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UBERON:0011216

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Name:organ system subdivision
Namespace:FANTOM
Definition:"Anatomical structure, which consists of a specific set of the members of (predominantly) one organ or organ part subclass interconnected by zones of continuity or body substances; is demarcated from other subdivisions of the same organ system by one or more zones of continuity or anatomical lines; together with other subdivisions of the same organ system, it constitutes an organ system. Examples: rib cage, facial skeleton, portal system, central nervous system, upper respiratory tract, muscle group of back." [FMA:67509]
Xrefs:
links:

FBbt:00007330

FMA:67509

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000477(anatomical cluster)
part_of:UBERON:0000467(anatomical system)



Children

is a:UBERON:0000010 (peripheral nervous system),UBERON:0000011 (parasympathetic nervous system),UBERON:0000012 (somatic nervous system),UBERON:0000075 (subdivision of skeletal system),UBERON:0001017 (central nervous system),UBERON:0002199 (integument),UBERON:0002410 (autonomic nervous system),UBERON:0010912 (subdivision of skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011216 (organ system subdivision), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data