FFCP PHASE1:Mm9::chr4:129317858..129317904,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109658|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142577_5end|description=CAGE_peak_2_at_Txlna_5end|id=chr4:129317858..129317904,-|ontology_enrichment_celltype=CL:0002319!1.09e-08!43;CL:0000221!1.23e-08!44;CL:0000133!1.23e-08!44;CL:0000055!3.74e-08!50;CL:0000393!4.50e-08!39;CL:0000211!4.50e-08!39;CL:0000540!5.56e-08!33;CL:0000047!5.56e-08!33;CL:0000031!5.56e-08!33;CL:0000404!5.56e-08!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.09e-08,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000393,4.50e-08,39;CL:0000211,4.50e-08,39;CL:0000540,5.55e-08,33;CL:0000047,5.55e-08,33;CL:0000031,5.55e-08,33;CL:0000404,5.55e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.08e-07!75;UBERON:0001016!4.08e-07!75;UBERON:0001017!7.09e-07!73;UBERON:0005743!7.09e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.07e-07,75;UBERON:0001017,7.09e-07,73|phase1_expression=9.44878197918284,3.48975407639361,0.909998478779072,0.30246421130683,0.500895729946347,4.19698179779725,2.33612640595526,3.35720640948098,5.34997144176334,6.55380673701582,1.88339765048055,5.66382328866889,1.02720437958723,2.09808965805594,2.6648780945253,1.21485160433896,1.39912375625629,1.10411757875383,0.548457734422955,0.42438965179803,5.27268398936633,6.85107563286109,8.097193463307,1.75991665072747,0.91763712426868,1.14846392823004,2.15380998079537,3.66301095566011,1.71021077510736,2.01624103807945,3.76941868114018,6.35030673459631,2.46025915033828,0,1.73310971850765,0.831173226792462,2.24586291888606,5.85944283031671,2.3440060335714,6.80580867165938,7.05877785637217,2.73218193983378,3.88408282424923,5.03587271902309,4.66333883609767,5.13930906052708,9.38869613217647,6.32272953503295,10.1055644057857,10.304784650937,9.23910382727393,8.62515386189829,3.18786951509699,0,4.7053131879945,10.5476368774738,10.601737277734,13.4074743992135,10.1158230429799,13.2247744818008,14.5781222806421,11.5207140903505,5.33576877666684,7.64914759689189,5.93319817540185,4.2628806896766,4.79360176829448,5.37905627450176,16.9014068062819,18.0907957364465,10.7265730289205,6.28432165688368,5.74258206474195,12.8615339175702,19.456630616702,19.3035945188104,6.60695285996332,4.85211884723713,5.83704826373725,12.6610836220986,16.8337264228434,14.0646610050325,6.70039197603314,3.37657566019008,5.04234217663473,3.83017161115768,6.69146899755784,7.64237727883732,6.73963120665338,9.8998743739889,8.40607017234866,0.860423876981386,3.39985666853875,5.39703191637817,0.649776417447669,1.79210754838934,2.80888840263504,4.77204903218562,4.1565760736459,5.3000936176551,6.90132756905734,3.84979432242953,7.64415719119937,0,1.5154372870785,2.02687892380079,2.02209778005913,2.39786147410026,1.8125651855302,5.78924342352817,13.0113995074602,7.30717147949139,7.61031140944993,5.87818298155228,5.99702406392095,4.27266410520897,6.92145909656247,2.89198713839823,3.5384422077995,8.08834249737046,4.85851340612866,6.78825354389311,0,5.5628351432194,5.44561437714983,2.04365644166873,5.51149572727233,7.19883277192089,6.09937089950711,2.99581278809645,3.66000482254901,11.4345460422707,4.34560800480691,4.85859368927628,2.70124457927428,4.54275536589721,7.84163101647435,7.0911973247753,4.29628689337247,0.841767423545896,9.23855145035196,7.35686734187113,8.28285797104606,9.79581315932148,6.12328492361951,6.40568601424249,4.96619140166563,3.3631438196072,10.3472636607764,14.9393803332577,18.2989169130507,13.5901354105096,15.5706459566335,13.9300866608867,11.5237996388448,13.9323986772945,4.91549231119264,7.46308930632674,8.24074148247219,9.94203708170409,9.85009451920604,7.92273070428465,8.28606574548236,5.90292695242211,7.40482141859416,6.51095045301142,4.82892122519315,3.61972561338225,3.62031669809657,4.10418660197738,2.51313309592153,1.90059983652932,1.97595103761946,1.20785776884335,6.51898840548794,10.7020796874456,0.330418782983798,2.11560453330835,14.7168892869311,10.9151235774406,6.05677068213839,6.85723983719365,6.0042071838115,4.1849637744763,4.2707615539006,2.47048432086016,2.5133520880027,4.77495532898762,3.50935356814416,4.49409704327111,2.16138049874694,2.38969527905241,10.6214024533726,7.31190480702264,3.38123207019241,8.96065842519383,7.17624202520215,4.48869247298039,5.1853960441891,3.09981310757165,1.72698600625512,2.46794327843601,2.96452627087149,5.83957870006329,6.09332884850929,4.72210436008193,5.68008339887808,3.61765739628625,4.32863948028414,3.45235364940973,2.10775794807546,2.19649130550465,7.18841032636773,2.97712758134803,3.43241440426017,0.757736633841335,2.69096120282868,1.4473305640901,3.8798169934987,11.7484675297701,9.28900365719548,9.33597971763535,8.21415869009757,10.2178817039508,9.75978927632656,11.9031525193257,8.6699329258405,8.19419351700467,9.8861956567642,7.37384916220821,6.56202931090403,7.5217510462386,9.04747703635634,13.5976420954677,3.44234991113325,5.24279817978992,2.24770825982909,5.50894926983355,10.0000316679772,1.51482556322624,9.14973836307144,11.322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| ||
|EntrezGene=109658 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000142577_5end | |||
|description=CAGE_peak_2_at_Txlna_5end | |||
|id=chr4:129317858..129317904,- | |||
|ontology_enrichment_celltype=CL:0002319!1.09e-08!43;CL:0000221!1.23e-08!44;CL:0000133!1.23e-08!44;CL:0000055!3.74e-08!50;CL:0000393!4.50e-08!39;CL:0000211!4.50e-08!39;CL:0000540!5.56e-08!33;CL:0000047!5.56e-08!33;CL:0000031!5.56e-08!33;CL:0000404!5.56e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.09e-08,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000393,4.50e-08,39;CL:0000211,4.50e-08,39;CL:0000540,5.55e-08,33;CL:0000047,5.55e-08,33;CL:0000031,5.55e-08,33;CL:0000404,5.55e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.08e-07!75;UBERON:0001016!4.08e-07!75;UBERON:0001017!7.09e-07!73;UBERON:0005743!7.09e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.07e-07,75;UBERON:0001017,7.09e-07,73 | |||
|phase1_expression=9.44878197918284,3.48975407639361,0.909998478779072,0.30246421130683,0.500895729946347,4.19698179779725,2.33612640595526,3.35720640948098,5.34997144176334,6.55380673701582,1.88339765048055,5.66382328866889,1.02720437958723,2.09808965805594,2.6648780945253,1.21485160433896,1.39912375625629,1.10411757875383,0.548457734422955,0.42438965179803,5.27268398936633,6.85107563286109,8.097193463307,1.75991665072747,0.91763712426868,1.14846392823004,2.15380998079537,3.66301095566011,1.71021077510736,2.01624103807945,3.76941868114018,6.35030673459631,2.46025915033828,0,1.73310971850765,0.831173226792462,2.24586291888606,5.85944283031671,2.3440060335714,6.80580867165938,7.05877785637217,2.73218193983378,3.88408282424923,5.03587271902309,4.66333883609767,5.13930906052708,9.38869613217647,6.32272953503295,10.1055644057857,10.304784650937,9.23910382727393,8.62515386189829,3.18786951509699,0,4.7053131879945,10.5476368774738,10.601737277734,13.4074743992135,10.1158230429799,13.2247744818008,14.5781222806421,11.5207140903505,5.33576877666684,7.64914759689189,5.93319817540185,4.2628806896766,4.79360176829448,5.37905627450176,16.9014068062819,18.0907957364465,10.7265730289205,6.28432165688368,5.74258206474195,12.8615339175702,19.456630616702,19.3035945188104,6.60695285996332,4.85211884723713,5.83704826373725,12.6610836220986,16.8337264228434,14.0646610050325,6.70039197603314,3.37657566019008,5.04234217663473,3.83017161115768,6.69146899755784,7.64237727883732,6.73963120665338,9.8998743739889,8.40607017234866,0.860423876981386,3.39985666853875,5.39703191637817,0.649776417447669,1.79210754838934,2.80888840263504,4.77204903218562,4.1565760736459,5.3000936176551,6.90132756905734,3.84979432242953,7.64415719119937,0,1.5154372870785,2.02687892380079,2.02209778005913,2.39786147410026,1.8125651855302,5.78924342352817,13.0113995074602,7.30717147949139,7.61031140944993,5.87818298155228,5.99702406392095,4.27266410520897,6.92145909656247,2.89198713839823,3.5384422077995,8.08834249737046,4.85851340612866,6.78825354389311,0,5.5628351432194,5.44561437714983,2.04365644166873,5.51149572727233,7.19883277192089,6.09937089950711,2.99581278809645,3.66000482254901,11.4345460422707,4.34560800480691,4.85859368927628,2.70124457927428,4.54275536589721,7.84163101647435,7.0911973247753,4.29628689337247,0.841767423545896,9.23855145035196,7.35686734187113,8.28285797104606,9.79581315932148,6.12328492361951,6.40568601424249,4.96619140166563,3.3631438196072,10.3472636607764,14.9393803332577,18.2989169130507,13.5901354105096,15.5706459566335,13.9300866608867,11.5237996388448,13.9323986772945,4.91549231119264,7.46308930632674,8.24074148247219,9.94203708170409,9.85009451920604,7.92273070428465,8.28606574548236,5.90292695242211,7.40482141859416,6.51095045301142,4.82892122519315,3.61972561338225,3.62031669809657,4.10418660197738,2.51313309592153,1.90059983652932,1.97595103761946,1.20785776884335,6.51898840548794,10.7020796874456,0.330418782983798,2.11560453330835,14.7168892869311,10.9151235774406,6.05677068213839,6.85723983719365,6.0042071838115,4.1849637744763,4.2707615539006,2.47048432086016,2.5133520880027,4.77495532898762,3.50935356814416,4.49409704327111,2.16138049874694,2.38969527905241,10.6214024533726,7.31190480702264,3.38123207019241,8.96065842519383,7.17624202520215,4.48869247298039,5.1853960441891,3.09981310757165,1.72698600625512,2.46794327843601,2.96452627087149,5.83957870006329,6.09332884850929,4.72210436008193,5.68008339887808,3.61765739628625,4.32863948028414,3.45235364940973,2.10775794807546,2.19649130550465,7.18841032636773,2.97712758134803,3.43241440426017,0.757736633841335,2.69096120282868,1.4473305640901,3.8798169934987,11.7484675297701,9.28900365719548,9.33597971763535,8.21415869009757,10.2178817039508,9.75978927632656,11.9031525193257,8.6699329258405,8.19419351700467,9.8861956567642,7.37384916220821,6.56202931090403,7.5217510462386,9.04747703635634,13.5976420954677,3.44234991113325,5.24279817978992,2.24770825982909,5.50894926983355,10.0000316679772,1.51482556322624,9.14973836307144,11.3227235846025,15.5104846367615,16.9667846546312,14.4819138153556,11.6061377623421,13.3587531552715,10.5212108848072,10.2774822266096,4.17717711348349,5.96148357874728,14.0671826897132,7.4928001302645,5.60898418106621,6.63725691699814,13.110154352369,12.09294227859,8.48722858901541,8.26845300066164,9.22305443831782,6.46070732920553,3.99887102425256,4.27796854061666,6.0046984007805,5.27093042874994,3.09406629744561,6.46835250932197,13.5045820523483,18.3689330971511,19.7190072229065,17.2020026633005,19.0854634834215,14.4803138129866,8.52501857520878,4.69343416127421,8.04961869282517,8.38007912608855,3.46261131177108,9.04200789497071,7.65974146587579,6.08798954415996,7.55048138827282,2.91480836629851,5.19190845629427,3.07567585436135,13.6215332855727,10.0005044779644,3.57900068308913,2.46049609897845,2.51655990527175,11.5585332395822,10.4963589242744,7.04819866402561,0,11.3880957689209,8.94605655358134,8.3164112432787,10.4544148007234,9.1712276773394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| |||
|short_description=p2@Txlna | |||
}} |
Revision as of 03:53, 14 September 2013
Short description: | p2@Txlna |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Txlna_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000142577_5end |
EntrezGene: | Txlna |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.09e-08 | 43 |
ectodermal cell | 1.23e-08 | 44 |
neurectodermal cell | 1.23e-08 | 44 |
electrically responsive cell | 4.50e-08 | 39 |
electrically active cell | 4.50e-08 | 39 |
neuron | 5.55e-08 | 33 |
neuronal stem cell | 5.55e-08 | 33 |
neuroblast | 5.55e-08 | 33 |
electrically signaling cell | 5.55e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.07e-07 | 75 |
central nervous system | 7.09e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.