FFCP PHASE1:Mm9::chr4:47221152..47221164,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12819|HGNC=|MCL_coexpression_id=1463|UniProt=A2AJY2,O35206|association_with_transcript=119bp_to_ENSMUST00000082303,ENSMUST00000102917_5end|description=CAGE_peak_3_at_Col15a1_5end|id=chr4:47221152..47221164,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.49e-08!26;UBERON:0000990!1.49e-08!26;UBERON:0003133!4.10e-08!24;UBERON:0000468!1.61e-07!333;UBERON:0000991!5.42e-07!18;UBERON:0005564!5.42e-07!18;UBERON:0004176!7.03e-07!17;UBERON:0009196!7.03e-07!17;UBERON:0009117!7.03e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.70e-09,26;UBERON:0000990,1.70e-09,26;UBERON:0003133,5.58e-09,24;UBERON:0000991,3.32e-08,18;UBERON:0005564,3.32e-08,18;UBERON:0004176,4.45e-08,17;UBERON:0009196,4.45e-08,17;UBERON:0009117,4.45e-08,17;UBERON:0002323,9.64e-07,37;UBERON:0004458,9.64e-07,37|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,0,0,0,0,0,0,0,0,0,0,2.31533492432352,2.0057340795713,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.420649922702764,2.57085885963423,6.84692476950002,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,3.53554302568401,3.27454865837937,0.745597783301202,0.151452386666368,1.88928900266964,0,0.860423876981386,0,0,0,0,1.54488862144927,0.681721290312231,0.259786004602869,0.70667914902068,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,1.04091196059682,1.21786191324856,1.38369298353635,0.452167921657868,3.05730638552832,2.89033160058254,1.73036477414062,2.89198713839823,0,6.63244084784378,4.85851340612866,2.42437626567611,0,0,0.41889341362691,0.510914110417183,0,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,9.67473956578005,3.98102305952298,0.505445516867349,1.47309299120532,0.520481771850815,0.229902104433473,0.540186389416048,1.80845781402858,1.08858398642125,0.768682321709099,1.68663104207512,3.10444044886819,0.215567992932842,1.32374256117473,1.05570674498369,1.97276159184817,1.11218899690239,3.48252166522167,4.93877127379064,1.99034266818493,0,0,0,0,0,0.36012412292203,0.946978942340841,0.983821158737019,1.54267112887378,1.62773761325285,4.29237442239391,3.73649095574942,4.60767579757745,10.342550236983,9.80932595504854,10.5263990946239,13.173006917463,5.50246316917524,0.420579897128254,0.205809224758569,0,0.264450566663544,1.06644125267617,0.232236671860439,0.902072229254653,1.61346819698674,1.33426826306922,1.71203063501303,3.32170343081158,1.15289268306808,1.25667604400135,3.38226002469956,1.75467678407208,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,3.31320686568214,1.1270773567308,4.48032921259691,4.26695471768777,4.9095073923223,7.58838445491087,1.62371162777562,1.72698600625512,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0.482443521363367,0,0.37898282354097,1.95557971730431,2.20668611507745,3.75504397261603,1.67506257441816,1.90434912708811,0.390267295715598,0.788175720530955,1.99318220683897,1.75400245523236,1.47476983244164,1.38147985492716,0.433947175744535,0,0,2.45882136509518,4.96686143348518,0.321101179975584,0.234423373184406,0,6.5642441073137,0.94652465824877,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0,0,6.81312408999689,12.4645922567079,10.4247653986289,6.43383479592888,0,0.971122544619926,0.604647113929502,1.32023555829129,1.77181135728464,3.99665692327106,1.55056975900933,2.54473610634254,4.27796854061666,5.68866164284469,3.16255825724996,6.18813259489121,0.340439605753788,0.720244376125241,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,2.11204537257339,0.21183207086382,1.10264199027481,3.13283880588812,2.42196640043858,7.47880269109133,8.11731939221328,7.2221995887827,2.62332752966866,0,0,1.44470807574256,0.925972636848558,0,0,0.228778173206523,0,0,0.138199973804424,3.81868247206045,0,1.62655573701479,2.70013352054503,6.48173717644853,4.36725127492355,3.9110660451598,3.71940550764012,5.49687478166462,1.42576470620972,1.86401793926078,0,2.39226473670366,4.46737924234164,4.27792614356905,6.45799117388655,4.39285926276023,5.63314745499619,4.55715346953825,1.67774951081137,2.41584120826006,2.30424005006292,0.632022241256357,1.82452693761148,1.33524244314275,1.03936658382236,0.537080087002444,0.993406773906324,0.961563596159751,1.03382669022204,1.21159739937777,1.295515713135,0.604957110821043,0.877120926657772,0.481059208201647,0.350630706544707,1.13365191807606,0,0,0,3.86379188064381,21.9588496277883,13.7363718200449,7.07415650960917,3.00943262421218,0,0,0,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| ||
|EntrezGene=12819 | |||
|HGNC= | |||
|MCL_coexpression_id=1463 | |||
|UniProt=A2AJY2,O35206 | |||
|association_with_transcript=119bp_to_ENSMUST00000082303,ENSMUST00000102917_5end | |||
|description=CAGE_peak_3_at_Col15a1_5end | |||
|id=chr4:47221152..47221164,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.49e-08!26;UBERON:0000990!1.49e-08!26;UBERON:0003133!4.10e-08!24;UBERON:0000468!1.61e-07!333;UBERON:0000991!5.42e-07!18;UBERON:0005564!5.42e-07!18;UBERON:0004176!7.03e-07!17;UBERON:0009196!7.03e-07!17;UBERON:0009117!7.03e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.70e-09,26;UBERON:0000990,1.70e-09,26;UBERON:0003133,5.58e-09,24;UBERON:0000991,3.32e-08,18;UBERON:0005564,3.32e-08,18;UBERON:0004176,4.45e-08,17;UBERON:0009196,4.45e-08,17;UBERON:0009117,4.45e-08,17;UBERON:0002323,9.64e-07,37;UBERON:0004458,9.64e-07,37 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,0,0,0,0,0,0,0,0,0,0,2.31533492432352,2.0057340795713,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.420649922702764,2.57085885963423,6.84692476950002,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,3.53554302568401,3.27454865837937,0.745597783301202,0.151452386666368,1.88928900266964,0,0.860423876981386,0,0,0,0,1.54488862144927,0.681721290312231,0.259786004602869,0.70667914902068,2.53518155598025,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,1.04091196059682,1.21786191324856,1.38369298353635,0.452167921657868,3.05730638552832,2.89033160058254,1.73036477414062,2.89198713839823,0,6.63244084784378,4.85851340612866,2.42437626567611,0,0,0.41889341362691,0.510914110417183,0,0,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,9.67473956578005,3.98102305952298,0.505445516867349,1.47309299120532,0.520481771850815,0.229902104433473,0.540186389416048,1.80845781402858,1.08858398642125,0.768682321709099,1.68663104207512,3.10444044886819,0.215567992932842,1.32374256117473,1.05570674498369,1.97276159184817,1.11218899690239,3.48252166522167,4.93877127379064,1.99034266818493,0,0,0,0,0,0.36012412292203,0.946978942340841,0.983821158737019,1.54267112887378,1.62773761325285,4.29237442239391,3.73649095574942,4.60767579757745,10.342550236983,9.80932595504854,10.5263990946239,13.173006917463,5.50246316917524,0.420579897128254,0.205809224758569,0,0.264450566663544,1.06644125267617,0.232236671860439,0.902072229254653,1.61346819698674,1.33426826306922,1.71203063501303,3.32170343081158,1.15289268306808,1.25667604400135,3.38226002469956,1.75467678407208,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,3.31320686568214,1.1270773567308,4.48032921259691,4.26695471768777,4.9095073923223,7.58838445491087,1.62371162777562,1.72698600625512,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,0,1.24815069245824,0.252578877947112,0.717589654087649,0.482443521363367,0,0.37898282354097,1.95557971730431,2.20668611507745,3.75504397261603,1.67506257441816,1.90434912708811,0.390267295715598,0.788175720530955,1.99318220683897,1.75400245523236,1.47476983244164,1.38147985492716,0.433947175744535,0,0,2.45882136509518,4.96686143348518,0.321101179975584,0.234423373184406,0,6.5642441073137,0.94652465824877,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0,0,6.81312408999689,12.4645922567079,10.4247653986289,6.43383479592888,0,0.971122544619926,0.604647113929502,1.32023555829129,1.77181135728464,3.99665692327106,1.55056975900933,2.54473610634254,4.27796854061666,5.68866164284469,3.16255825724996,6.18813259489121,0.340439605753788,0.720244376125241,0.388076051348264,0.857348140126369,0.709360934569094,0.891844088010353,0.493647061806363,0.913394847343798,2.11204537257339,0.21183207086382,1.10264199027481,3.13283880588812,2.42196640043858,7.47880269109133,8.11731939221328,7.2221995887827,2.62332752966866,0,0,1.44470807574256,0.925972636848558,0,0,0.228778173206523,0,0,0.138199973804424,3.81868247206045,0,1.62655573701479,2.70013352054503,6.48173717644853,4.36725127492355,3.9110660451598,3.71940550764012,5.49687478166462,1.42576470620972,1.86401793926078,0,2.39226473670366,4.46737924234164,4.27792614356905,6.45799117388655,4.39285926276023,5.63314745499619,4.55715346953825,1.67774951081137,2.41584120826006,2.30424005006292,0.632022241256357,1.82452693761148,1.33524244314275,1.03936658382236,0.537080087002444,0.993406773906324,0.961563596159751,1.03382669022204,1.21159739937777,1.295515713135,0.604957110821043,0.877120926657772,0.481059208201647,0.350630706544707,1.13365191807606,0,0,0,3.86379188064381,21.9588496277883,13.7363718200449,7.07415650960917,3.00943262421218,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,3.8897074730927,0.419226325255965,0.919217542250071,4.22268782823069,3.7086310303001,4.1719497246936,2.52697211763797,4.81610669791456,3.39527414494937,3.83930180626518,3.07320731543373,2.35485422718014,1.90517476513229,3.24476112645595,3.27945674788299,3.29668720642645,3.97437084362873,5.48590803816665,3.90446773550542,1.90748951957857,3.34296758254356,3.48204707536723,3.63842813934209,3.10977553883713,3.94604567156764,3.53090695999241,3.92799590160417,2.84724043498018,3.34915240076916,4.09231043169689,3.40861050609125,3.08650577569826,2.49810577937946,3.27504251823572,4.29742108096597,5.54736162999646,10.5883881177367,12.5208631235028 | |||
|short_description=p3@Col15a1 | |||
}} |
Revision as of 05:08, 14 September 2013
Short description: | p3@Col15a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Col15a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1463 |
Association with transcript: | 119bp_to_ENSMUST00000082303, ENSMUST00000102917_5end |
EntrezGene: | Col15a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.70e-09 | 26 |
reproductive system | 1.70e-09 | 26 |
reproductive organ | 5.58e-09 | 24 |
gonad | 3.32e-08 | 18 |
gonad primordium | 3.32e-08 | 18 |
external genitalia | 4.45e-08 | 17 |
indifferent external genitalia | 4.45e-08 | 17 |
indifferent gonad | 4.45e-08 | 17 |
body cavity | 9.64e-07 | 37 |
body cavity or lining | 9.64e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.