FFCP PHASE1:Mm9::chr4:107791133..107791158,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20280|HGNC=|UniProt=P32020|association_with_transcript=0bp_to_ENSMUST00000030340,NM_011327_5end|description=CAGE_peak_4_at_Scp2_5end|id=chr4:107791133..107791158,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.45e-07!122;UBERON:0000025!9.00e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.59e-07,122;UBERON:0000025,9.23e-07,114|phase1_expression=2.7225304007815,7.67745896806594,5.0049916332849,2.41971369045464,2.50447864973174,4.02910252588535,4.43864017131499,3.74457637980571,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,2.9104124088305,5.50748535239684,0.666219523631325,1.01237633694913,1.39912375625629,2.5236973228659,2.05671650408608,4.2438965179803,3.14660173558958,5.65958421845046,3.13439746966722,3.99981056983517,4.35877634027623,4.59385571292016,5.59990595006797,7.75696437669201,3.80046838912748,6.80481350351813,5.76499327703792,0.635030673459631,1.23012957516914,0,4.04392267651784,5.65197794218874,3.47087905646027,24.6933662134776,15.626706890476,13.6116173433188,10.5881667845583,16.3930916390027,14.0798002379035,1.51076181570693,2.33166941804883,3.30384153891027,0.782391344348039,2.39827672018491,1.97717564461025,2.72201858703997,4.61955191363696,1.43752564364972,1.51004345451963,0,0.336093799142464,1.02903774414379,4.58453503902011,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,2.71075625655306,2.66788438833342,0.899899717281399,0,2.8419204597844,0.599200221036809,1.15265491596466,5.39185984004084,4.86021377994086,4.41682418837902,3.14216082844184,3.3130281142742,4.65465037016825,4.60058260887535,1.83843757322004,4.40463523997555,6.12899222808901,4.45458946443106,3.56092976871523,3.38504281328916,6.25096044668112,3.62937898701795,3.37657566019008,4.73674568108111,2.94628585473668,4.27115042397309,3.35519002485541,0.757261933331841,2.79614772395106,2.6087803983151,8.60423876981386,3.39985666853875,3.77792234146472,4.54843492213368,6.72040330646003,4.49422144421606,1.02258193546835,1.29893002301434,2.82671659608272,4.3661460130771,2.56652954828636,2.54805239706646,0,1.5154372870785,1.26679932737549,1.01104889002957,3.76806803072898,4.91981978929626,3.71105347662062,3.46970653532272,1.52232739156071,3.22861696158482,4.52167921657868,3.64524992120685,6.28332956648377,4.44950941921873,10.9895511259133,5.30766331169925,3.07357014900077,3.5334642953663,3.39412677194655,1.86391761218122,3.80615036115011,2.93225389538837,8.68553987709211,5.51149572727233,11.3981518888747,5.71816021828791,5.09288173976397,3.20250421973039,4.52355667606312,2.9550134432687,6.90431734791892,4.1557608911912,6.32740925964255,3.05518091550949,6.09594155989456,9.85618757891331,6.52369753248069,2.86264974517948,2.06911893990126,2.88099407688559,3.76762044589288,2.31324097114515,1.66547836370305,2.99845518591132,5.43277078551933,2.80238390812695,2.83659120251729,2.11141348996739,2.6303487891309,0.556094498451196,1.74126083261083,1.64625709126355,2.58744546864041,9.83098462238529,10.808612098818,6.81992398549422,3.52113813310353,3.75241695969754,3.96136535214233,3.78791576936336,5.1158700254325,4.9365476123961,6.0458825635106,9.65784245038629,9.80828875884224,11.6837493438571,10.8350526292203,14.6734545277999,16.3743985916372,16.0271584162467,20.936201326618,6.09840850835969,6.38008596751563,5.61711931072457,5.02456076660734,1.91959425481711,3.94802342162745,2.44848176511977,2.21851877085677,4.22518283305254,4.1849637744763,7.11793592316767,8.39964669092456,5.7807098024062,7.75930240960488,5.06906626509712,1.79763881730844,6.48414149624083,7.16908583715722,1.70701110857774,1.82797620175566,3.38123207019241,2.8511185898344,2.32742984601151,3.15611189506434,2.78240763346732,2.50937251565324,3.29697328466887,3.33172342588861,6.81841042300442,1.50160595144485,2.55526693647164,3.59779379815766,3.85434230638156,1.68824011826692,5.60176873919124,4.60313819921297,2.7562988551756,6.86403532970204,12.9391385874619,10.0478055870496,10.2972432127805,8.5876818502018,10.9432422248366,3.85954817090694,2.95605104266567,4.73728529426212,2.28150967018836,3.39490171550376,2.11221223459652,3.01511263395268,3.09456733151818,4.29294025287157,2.52216230569906,3.76489972402917,4.30527875375215,3.93271955317771,4.48980952851328,4.05017364028232,1.50791283939272,2.71952841909355,3.44234991113325,6.89841865761831,4.65596710964597,7.501547941901,2.78689407140348,7.32165688892682,1.26203287766503,0.390438744296638,1.93881057959519,1.43381278771531,1.33679204449436,1.41538265394416,2.02405350837447,3.21481443702443,1.18586333383957,5.78378369559253,3.69044221541498,2.49291845134157,1.95464351224291,3.13443233647817,0,1.94224508923985,3.02323556964751,5.09233715340925,3.54362271456927,4.61152721915891,4.13485269069154,2.18120237686503,3.56497378384721,5.68866164284469,2.10837217149998,6.18813259489121,3.74483566329167,2.16073312837572,2.45781499187234,2.7863814554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| ||
|EntrezGene=20280 | |||
|HGNC= | |||
|UniProt=P32020 | |||
|association_with_transcript=0bp_to_ENSMUST00000030340,NM_011327_5end | |||
|description=CAGE_peak_4_at_Scp2_5end | |||
|id=chr4:107791133..107791158,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!5.45e-07!122;UBERON:0000025!9.00e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.59e-07,122;UBERON:0000025,9.23e-07,114 | |||
|phase1_expression=2.7225304007815,7.67745896806594,5.0049916332849,2.41971369045464,2.50447864973174,4.02910252588535,4.43864017131499,3.74457637980571,0.140788722151667,0.468129052643987,0.171217968225505,0.159544317990673,2.9104124088305,5.50748535239684,0.666219523631325,1.01237633694913,1.39912375625629,2.5236973228659,2.05671650408608,4.2438965179803,3.14660173558958,5.65958421845046,3.13439746966722,3.99981056983517,4.35877634027623,4.59385571292016,5.59990595006797,7.75696437669201,3.80046838912748,6.80481350351813,5.76499327703792,0.635030673459631,1.23012957516914,0,4.04392267651784,5.65197794218874,3.47087905646027,24.6933662134776,15.626706890476,13.6116173433188,10.5881667845583,16.3930916390027,14.0798002379035,1.51076181570693,2.33166941804883,3.30384153891027,0.782391344348039,2.39827672018491,1.97717564461025,2.72201858703997,4.61955191363696,1.43752564364972,1.51004345451963,0,0.336093799142464,1.02903774414379,4.58453503902011,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,2.71075625655306,2.66788438833342,0.899899717281399,0,2.8419204597844,0.599200221036809,1.15265491596466,5.39185984004084,4.86021377994086,4.41682418837902,3.14216082844184,3.3130281142742,4.65465037016825,4.60058260887535,1.83843757322004,4.40463523997555,6.12899222808901,4.45458946443106,3.56092976871523,3.38504281328916,6.25096044668112,3.62937898701795,3.37657566019008,4.73674568108111,2.94628585473668,4.27115042397309,3.35519002485541,0.757261933331841,2.79614772395106,2.6087803983151,8.60423876981386,3.39985666853875,3.77792234146472,4.54843492213368,6.72040330646003,4.49422144421606,1.02258193546835,1.29893002301434,2.82671659608272,4.3661460130771,2.56652954828636,2.54805239706646,0,1.5154372870785,1.26679932737549,1.01104889002957,3.76806803072898,4.91981978929626,3.71105347662062,3.46970653532272,1.52232739156071,3.22861696158482,4.52167921657868,3.64524992120685,6.28332956648377,4.44950941921873,10.9895511259133,5.30766331169925,3.07357014900077,3.5334642953663,3.39412677194655,1.86391761218122,3.80615036115011,2.93225389538837,8.68553987709211,5.51149572727233,11.3981518888747,5.71816021828791,5.09288173976397,3.20250421973039,4.52355667606312,2.9550134432687,6.90431734791892,4.1557608911912,6.32740925964255,3.05518091550949,6.09594155989456,9.85618757891331,6.52369753248069,2.86264974517948,2.06911893990126,2.88099407688559,3.76762044589288,2.31324097114515,1.66547836370305,2.99845518591132,5.43277078551933,2.80238390812695,2.83659120251729,2.11141348996739,2.6303487891309,0.556094498451196,1.74126083261083,1.64625709126355,2.58744546864041,9.83098462238529,10.808612098818,6.81992398549422,3.52113813310353,3.75241695969754,3.96136535214233,3.78791576936336,5.1158700254325,4.9365476123961,6.0458825635106,9.65784245038629,9.80828875884224,11.6837493438571,10.8350526292203,14.6734545277999,16.3743985916372,16.0271584162467,20.936201326618,6.09840850835969,6.38008596751563,5.61711931072457,5.02456076660734,1.91959425481711,3.94802342162745,2.44848176511977,2.21851877085677,4.22518283305254,4.1849637744763,7.11793592316767,8.39964669092456,5.7807098024062,7.75930240960488,5.06906626509712,1.79763881730844,6.48414149624083,7.16908583715722,1.70701110857774,1.82797620175566,3.38123207019241,2.8511185898344,2.32742984601151,3.15611189506434,2.78240763346732,2.50937251565324,3.29697328466887,3.33172342588861,6.81841042300442,1.50160595144485,2.55526693647164,3.59779379815766,3.85434230638156,1.68824011826692,5.60176873919124,4.60313819921297,2.7562988551756,6.86403532970204,12.9391385874619,10.0478055870496,10.2972432127805,8.5876818502018,10.9432422248366,3.85954817090694,2.95605104266567,4.73728529426212,2.28150967018836,3.39490171550376,2.11221223459652,3.01511263395268,3.09456733151818,4.29294025287157,2.52216230569906,3.76489972402917,4.30527875375215,3.93271955317771,4.48980952851328,4.05017364028232,1.50791283939272,2.71952841909355,3.44234991113325,6.89841865761831,4.65596710964597,7.501547941901,2.78689407140348,7.32165688892682,1.26203287766503,0.390438744296638,1.93881057959519,1.43381278771531,1.33679204449436,1.41538265394416,2.02405350837447,3.21481443702443,1.18586333383957,5.78378369559253,3.69044221541498,2.49291845134157,1.95464351224291,3.13443233647817,0,1.94224508923985,3.02323556964751,5.09233715340925,3.54362271456927,4.61152721915891,4.13485269069154,2.18120237686503,3.56497378384721,5.68866164284469,2.10837217149998,6.18813259489121,3.74483566329167,2.16073312837572,2.45781499187234,2.7863814554107,3.01478397191865,3.38900753443934,3.29098041204242,2.74018454203139,3.05073220482823,4.66030555900404,2.64634077665954,1.6488625294148,2.58343082713449,2.83470747162333,2.626191568069,2.46211349617592,7.28702091574627,5.00648315428376,2.39219233116994,3.09580301944834,2.77791791054568,2.0720530270516,0.956859594047176,1.60144721244566,4.24946074984638,5.17820373597535,4.14599921413271,4.77335309007557,1.26534397432454,2.43983360552218,2.16010681643603,2.71814784818809,3.7121635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| |||
|short_description=p4@Scp2 | |||
}} | |||
Revision as of 03:23, 14 September 2013
| Short description: | p4@Scp2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Scp2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000030340, NM_011327_5end |
| EntrezGene: | Scp2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 5.59e-07 | 122 |
| tube | 9.23e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
