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FFCP PHASE1:Mm9::chr4:135502362..135502410,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=15356|HGNC=|MCL_coexpression_id=8|UniProt=P38060|association_with_transcript=0bp_to_ENSMUST00000030432,ENSMUST00000134135,NM_008254,uc012dnc.1_5end|description=CAGE_peak_1_at_Hmgcl_5end|id=chr4:135502362..135502410,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!6.28e-10!23;UBERON:0009856!6.28e-10!23;UBERON:0002107!1.83e-09!22;UBERON:0007499!1.83e-09!22;UBERON:0006925!1.83e-09!22;UBERON:0009497!1.83e-09!22;UBERON:0000015!1.83e-09!22;UBERON:0002423!1.83e-09!22;UBERON:0006235!1.83e-09!22;UBERON:0008835!1.83e-09!22;UBERON:0003894!1.83e-09!22;UBERON:0004161!1.83e-09!22;UBERON:0008836!1.83e-09!22;UBERON:0002365!6.14e-09!25;UBERON:0002330!6.14e-09!25;UBERON:0005172!6.49e-07!49;UBERON:0005173!6.49e-07!49;UBERON:0002417!6.49e-07!49;UBERON:0000916!6.49e-07!49;UBERON:0000344!6.58e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.28e-10,23;UBERON:0009856,6.28e-10,23;UBERON:0005409,8.12e-10,47;UBERON:0000160,1.39e-09,31;UBERON:0002107,1.83e-09,22;UBERON:0007499,1.83e-09,22;UBERON:0006925,1.83e-09,22;UBERON:0009497,1.83e-09,22;UBERON:0000015,1.83e-09,22;UBERON:0002423,1.83e-09,22;UBERON:0006235,1.83e-09,22;UBERON:0008835,1.83e-09,22;UBERON:0003894,1.83e-09,22;UBERON:0004161,1.83e-09,22;UBERON:0008836,1.83e-09,22;UBERON:0002365,6.14e-09,25;UBERON:0002330,6.14e-09,25;UBERON:0005172,6.49e-07,49;UBERON:0005173,6.49e-07,49;UBERON:0002417,6.49e-07,49;UBERON:0000916,6.49e-07,49;UBERON:0000344,6.58e-07,15|phase1_expression=31.06887633833,67.3522536743967,71.8898798235467,63.8199485857411,58.1039046737763,32.9043372947304,31.7713191209915,18.8520052224701,15.9091256031383,11.9372908424217,8.38968044304974,8.45584885350566,19.8592846720199,18.0086028983135,38.3076226088012,29.1564385041349,43.3728364439451,20.1895785829272,20.5671650408608,30.1316652776601,24.6625541438102,18.2695350209629,18.8063848180033,36.1582875513099,41.9818984352921,76.9470831914127,65.9065854123384,50.8512109138698,72.7789696517912,60.4872311423834,56.763010727758,29.211410979143,31.9833689543976,15.8481681015439,36.1064524689093,36.9040912695853,32.4629276457167,75.7542251633803,78.9148697969038,65.4404679967248,85.2935657644971,92.2111404693902,75.2541047198288,10.5753327099485,8.41428529121971,9.17733760808408,46.9434806608824,39.6805784612413,32.5135550447018,24.4981672833597,27.7173114818218,34.5006154475932,18.456086666351,15.9579671242496,11.4271891708438,17.7509010864803,18.0516067161417,15.4701627683233,22.2548106945558,15.869729378161,24.0855933332348,40.6613438482959,33.7932022522233,78.2912754034817,81.0870417304919,88.8100143682625,55.7256205564233,59.553837324841,15.6571314585801,15.6606888464761,20.1911962897327,31.1359573000146,33.130281142742,18.3736198822431,17.827257609392,12.8690630125403,29.731287869835,20.42997409363,16.8967186581868,23.0801003527839,22.6889356133976,20.3156214517136,28.7558488971422,20.2594539611405,20.3221669543157,22.9810296669461,19.7896636310753,23.1135312823373,18.7043697532965,18.8173184665896,26.087803983151,214.245545368365,216.230884119065,246.104655386845,217.675099844969,213.260798258332,59.2675452955993,11.2484012901518,20.5230943636266,12.0135455333516,22.6757905840456,20.5322363862909,30.5766287647975,0,8.22665955842614,7.85415582972806,7.07734223020697,105.62008874013,9.83963957859253,20.1881309128162,23.2470337866622,28.3152894830291,24.9064737036543,34.6662073271032,20.1076689202055,20.4836543867371,43.7535092889842,19.665512541108,25.6537060065464,24.103260642164,22.3049933644997,27.1530141755724,59.6453635897991,28.6925181071316,41.4704479490641,40.3622147229574,16.534487181817,33.5945529356308,22.8726408731516,15.4284358586967,21.5025283324754,14.4502504929794,14.6012428961512,16.3657892691412,18.4931359658008,18.9822277789276,20.2660334062129,20.1539292388351,19.459652399393,19.1502088856691,18.4771029007039,15.6333431014762,13.6847218652065,21.5507889505073,13.8114093277196,16.0142150356062,16.7726086961915,18.8853460639481,11.6406716183735,11.535470890237,14.4279921814438,14.6861140726475,20.5754964426942,16.716103993064,18.9319565495308,18.3111525473014,28.7907406798426,24.7053990830127,20.7439354558783,17.6056906655177,21.1073453982987,20.5270750065557,17.7558551688908,20.0699516382352,25.7626078521922,29.9968788728026,26.8273401399619,27.6733861410192,30.1144525341669,35.6243397051637,32.3464550087964,35.8189969192064,29.8588156795829,42.4092283282775,14.930586348053,15.3327872445134,59.4753809370836,51.038959366064,18.1295012954949,17.1855137176724,13.6599509001419,25.4121241025412,38.4714015851626,46.4150527714644,49.3510224006292,73.1263358974608,66.6038303320714,68.8389393262382,55.174836654711,35.9527763461689,51.8731319699266,57.1535454240034,22.1911444115106,15.0808036644842,18.0332377076929,19.9578301288408,24.8259183574561,23.8461787627083,27.2549475005549,51.5159416448812,63.7414835035982,67.2514543373813,162.752492270845,15.5165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|EntrezGene=15356
|HGNC=
|MCL_coexpression_id=8
|UniProt=P38060
|association_with_transcript=0bp_to_ENSMUST00000030432,ENSMUST00000134135,NM_008254,uc012dnc.1_5end
|description=CAGE_peak_1_at_Hmgcl_5end
|id=chr4:135502362..135502410,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!6.28e-10!23;UBERON:0009856!6.28e-10!23;UBERON:0002107!1.83e-09!22;UBERON:0007499!1.83e-09!22;UBERON:0006925!1.83e-09!22;UBERON:0009497!1.83e-09!22;UBERON:0000015!1.83e-09!22;UBERON:0002423!1.83e-09!22;UBERON:0006235!1.83e-09!22;UBERON:0008835!1.83e-09!22;UBERON:0003894!1.83e-09!22;UBERON:0004161!1.83e-09!22;UBERON:0008836!1.83e-09!22;UBERON:0002365!6.14e-09!25;UBERON:0002330!6.14e-09!25;UBERON:0005172!6.49e-07!49;UBERON:0005173!6.49e-07!49;UBERON:0002417!6.49e-07!49;UBERON:0000916!6.49e-07!49;UBERON:0000344!6.58e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0009854,6.28e-10,23;UBERON:0009856,6.28e-10,23;UBERON:0005409,8.12e-10,47;UBERON:0000160,1.39e-09,31;UBERON:0002107,1.83e-09,22;UBERON:0007499,1.83e-09,22;UBERON:0006925,1.83e-09,22;UBERON:0009497,1.83e-09,22;UBERON:0000015,1.83e-09,22;UBERON:0002423,1.83e-09,22;UBERON:0006235,1.83e-09,22;UBERON:0008835,1.83e-09,22;UBERON:0003894,1.83e-09,22;UBERON:0004161,1.83e-09,22;UBERON:0008836,1.83e-09,22;UBERON:0002365,6.14e-09,25;UBERON:0002330,6.14e-09,25;UBERON:0005172,6.49e-07,49;UBERON:0005173,6.49e-07,49;UBERON:0002417,6.49e-07,49;UBERON:0000916,6.49e-07,49;UBERON:0000344,6.58e-07,15
|phase1_expression=31.06887633833,67.3522536743967,71.8898798235467,63.8199485857411,58.1039046737763,32.9043372947304,31.7713191209915,18.8520052224701,15.9091256031383,11.9372908424217,8.38968044304974,8.45584885350566,19.8592846720199,18.0086028983135,38.3076226088012,29.1564385041349,43.3728364439451,20.1895785829272,20.5671650408608,30.1316652776601,24.6625541438102,18.2695350209629,18.8063848180033,36.1582875513099,41.9818984352921,76.9470831914127,65.9065854123384,50.8512109138698,72.7789696517912,60.4872311423834,56.763010727758,29.211410979143,31.9833689543976,15.8481681015439,36.1064524689093,36.9040912695853,32.4629276457167,75.7542251633803,78.9148697969038,65.4404679967248,85.2935657644971,92.2111404693902,75.2541047198288,10.5753327099485,8.41428529121971,9.17733760808408,46.9434806608824,39.6805784612413,32.5135550447018,24.4981672833597,27.7173114818218,34.5006154475932,18.456086666351,15.9579671242496,11.4271891708438,17.7509010864803,18.0516067161417,15.4701627683233,22.2548106945558,15.869729378161,24.0855933332348,40.6613438482959,33.7932022522233,78.2912754034817,81.0870417304919,88.8100143682625,55.7256205564233,59.553837324841,15.6571314585801,15.6606888464761,20.1911962897327,31.1359573000146,33.130281142742,18.3736198822431,17.827257609392,12.8690630125403,29.731287869835,20.42997409363,16.8967186581868,23.0801003527839,22.6889356133976,20.3156214517136,28.7558488971422,20.2594539611405,20.3221669543157,22.9810296669461,19.7896636310753,23.1135312823373,18.7043697532965,18.8173184665896,26.087803983151,214.245545368365,216.230884119065,246.104655386845,217.675099844969,213.260798258332,59.2675452955993,11.2484012901518,20.5230943636266,12.0135455333516,22.6757905840456,20.5322363862909,30.5766287647975,0,8.22665955842614,7.85415582972806,7.07734223020697,105.62008874013,9.83963957859253,20.1881309128162,23.2470337866622,28.3152894830291,24.9064737036543,34.6662073271032,20.1076689202055,20.4836543867371,43.7535092889842,19.665512541108,25.6537060065464,24.103260642164,22.3049933644997,27.1530141755724,59.6453635897991,28.6925181071316,41.4704479490641,40.3622147229574,16.534487181817,33.5945529356308,22.8726408731516,15.4284358586967,21.5025283324754,14.4502504929794,14.6012428961512,16.3657892691412,18.4931359658008,18.9822277789276,20.2660334062129,20.1539292388351,19.459652399393,19.1502088856691,18.4771029007039,15.6333431014762,13.6847218652065,21.5507889505073,13.8114093277196,16.0142150356062,16.7726086961915,18.8853460639481,11.6406716183735,11.535470890237,14.4279921814438,14.6861140726475,20.5754964426942,16.716103993064,18.9319565495308,18.3111525473014,28.7907406798426,24.7053990830127,20.7439354558783,17.6056906655177,21.1073453982987,20.5270750065557,17.7558551688908,20.0699516382352,25.7626078521922,29.9968788728026,26.8273401399619,27.6733861410192,30.1144525341669,35.6243397051637,32.3464550087964,35.8189969192064,29.8588156795829,42.4092283282775,14.930586348053,15.3327872445134,59.4753809370836,51.038959366064,18.1295012954949,17.1855137176724,13.6599509001419,25.4121241025412,38.4714015851626,46.4150527714644,49.3510224006292,73.1263358974608,66.6038303320714,68.8389393262382,55.174836654711,35.9527763461689,51.8731319699266,57.1535454240034,22.1911444115106,15.0808036644842,18.0332377076929,19.9578301288408,24.8259183574561,23.8461787627083,27.2549475005549,51.5159416448812,63.7414835035982,67.2514543373813,162.752492270845,15.5165948315967,17.6903095601883,24.0602460251793,28.8061372371674,33.5236252055859,60.8555785757593,53.7991777033016,119.169391679651,154.852637038078,136.579796200987,171.55697687518,189.406867580538,198.274419188483,157.690326485761,179.951433468536,19.2143317773269,19.5176154123599,17.1113225264127,16.1257831486429,13.3773441524446,16.0806007144143,14.7587057349329,18.7328301943487,14.9753386900881,19.2674279994434,13.7131101045439,22.1215474866246,22.2763626607005,23.5777965487864,78.4114676484216,44.0563603893155,21.6376280128376,20.9711927191597,17.5000143086693,19.2227166011213,10.3279015587306,34.5885170269991,26.1871822115493,26.1593958678748,18.5264122050207,25.5696613809231,24.9534514972281,26.3261173633614,27.9319384155677,23.0882127749936,15.8115111178609,15.7447445046685,11.9229671574946,31.6956774527714,20.1979829598434,15.1772513134733,11.9470624505967,21.3646959816384,28.1160907977218,23.0098197302196,18.0134154657271,16.908933136916,28.6855405416725,16.7225515559653,14.9728898921583,13.2735438333043,22.1379078007497,12.3762651897824,18.0432991049508,15.665315180724,19.6625199349787,19.0759961178117,16.3153014950892,19.9773075714319,19.4167844310503,22.8348711835949,23.2324990983073,37.9179406846238,33.7408449024092,13.3557864882599,11.6254387221052,12.9069659346254,16.1152664404234,13.1312719796049,43.7221254944776,14.4631735568198,18.1123133645724,28.4813877789247,21.4825651748866,25.9948470666474,21.734382207643,22.6490391474457,13.9382312594961,14.4149995893368,15.2019971184866,44.8695190467103,13.91878371757,15.2489600345137,25.8132764564105,29.0632731460112,41.7072496755199,38.4363387196739,48.1043112321455,36.1223199937961,102.525443873808,28.5816084019986,3.94585057078933,15.2506876964858,22.8332716830795,17.8895093276524,20.0197726390483,18.7541299294764,14.787012069365,14.1922779479906,13.6317147753424,11.1128695579963,10.0810502190253,13.2724670663835,21.0834223901771,19.7205037756468,17.4093902790245,13.9640822620636,15.2984643181574,13.9426721443164,15.5074003533306,14.2362694426888,15.012740911035,15.0231015853892,13.8390190650448,14.2393525627688,18.4665505446879,19.272082607293,19.7567498502918,10.1376657968708,16.1169231709515,23.9555096599916,29.4661486458356,16.4836461840539,9.21784030039983,19.5613120573792,12.4245405375755,17.0320337507655,10.3121192419091,14.0919609521824,14.3867329151835,20.3956352295219,18.2256075062588,21.1650965515384,16.3131267234314,10.3552062350364,13.9075045762797,8.77854721482268,20.317299084742,16.2881500435757,22.4286084011941,26.8411522337021,22.8914129635664,26.5785223838174,21.5015870426516,19.4576853058124,20.0248646913289,19.9943921869241,23.9722259122899,24.7777339806844,22.7444457064229,23.3383908728706,21.670368951688,24.6923802193542,21.8405527425753,25.7598110235195,28.4581479479895,28.0411773731753,24.7973637545214,25.2902764940252,25.7859702338006,22.4228710912943,27.0733399851703,22.6239951836545,22.9508952399506,17.9565526930476,20.0493180629854,25.0201385233931,24.9630936333511,25.2547051133125,21.6055404298878,14.2392029424629,21.5217079769776,27.2886238641339,21.6155815237793,21.838550492832,26.2010654251076
|short_description=p1@Hmgcl
}}

Revision as of 04:07, 14 September 2013

Short description:p1@Hmgcl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmgcl_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000030432, ENSMUST00000134135, NM_008254, uc012dnc.1_5end
EntrezGene:Hmgcl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hmgcl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G731.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I567.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I671.89
CD326+ enterocyte, pool1.CNhs13542.11848-124I363.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I458.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A138.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A543.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.57
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.98
GP2+ M cell, pool1.CNhs13228.11845-124H976.95
GP2+ M cell, pool2.CNhs13231.11846-124I165.91
GP2+ M cell, pool3.CNhs13240.11847-124I250.85
Ileum epithelium, pool1.CNhs13199.10252-104B972.78
Ileum epithelium, pool2.CNhs13232.10253-104C160.49
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C856.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I329.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G631.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G875.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H178.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H365.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G985.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H292.21
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H475.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.94
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C322.25
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C724.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C640.66
Mouse Meningeal cells, donor3.CNhs12109.11639-122D133.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C778.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E781.09
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D288.81
Mouse Microglia, donor1.CNhs12629.11718-123C855.73
Mouse Microglia, donor2.CNhs12634.11736-123E859.55
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.13
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.11
Mouse Schwann, donor1.CNhs12507.11728-123D918.70
Mouse Schwann, donor2.CNhs12573.11746-123F918.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7214.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C4216.23
Mouse hepatocyte, donor3.CNhs12615.11637-122C8246.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F4217.68
Mouse hepatocyte, donor8.CNhs13091.11824-124F6213.26
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A759.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6105.62
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D720.19
adrenal gland, embryo E14.CNhs11038.406-44C523.25
adrenal gland, embryo E16.CNhs11004.1254-43D628.32
adrenal gland, embryo E17.CNhs11043.1263-45I124.91
adrenal gland, embryo E18.CNhs11026.1262-18F534.67
adrenal gland, neonate N00.CNhs11191.1311-23C120.11
adrenal gland, neonate N25.CNhs11223.1377-27I320.48
amnion, adult pregnant day17.5.CNhs10488.583-22A843.75
aorta, adult.CNhs10498.46-23H119.67
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F524.10
bone (os femoris), neonate N16.CNhs11225.1525-43A622.30
bone (os femoris), neonate N20.CNhs11195.1350-25C327.15
cecum, adult.CNhs10467.37-13H459.65
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I241.47
colon, adult.CNhs10468.36-18H740.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.87
corpora quadrigemina, adult.CNhs10501.16-22A415.43
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F114.45
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F216.37
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.15
epididymis, adult.CNhs10490.58-23B219.46
eyeball, adult.CNhs10484.31-12G419.15
eyeball, embryo E12.CNhs11016.345-16C618.48
eyeball, embryo E14.CNhs10521.399-16E215.63
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D421.55
eyeball, neonate N00.CNhs11207.633-15C613.81
eyeball, neonate N01.CNhs11140.1532-43E716.01
eyeball, neonate N02.CNhs11205.1551-44G816.77
eyeball, neonate N16.CNhs11188.777-19A218.89
forelimb, embryo E11.CNhs10596.335-25E211.64
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A814.69
forelimb, embryo E15.CNhs11007.437-20E720.58
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B518.93
gonad, embryo E13.CNhs11044.1564-45I618.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C828.79
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.74
heart, embryo E11.CNhs10586.331-24E917.61
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I920.53
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C820.07
heart, embryo E16.CNhs11021.457-17C625.76
heart, embryo E17.CNhs11025.479-18E530.00
heart, embryo E18.CNhs11030.1283-20G326.83
heart, neonate N00.CNhs11213.639-21E327.67
heart, neonate N03.CNhs11221.1349-25I230.11
heart, neonate N10.CNhs11118.749-24G135.62
heart, neonate N16.CNhs11209.782-15G132.35
heart, neonate N20.CNhs11127.821-26I635.82
heart, neonate N25.CNhs11196.1351-25D329.86
heart, neonate N30.CNhs11202.1390-42D242.41
hippocampus, adult.CNhs10478.13-16E814.93
hippocampus, neonate N00.CNhs11228.627-43G115.33
intestinal mucosa, adult.CNhs10506.860-29I359.48
intestine, adult.CNhs10496.178-9A351.04
intestine, embryo E12.CNhs11019.1251-16I518.13
intestine, embryo E13.CNhs11010.381-16D517.19
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H425.41
intestine, embryo E17.CNhs10582.482-18D338.47
intestine, embryo E18.CNhs10526.1289-20F746.42
intestine, neonate N00.CNhs11126.644-26D149.35
intestine, neonate N01.CNhs11192.1322-23E973.13
intestine, neonate N06.CNhs11102.688-20B866.60
intestine, neonate N07.CNhs11095.720-20F268.84
intestine, neonate N10.CNhs11098.755-23A555.17
intestine, neonate N20.CNhs11187.827-18D135.95
intestine, neonate N25.CNhs11121.1352-25E351.87
intestine, neonate N30.CNhs11131.1384-42G157.15
kidney, embryo E14.CNhs10606.411-4I922.19
kidney, embryo E15.CNhs10997.434-16F815.08
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C724.83
kidney, neonate N00.CNhs11214.646-21G723.85
kidney, neonate N10.CNhs11206.758-6D527.25
kidney, neonate N20.CNhs11113.832-19I151.52
kidney, neonate N25.CNhs11122.1353-25F363.74
kidney, neonate N30.CNhs11203.1385-42H167.25
liver, adult pregnant day01.CNhs10466.508-5B2162.75
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H617.69
liver, embryo E14.CNhs10594.409-16E124.06
liver, embryo E15.CNhs10520.433-16D728.81
liver, embryo E16.CNhs10523.462-17F533.52
liver, embryo E17.CNhs10510.481-18A360.86
liver, embryo E18.CNhs10579.499-43G453.80
liver, neonate N00.CNhs11117.641-24F4119.17
liver, neonate N03.CNhs11123.1345-25G2154.85
liver, neonate N06.CNhs11101.684-20A8136.58
liver, neonate N07.CNhs11103.716-20H2171.56
liver, neonate N10.CNhs11115.751-24B9189.41
liver, neonate N20.CNhs11220.823-25A3198.27
liver, neonate N25.CNhs11198.1368-26H1157.69
liver, neonate N30.CNhs11106.1382-42D1179.95
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G219.52
lung, embryo E14.CNhs10604.404-26F817.11
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A616.08
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C618.73
lung, neonate N06.CNhs11212.683-20E514.98
lung, neonate N07.CNhs11111.715-19A319.27
lung, neonate N10.CNhs11219.750-23E613.71
lung, neonate N20.CNhs11109.822-18A422.12
lung, neonate N25.CNhs11119.1359-25C722.28
lung, neonate N30.CNhs11133.1394-42H223.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A178.41
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A144.06
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A319.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C234.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.16
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.57
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.95
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H731.70
ovary, neonate N00.CNhs11217.1299-22I420.20
oviduct, adult pregnant day01.CNhs10500.988-6G615.18
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F421.36
pancreas, embryo E15.CNhs11042.1556-45F228.12
pancreas, embryo E16.CNhs11003.460-26E523.01
pancreas, embryo E17.CNhs10599.1558-45G318.01
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G928.69
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E615.67
pituitary gland, embryo E13.CNhs11009.370-44C719.66
pituitary gland, embryo E14.CNhs11037.398-44A519.08
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F619.98
pituitary gland, embryo E17.CNhs11039.1265-44F519.42
pituitary gland, neonate N00.CNhs11190.1308-22E922.83
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G337.92
prostate, adult.CNhs10470.859-1F833.74
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G411.63
skin, neonate N03.CNhs11215.662-22H312.91
skin, neonate N06.CNhs11097.693-20I516.12
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I143.72
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G218.11
spleen, embryo E16.CNhs11035.461-43C128.48
spleen, embryo E18.CNhs11011.1271-21F221.48
spleen, neonate N10.CNhs11116.752-24D125.99
spleen, neonate N20.CNhs11112.824-19H121.73
spleen, neonate N25.CNhs11099.1354-25G322.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.20
stomach, adult.CNhs10503.33-1H644.87
stomach, embryo E12.CNhs10588.356-43E313.92
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D425.81
stomach, embryo E17.CNhs11006.1035-18D529.06
stomach, embryo E18.CNhs10999.1286-20C641.71
stomach, neonate N03.CNhs11193.1340-24B838.44
stomach, neonate N07.CNhs11210.718-18A948.10
stomach, neonate N25.CNhs11104.1355-25E436.12
stomach, neonate N30.CNhs11134.1386-42I1102.53
submandibular gland, adult.CNhs10469.59-29C128.58
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F515.25
testis, embryo E15.CNhs11034.443-27C522.83
testis, embryo E16.CNhs11033.470-26G517.89
testis, embryo E17.CNhs11029.486-18I520.02
testis, embryo E18.CNhs11027.503-18G518.75
testis, neonate N00.CNhs11189.1300-22B714.79
testis, neonate N07.CNhs11222.726-26I414.19
testis, neonate N10.CNhs11204.763-44D913.63
testis, neonate N20.CNhs11110.839-18H311.11
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I421.08
thymus, embryo E15.CNhs11005.430-45I219.72
thymus, embryo E16.CNhs11002.456-26C517.41
thymus, embryo E17.CNhs10581.478-18C113.96
thymus, embryo E18.CNhs10595.1273-19G415.30
thymus, neonate N02.CNhs11181.1541-43F813.94
thymus, neonate N03.CNhs11137.2104-43C715.51
thymus, neonate N06.CNhs11197.681-26C414.24
thymus, neonate N07.CNhs11211.713-19D315.01
thymus, neonate N10.CNhs11194.748-24E415.02
thymus, neonate N20.CNhs11186.820-7A213.84
thymus, neonate N25.CNhs11125.1362-25G714.24
thymus, neonate N30.CNhs11132.1393-42G218.47
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F529.47
uterus, adult.CNhs10509.92-27E516.48
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I813.91
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H220.32
whole body, embryo E14.5.CNhs10578.420-27D216.29
whole body, embryo E14.CNhs10519.395-14B122.43
whole body, embryo E16.CNhs10514.453-14F226.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.58
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.80
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.25
whole body, embryo E17.5.CNhs10513.490-9F921.61
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B321.52
whole body, neonate N00.CNhs10525.657-19C227.29
whole body, neonate N01.CNhs10576.659-23C621.62
whole body, neonate N06.CNhs10515.692-21D121.84
whole body, neonate N10.CNhs10518.761-6B426.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum6.28e-1023
sac6.28e-1023
gastrointestinal system8.12e-1047
intestine1.39e-0931
liver1.83e-0922
epithelial sac1.83e-0922
digestive gland1.83e-0922
epithelium of foregut-midgut junction1.83e-0922
anatomical boundary1.83e-0922
hepatobiliary system1.83e-0922
foregut-midgut junction1.83e-0922
hepatic diverticulum1.83e-0922
liver primordium1.83e-0922
septum transversum1.83e-0922
liver bud1.83e-0922
exocrine gland6.14e-0925
exocrine system6.14e-0925
abdomen element6.49e-0749
abdominal segment element6.49e-0749
abdominal segment of trunk6.49e-0749
abdomen6.49e-0749
mucosa6.58e-0715







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