FFCP PHASE1:Mm9::chr4:96220308..96220355,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13110|HGNC=|MCL_coexpression_id=3488|UniProt=O54750,Q8CC91|association_with_transcript=0bp_to_ENSMUST00000030303,NM_010008,uc008tti.2_5end|description=CAGE_peak_2_at_Cyp2j6_5end|id=chr4:96220308..96220355,-|ontology_enrichment_celltype=CL:0000066!8.88e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,7.30e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.35e-12!43;UBERON:0005409!4.59e-11!59;UBERON:0000344!7.31e-08!15;UBERON:0000010!3.46e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.81e-15,31;UBERON:0005409,5.46e-12,47;UBERON:0000344,6.81e-08,15;UBERON:0011216,1.02e-07,194;UBERON:0000010,3.25e-07,11;UBERON:0001242,9.79e-07,13;UBERON:0001262,9.79e-07,13;UBERON:0004786,9.79e-07,13|phase1_expression=20.6592012765184,41.528073509084,45.9549231783431,37.2030979907401,53.0949473743128,13.766100296775,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0.893618560807968,0,47.997726838022,48.1759490241057,50.5324128421218,50.3991535506118,43.7406602352355,46.5557377668116,39.3167002425492,17.5167103417691,0,0,0,9.82095507154334,13.4650062740379,7.9626048942324,0,0,0,0,0,0,4.15459499319405,2.93993100536592,3.30384153891027,1.56478268869608,3.2703773457067,2.19686182734472,4.47188767870852,3.07970127575798,1.43752564364972,0,0,0,1.02903774414379,4.29800159908135,5.15672092277442,1.21389876515759,2.11596391708813,2.53532561402472,0,0.889294796111139,0,0,1.4209602298922,7.49000276296012,3.84218305321555,0.829516898467821,1.08004750665353,0.841299845405528,9.14083150092171,12.1477697523387,1.71487118900936,1.0543001812006,0,16.5173821499083,15.7055425844781,16.5895055916743,1.31886287730194,1.82975287204819,3.12548022334056,10.8881369610539,12.380777420697,15.4326230254578,14.7314292736834,14.2371680799103,3.16879057903011,22.5664056132888,92.1973033302783,12.1743085254705,15.487629785665,15.6393406752783,26.9851595818909,27.9403859502498,36.7382047419815,13.2017754923847,1.70430322578058,3.89679006904303,4.59341446863442,80.7032795320379,2.56652954828636,7.64415719119937,0,3.24736561516821,4.81383744402687,3.53867111510348,23.6360631018454,1.55362730188303,4.45326417194474,4.3371331691534,3.04465478312141,2.53677046981664,4.22023393547343,3.64524992120685,3.14166478324189,0,6.36237170447611,0.884610551949874,3.88240439873782,1.76673214768315,0.969750506270444,55.9175283654366,2.92780797011547,3.35114730901528,35.7639877292028,0.958520996047362,1.79970819298022,1.01656181658452,17.8250860891739,15.5550204958333,4.02093926761166,10.081810571152,10.7400492078739,18.2853479212413,19.6311928311987,3.97173519016234,2.86136032403214,9.85618757891331,51.9791384039591,3.25301107406759,3.44853156650209,3.42118046630164,5.57607825992146,7.75616090325138,11.5302348256365,11.5253121208466,17.5918292102531,2.15567992932842,2.64748512234947,4.57472922826267,4.3839146485515,3.61461423993277,1.74126083261083,5.96768195583036,2.18937693500343,1.40442637462647,0.51469581422943,0.852490498186778,1.44988040774851,3.51789089971644,1.62055855314913,1.65721314909647,1.37734962223183,1.3884040159864,1.16266972375204,1.07309360559848,1.63471479314037,1.97471819896177,3.2833492815819,3.64809642956351,3.21639972335731,3.29325172936576,3.62357330653004,6.51898840548794,2.88132914661996,58.814543371116,51.5678604993911,4.90562976231038,5.10920678092965,8.24751752461397,29.0424275457613,41.139938111301,44.893247762564,69.7557720470432,63.5737965234682,34.9355940232375,39.9902508802713,34.5086434200843,77.2984691442631,74.7837652566442,104.549168458543,2.27601481143698,3.31320686568214,11.270773567308,4.48032921259691,9.69762435838129,5.6810014111158,9.16929788301731,14.0229640580622,13.5018905943582,9.62497878590044,19.862326014839,1.16791574001266,0.786235980452812,1.79889689907883,0.811440485554012,0.964708639009667,1.52775511068852,4.31544206176216,3.72911021582581,4.3929826110093,10.0637744569148,9.30352369171258,13.4176199439261,16.6702059445094,27.9859965094183,23.639732546805,3.8798169934987,4.16881105895066,1.95557971730431,2.71592137240301,1.87752198630802,2.68010011906905,3.33261097240419,1.36593553500459,3.15270288212382,3.76489972402917,3.6674596791222,2.94953966488328,3.10832967358612,2.02508682014116,0,0,2.45882136509518,3.03530420935206,20.7110261084252,19.1055049145291,2.29508923527346,2.7771801992481,22.085575359138,25.3785183792815,38.3453647964382,47.0768531966527,67.5079982469654,61.4276071811766,31.5752347306418,29.2255857911312,34.3900366813475,19.6006003017302,3.26462195979018,3.20518086601059,1.46598263418218,5.27904393512113,3.98235415019888,1.94224508923985,3.32555912661226,5.65815239267694,6.20133975049623,6.14870295887855,14.4719844174204,5.45300594216258,4.9909632973861,3.47640433729398,7.37930260024991,2.06271086496374,13.9580238359053,3.6012218806262,3.88076051348264,4.50107773566344,7.44828981297549,6.59964625127661,8.22745103010605,6.39376393140658,0.469343416127421,0,5.51320995137405,6.43056386471772,3.87514624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| ||
|EntrezGene=13110 | |||
|HGNC= | |||
|MCL_coexpression_id=3488 | |||
|UniProt=O54750,Q8CC91 | |||
|association_with_transcript=0bp_to_ENSMUST00000030303,NM_010008,uc008tti.2_5end | |||
|description=CAGE_peak_2_at_Cyp2j6_5end | |||
|id=chr4:96220308..96220355,- | |||
|ontology_enrichment_celltype=CL:0000066!8.88e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.30e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.35e-12!43;UBERON:0005409!4.59e-11!59;UBERON:0000344!7.31e-08!15;UBERON:0000010!3.46e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.81e-15,31;UBERON:0005409,5.46e-12,47;UBERON:0000344,6.81e-08,15;UBERON:0011216,1.02e-07,194;UBERON:0000010,3.25e-07,11;UBERON:0001242,9.79e-07,13;UBERON:0001262,9.79e-07,13;UBERON:0004786,9.79e-07,13 | |||
|phase1_expression=20.6592012765184,41.528073509084,45.9549231783431,37.2030979907401,53.0949473743128,13.766100296775,14.2503710763271,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0.893618560807968,0,47.997726838022,48.1759490241057,50.5324128421218,50.3991535506118,43.7406602352355,46.5557377668116,39.3167002425492,17.5167103417691,0,0,0,9.82095507154334,13.4650062740379,7.9626048942324,0,0,0,0,0,0,4.15459499319405,2.93993100536592,3.30384153891027,1.56478268869608,3.2703773457067,2.19686182734472,4.47188767870852,3.07970127575798,1.43752564364972,0,0,0,1.02903774414379,4.29800159908135,5.15672092277442,1.21389876515759,2.11596391708813,2.53532561402472,0,0.889294796111139,0,0,1.4209602298922,7.49000276296012,3.84218305321555,0.829516898467821,1.08004750665353,0.841299845405528,9.14083150092171,12.1477697523387,1.71487118900936,1.0543001812006,0,16.5173821499083,15.7055425844781,16.5895055916743,1.31886287730194,1.82975287204819,3.12548022334056,10.8881369610539,12.380777420697,15.4326230254578,14.7314292736834,14.2371680799103,3.16879057903011,22.5664056132888,92.1973033302783,12.1743085254705,15.487629785665,15.6393406752783,26.9851595818909,27.9403859502498,36.7382047419815,13.2017754923847,1.70430322578058,3.89679006904303,4.59341446863442,80.7032795320379,2.56652954828636,7.64415719119937,0,3.24736561516821,4.81383744402687,3.53867111510348,23.6360631018454,1.55362730188303,4.45326417194474,4.3371331691534,3.04465478312141,2.53677046981664,4.22023393547343,3.64524992120685,3.14166478324189,0,6.36237170447611,0.884610551949874,3.88240439873782,1.76673214768315,0.969750506270444,55.9175283654366,2.92780797011547,3.35114730901528,35.7639877292028,0.958520996047362,1.79970819298022,1.01656181658452,17.8250860891739,15.5550204958333,4.02093926761166,10.081810571152,10.7400492078739,18.2853479212413,19.6311928311987,3.97173519016234,2.86136032403214,9.85618757891331,51.9791384039591,3.25301107406759,3.44853156650209,3.42118046630164,5.57607825992146,7.75616090325138,11.5302348256365,11.5253121208466,17.5918292102531,2.15567992932842,2.64748512234947,4.57472922826267,4.3839146485515,3.61461423993277,1.74126083261083,5.96768195583036,2.18937693500343,1.40442637462647,0.51469581422943,0.852490498186778,1.44988040774851,3.51789089971644,1.62055855314913,1.65721314909647,1.37734962223183,1.3884040159864,1.16266972375204,1.07309360559848,1.63471479314037,1.97471819896177,3.2833492815819,3.64809642956351,3.21639972335731,3.29325172936576,3.62357330653004,6.51898840548794,2.88132914661996,58.814543371116,51.5678604993911,4.90562976231038,5.10920678092965,8.24751752461397,29.0424275457613,41.139938111301,44.893247762564,69.7557720470432,63.5737965234682,34.9355940232375,39.9902508802713,34.5086434200843,77.2984691442631,74.7837652566442,104.549168458543,2.27601481143698,3.31320686568214,11.270773567308,4.48032921259691,9.69762435838129,5.6810014111158,9.16929788301731,14.0229640580622,13.5018905943582,9.62497878590044,19.862326014839,1.16791574001266,0.786235980452812,1.79889689907883,0.811440485554012,0.964708639009667,1.52775511068852,4.31544206176216,3.72911021582581,4.3929826110093,10.0637744569148,9.30352369171258,13.4176199439261,16.6702059445094,27.9859965094183,23.639732546805,3.8798169934987,4.16881105895066,1.95557971730431,2.71592137240301,1.87752198630802,2.68010011906905,3.33261097240419,1.36593553500459,3.15270288212382,3.76489972402917,3.6674596791222,2.94953966488328,3.10832967358612,2.02508682014116,0,0,2.45882136509518,3.03530420935206,20.7110261084252,19.1055049145291,2.29508923527346,2.7771801992481,22.085575359138,25.3785183792815,38.3453647964382,47.0768531966527,67.5079982469654,61.4276071811766,31.5752347306418,29.2255857911312,34.3900366813475,19.6006003017302,3.26462195979018,3.20518086601059,1.46598263418218,5.27904393512113,3.98235415019888,1.94224508923985,3.32555912661226,5.65815239267694,6.20133975049623,6.14870295887855,14.4719844174204,5.45300594216258,4.9909632973861,3.47640433729398,7.37930260024991,2.06271086496374,13.9580238359053,3.6012218806262,3.88076051348264,4.50107773566344,7.44828981297549,6.59964625127661,8.22745103010605,6.39376393140658,0.469343416127421,0,5.51320995137405,6.43056386471772,3.87514624070173,3.61877549568935,3.9392873521035,3.77524069413641,66.457630751606,23.1781627513137,0.683483523191411,2.27025554759545,1.85194527369712,0.941842285023455,0.136694227721025,0.686334519619568,9.00885678967433,6.85762116385924,4.28419918793714,24.821436068393,5.21954389408873,7.31950081656655,7.56037385752609,7.10900206449194,10.0446779323242,9.03591120778299,13.0592460046031,27.7461298503071,32.1445133763646,8.69875038321696,0,2.24274819065968,2.97825282822776,1.75006069509643,2.71235629303235,2.53434188236167,2.34714477291508,2.3436789271911,2.20204623293993,0,0,1.26404448251271,2.02725215290164,0.924398614483445,0.51968329191118,1.43221356533985,0.39736270956253,0.841368146639782,0.886137163047463,0.403865799792591,0.457240839929999,0.100826185136841,0.194915761479505,0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| |||
|short_description=p2@Cyp2j6 | |||
}} | |||
Revision as of 05:38, 14 September 2013
| Short description: | p2@Cyp2j6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cyp2j6_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3488 |
| Association with transcript: | 0bp_to_ENSMUST00000030303, NM_010008, uc008tti.2_5end |
| EntrezGene: | Cyp2j6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 7.30e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 2.81e-15 | 31 |
| gastrointestinal system | 5.46e-12 | 47 |
| mucosa | 6.81e-08 | 15 |
| organ system subdivision | 1.02e-07 | 194 |
| peripheral nervous system | 3.25e-07 | 11 |
| intestinal mucosa | 9.79e-07 | 13 |
| wall of intestine | 9.79e-07 | 13 |
| gastrointestinal system mucosa | 9.79e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
