FFCP PHASE1:Mm9::chr3:79689105..79689119,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68659|HGNC=|UniProt=|association_with_transcript=252bp_to_ENSMUST00000135021_5end|description=CAGE_peak_7_at_Fam198b_5end|id=chr3:79689105..79689119,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.05e-07,6;CL:0000187,3.05e-07,6;CL:0000056,3.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!2.47e-08!23;UBERON:0001009!2.47e-08!23;UBERON:0007100!3.83e-07!18;UBERON:0000948!3.83e-07!18;UBERON:0005498!3.83e-07!18;UBERON:0004140!3.83e-07!18;UBERON:0009881!3.83e-07!18;UBERON:0004141!3.83e-07!18;UBERON:0003084!3.83e-07!18;UBERON:0007005!3.83e-07!18;UBERON:0004139!3.83e-07!18;UBERON:0004291!3.83e-07!18;UBERON:0005157!4.07e-07!27;UBERON:0005178!4.15e-07!17;UBERON:0005181!4.15e-07!17;UBERON:0002224!4.15e-07!17;UBERON:0000915!4.15e-07!17;UBERON:0008947!4.15e-07!17;UBERON:0003258!4.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.68e-08,23;UBERON:0001009,1.68e-08,23;UBERON:0004872,4.15e-07,33|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,7.70464677268311,4.03802854755699,0.782391344348039,1.96222640742402,1.09843091367236,1.94429899074283,3.21968769738334,0,0,0,0,6.43148590089868,4.87106847895886,2.06268836910977,0,0,0,3.04960078862219,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,1.1183966749518,1.13589289999776,0.831287161174641,0,0,0,0,0,0,0,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,1.5154372870785,3.80039798212648,3.0331466700887,0,0,0.29688427812965,2.60227990149204,2.74018930480927,2.99800146432876,2.56228488939458,1.76383060703557,0.376999773989026,0.247194967734374,1.01219549843938,0,1.29413479957927,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,4.07357455401265,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.753524089178575,0.680364991513279,0.768682321709099,0.562210347358373,0,0.646703978798527,1.13463648100692,0.527853372491847,1.31517439456545,0.834141747676794,2.43776516565517,1.64625709126355,3.18454826909589,0,0,0,2.07125772535502,0.938104239924385,2.52086886045421,2.60419209143731,2.16440654922144,3.23960937063494,3.0229412817553,2.14618721119695,1.75148013550754,1.97471819896177,0.820837320395476,0.810688095458557,0.438599962275997,1.09775057645525,0.402619256281115,0,0,0,0.264450566663544,4.69234151177515,1.39342003116263,1.54640953586512,1.21010114774006,1.11189021922435,0.951128130562796,0,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.70701110857774,0.913988100877831,2.25415471346161,0.610953983535943,1.35766741017338,0.631222379012867,0.189709611372772,0,0,0.246794327843601,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.47802552133284,0.947457058852424,1.14075483509418,0.848725428875941,0.938760993154008,3.1826188913945,5.71304738126433,2.92700471786698,2.52216230569906,1.7717175171902,2.71073106717728,0.327726629431476,1.38147985492716,1.88043776155965,0,0,0.983528546038072,0,0,0.117211686592203,3.93443868904021,0.504941854408746,1.26203287766503,1.95219372148319,1.29254038639679,0.477937595905104,1.11399337041197,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0,0.851640511249612,1.78065603667255,2.28041743095006,0.659880491890142,0,0.728341908464944,0.906970670894253,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,0.727067458955011,1.06949213515416,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.16488625294148,1.29171541356724,1.08563264870681,0.954978752025092,0.492422699235184,0,0,0,4.54051109519089,2.40752885580625,0,0,0,0,0,0,0.954670618015114,3.32152793260192,2.03319467126849,1.29606408986162,1.88179466413022,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.259229946583586,0,0,4.63501292736334,3.47462829959905,3.11121901350476,3.61647505737647,4.89972763923257,3.28600268208111,1.69265700297135,1.25831213310853,0,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,1.12609485270709,0.183151624267265,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0.415149390336707,1.19707462020309,1.19513524027894,1.94485373654635,1.04806581313991,0.551530525350042,0.888986911206461,1.03017528619447,2.24643446714271,0.505394423527595,1.52087579934144,1.13175804831646,0.468207537349412,0.8963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| ||
|EntrezGene=68659 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=252bp_to_ENSMUST00000135021_5end | |||
|description=CAGE_peak_7_at_Fam198b_5end | |||
|id=chr3:79689105..79689119,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.05e-07,6;CL:0000187,3.05e-07,6;CL:0000056,3.05e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.47e-08!23;UBERON:0001009!2.47e-08!23;UBERON:0007100!3.83e-07!18;UBERON:0000948!3.83e-07!18;UBERON:0005498!3.83e-07!18;UBERON:0004140!3.83e-07!18;UBERON:0009881!3.83e-07!18;UBERON:0004141!3.83e-07!18;UBERON:0003084!3.83e-07!18;UBERON:0007005!3.83e-07!18;UBERON:0004139!3.83e-07!18;UBERON:0004291!3.83e-07!18;UBERON:0005157!4.07e-07!27;UBERON:0005178!4.15e-07!17;UBERON:0005181!4.15e-07!17;UBERON:0002224!4.15e-07!17;UBERON:0000915!4.15e-07!17;UBERON:0008947!4.15e-07!17;UBERON:0003258!4.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.68e-08,23;UBERON:0001009,1.68e-08,23;UBERON:0004872,4.15e-07,33 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,7.70464677268311,4.03802854755699,0.782391344348039,1.96222640742402,1.09843091367236,1.94429899074283,3.21968769738334,0,0,0,0,6.43148590089868,4.87106847895886,2.06268836910977,0,0,0,3.04960078862219,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,1.1183966749518,1.13589289999776,0.831287161174641,0,0,0,0,0,0,0,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,1.5154372870785,3.80039798212648,3.0331466700887,0,0,0.29688427812965,2.60227990149204,2.74018930480927,2.99800146432876,2.56228488939458,1.76383060703557,0.376999773989026,0.247194967734374,1.01219549843938,0,1.29413479957927,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,4.07357455401265,0.373220911830279,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0.540186389416048,0.753524089178575,0.680364991513279,0.768682321709099,0.562210347358373,0,0.646703978798527,1.13463648100692,0.527853372491847,1.31517439456545,0.834141747676794,2.43776516565517,1.64625709126355,3.18454826909589,0,0,0,2.07125772535502,0.938104239924385,2.52086886045421,2.60419209143731,2.16440654922144,3.23960937063494,3.0229412817553,2.14618721119695,1.75148013550754,1.97471819896177,0.820837320395476,0.810688095458557,0.438599962275997,1.09775057645525,0.402619256281115,0,0,0,0.264450566663544,4.69234151177515,1.39342003116263,1.54640953586512,1.21010114774006,1.11189021922435,0.951128130562796,0,0.494096864172033,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.70701110857774,0.913988100877831,2.25415471346161,0.610953983535943,1.35766741017338,0.631222379012867,0.189709611372772,0,0,0.246794327843601,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,1.47802552133284,0.947457058852424,1.14075483509418,0.848725428875941,0.938760993154008,3.1826188913945,5.71304738126433,2.92700471786698,2.52216230569906,1.7717175171902,2.71073106717728,0.327726629431476,1.38147985492716,1.88043776155965,0,0,0.983528546038072,0,0,0.117211686592203,3.93443868904021,0.504941854408746,1.26203287766503,1.95219372148319,1.29254038639679,0.477937595905104,1.11399337041197,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,0,0.851640511249612,1.78065603667255,2.28041743095006,0.659880491890142,0,0.728341908464944,0.906970670894253,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,0.727067458955011,1.06949213515416,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.16488625294148,1.29171541356724,1.08563264870681,0.954978752025092,0.492422699235184,0,0,0,4.54051109519089,2.40752885580625,0,0,0,0,0,0,0.954670618015114,3.32152793260192,2.03319467126849,1.29606408986162,1.88179466413022,0.87345025498471,0.674321731924103,0.661227645802687,0.523511883968059,0.259229946583586,0,0,4.63501292736334,3.47462829959905,3.11121901350476,3.61647505737647,4.89972763923257,3.28600268208111,1.69265700297135,1.25831213310853,0,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0.19318959403219,1.12609485270709,0.183151624267265,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0.415149390336707,1.19707462020309,1.19513524027894,1.94485373654635,1.04806581313991,0.551530525350042,0.888986911206461,1.03017528619447,2.24643446714271,0.505394423527595,1.52087579934144,1.13175804831646,0.468207537349412,0.89635213366817,1.32101578597911,1.42888107384922,1.0429589335037,0.38581844092741,1.23625770240992,2.50238164228475,1.37147700954166,0.887379030796687,1.1921809497366,1.0174249164263,1.59985946706062,0.930760686808441,0.914639864363863,1.8414879800649,1.22223702461276,2.24456908663095,1.30498519936592,1.18205378850676,1.63692417267876,0.77468420592983,1.15743966588685,1.24905288968973,1.16965804222704,2.36358159453128,1.72159498861959,1.32354851471709,1.39120701372253 | |||
|short_description=p7@Fam198b | |||
}} |
Revision as of 02:34, 14 September 2013
Short description: | p7@Fam198b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fam198b_5end |
Coexpression cluster: | NA |
Association with transcript: | 252bp_to_ENSMUST00000135021_5end |
EntrezGene: | Fam198b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.05e-07 | 6 |
muscle cell | 3.05e-07 | 6 |
myoblast | 3.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.68e-08 | 23 |
circulatory system | 1.68e-08 | 23 |
splanchnic layer of lateral plate mesoderm | 4.15e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.