FFCP PHASE1:Hg19::chr7:99517076..99517087,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89122|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16275|TSSclassifier=S|UniProt=|association_with_transcript=28bp_to_ENST00000354241_5end|description=CAGE_peak_5_at_TRIM4_5end|id=chr7:99517076..99517087,-|ontology_enrichment_celltype=CL:0000860!2.26e-07!45|ontology_enrichment_celltype_v019=CL:0000860;6.13e-08;33!CL:0002057;6.13e-08;33|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-07,42;CL:0002057,2.19e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.36181893051724,2.35510576280081,1.40954404095971,2.00146596706261,0.893922188854576,2.61701557230111,0,0.631719873426831,2.08948502559871,0.737201809504527,1.39560233594486,0.655324116390517,0.791300934685361,0,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,0.612002073732759,0.313454721478088,0.85870796139317,0.684372125364421,0.376627918784408,0.916960868975415,0.492603536699674,0.708397031823113,0.786728553697808,0.767658796194425,0.77408061658038,0,2.409647350226,1.84877005083394,0.46480320348181,0.568676929949686,0.880801318004542,0.553995408531877,0.200544447470142,0.651032612147555,2.23915474239924,1.94336199611388,2.06060454107349,3.19876125315042,1.13362783106643,3.15359279544161,2.55671940596253,2.05583944010913,1.85823822537062,1.43846196161075,2.30544635876191,1.89185783910868,0.689491361473237,1.93645405075148,1.35426486594342,1.88242339542605,2.72906150057846,2.47195832889593,1.22433556948361,2.88836124368484,1.27867425159808,2.63881040149373,1.99463657621632,4.26224750532694,0.870627715885752,1.70215567407342,0,0.75374599577023,1.0429658368404,1.3031330682307,1.21079900526674,1.47311054395026,0.316462387440884,1.69004229049553,1.06302149982522,0.628975936525128,1.68492946719743,1.20141514273205,1.12507910687956,2.28010194992999,0.79566670879636,1.0959849225878,0,0,2.66852776159066,0.426730222566507,1.60158394814405,1.14950487990897,1.32208974556972,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,1.58030450865046,0.196709770113833,0.786021525498329,0.411202997999018,0.668745981562712,1.30368906653436,1.4203434172042,3.89653456815823,0.891283655081389,0.883817722424512,0.221533894583621,0.270803863765016,0.512365278902701,0.650296737799391,0.822189523018381,0.552700035571697,0.579606171470105,0.593146252648242,1.07016331235885,1.04535523804977,0.679856056185397,0,0,1.01207876807801,0.637130828648193,0.651083453856419,1.90090408889675,1.05402583354441,1.15187950038977,1.24930726552346,1.4206635122641,1.64225599384209,0.80642697289893,0.267440195783507,0.579297615531196,0,0.670700859703636,1.02290049474824,0.722878304769133,1.50401373190767,1.01392563272577,0,2.43317435151318,0.661743720148475,0.221729397462564,0.43917392846563,1.63723844372141,1.82147644146271,0.741568885568859,1.29818957461873,0.696518949197069,1.06366368415092,1.43094374583205,0,0.371457501329565,1.39133685156694,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,0.275118041940067,1.8809546988313,0.775250277507987,0.71153252537342,0.33472061276467,1.61131726843659,1.52054421143703,1.46437234528902,1.10298924103761,0,0.892997282840798,0.44905874525234,0.788280363383256,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,1.98788780678127,0.886413581652058,2.38336525463794,2.58152958673932,0.709336764396714,0,0,0.49333509683432,2.17847724779836,1.0776853765575,0.980771418680752,1.05950199351452,0,0.468642863667593,1.24864030732128,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0.702254033511242,1.22492502752936,0.245668634623536,0.309977343527296,0,1.7308685049499,0,0,0.336672227908132,0.375355559615893,0.831192346452549,1.75591048352335,1.5324389789951,1.50238058906597,0.680593098960126,1.4351170855109,0.85422955527427,0.635795703478686,1.80054657650641,1.23663035086127,3.34932702059318,1.11670113798954,1.0126579934476,0.876933046450788,3.28163906517349,1.93304787148829,1.2931684545505,2.13005755509969,1.5112814734146,0.508681776931463,0.966304265816484,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,1.92972281457866,0,0,3.60939740834793,0.946454400318751,1.51726221070292,0.241011029883482,0.772057809126758,1.08939722046203,1.18635309555548,0.404493924480493,0,1.53898862778556,0.738155454624648,0,1.6462960453256,0,1.26755034821831,2.94848165003288,0.590789906681404,0,0.860919069801795,0.171567810298526,1.20725313949488,3.37205259772859,0.201057944823262,0.185176890317059,0.325808305310325,2.07986957055916,1.44331342025273,0.695582429850461,1.05667824812239,0.577465791044295,0,0.570762456703795,0,0,0.984868024349589,0,0.891786973732369,0.93733833986777,1.17587489739202,1.13420077793909,2.23896306757121,1.45316969256981,1.15014803749563,3.94130590316755,1.5848718122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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16275 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000354241_5end | |||
|description=CAGE_peak_5_at_TRIM4_5end | |||
|id=chr7:99517076..99517087,- | |||
|ontology_enrichment_celltype=CL:0000860!2.26e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.13e-08;33!CL:0002057;6.13e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-07,42;CL:0002057,2.19e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@TRIM4 | |||
}} |
Revision as of 02:44, 14 September 2013
Short description: | p5@TRIM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TRIM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000354241_5end |
EntrezGene: | TRIM4 |
HGNC: | 16275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.19e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.