20B815.83
intestine, neonate N07.CNhs11095.720-20F217.51
intestine, neonate N10.CNhs11098.755-23A516.38
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum1.91e-2023
sac1.91e-2023
liver2.78e-1922
epithelial sac2.78e-1922
digestive gland2.78e-1922
epithelium of foregut-midgut junction2.78e-1922
anatomical boundary2.78e-1922
hepatobiliary system2.78e-1922
foregut-midgut junction2.78e-1922
hepatic diverticulum2.78e-1922
liver primordium2.78e-1922
septum transversum2.78e-1922
liver bud2.78e-1922
exocrine gland1.40e-1825
exocrine system1.40e-1825
abdomen element2.02e-1249
abdominal segment element2.02e-1249
abdominal segment of trunk2.02e-1249
abdomen2.02e-1249
epithelial tube3.87e-0847
trunk mesenchyme1.45e-0745
subdivision of trunk1.78e-0766







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:135489192..135489207,%2B&oldid=2994966"