FFCP PHASE1:Mm9::chr5:125873365..125873385,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:125873365..125873385,-|id=chr5:125873365..125873385,-|ontology_enrichment_celltype=CL:0000066!4.94e-10!25;CL:0002563!5.40e-09!9;CL:0002251!5.40e-09!9;CL:0000223!2.38e-08!20;CL:0000063!8.11e-08!66;CL:0002076!1.76e-07!15|ontology_enrichment_celltype_v019_2=CL:0000223,1.85e-10,20;CL:0000066,3.30e-10,25;CL:0002563,5.06e-10,9;CL:0002251,5.06e-10,9;CL:0000034,1.75e-07,97;CL:0000182,6.62e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!5.40e-09!9;UBERON:0004808!5.40e-09!9;UBERON:0001277!5.40e-09!9;UBERON:0000485!5.83e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.06e-10,9;UBERON:0004808,5.06e-10,9;UBERON:0001277,5.06e-10,9;UBERON:0000485,3.74e-08,11;UBERON:0001242,7.41e-07,13;UBERON:0001262,7.41e-07,13;UBERON:0004786,7.41e-07,13|phase1_expression=0.160148847104794,2.09385244583617,0.909998478779072,2.41971369045464,4.50806156951712,0.671517087647559,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0.397163804803541,0,0,0,1.14846392823004,0.86152399231815,0.861884930743556,0,0.252030129759931,0,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,1.25559489221072,1.5626706890476,0,41.176204162171,4.78131839470912,2.91306211818692,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0.573066879877513,0,0.202316460859598,0,0,0,0,2.2497492932035,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,37.6823835312181,0,1.3599426674155,1.07940638327563,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,2.15667224110656,1.79970819298022,2.79554499560742,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,2.1066395619397,2.31613116403244,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,2.54967644990783,3.35883485576779,2.76399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr5:125873365..125873385,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:125873365..125873385,- | |||
|id=chr5:125873365..125873385,- | |||
|ontology_enrichment_celltype=CL:0000066!4.94e-10!25;CL:0002563!5.40e-09!9;CL:0002251!5.40e-09!9;CL:0000223!2.38e-08!20;CL:0000063!8.11e-08!66;CL:0002076!1.76e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.85e-10,20;CL:0000066,3.30e-10,25;CL:0002563,5.06e-10,9;CL:0002251,5.06e-10,9;CL:0000034,1.75e-07,97;CL:0000182,6.62e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.40e-09!9;UBERON:0004808!5.40e-09!9;UBERON:0001277!5.40e-09!9;UBERON:0000485!5.83e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.06e-10,9;UBERON:0004808,5.06e-10,9;UBERON:0001277,5.06e-10,9;UBERON:0000485,3.74e-08,11;UBERON:0001242,7.41e-07,13;UBERON:0001262,7.41e-07,13;UBERON:0004786,7.41e-07,13 | |||
|phase1_expression=0.160148847104794,2.09385244583617,0.909998478779072,2.41971369045464,4.50806156951712,0.671517087647559,0.934450562382103,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,0.17008658030214,0.397163804803541,0,0,0,1.14846392823004,0.86152399231815,0.861884930743556,0,0.252030129759931,0,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,1.25559489221072,1.5626706890476,0,41.176204162171,4.78131839470912,2.91306211818692,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0,0.573066879877513,0,0.202316460859598,0,0,0,0,2.2497492932035,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,37.6823835312181,0,1.3599426674155,1.07940638327563,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,2.15667224110656,1.79970819298022,2.79554499560742,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,2.1066395619397,2.31613116403244,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0.780877488593277,0,0,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0.21183207086382,0,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,2.54967644990783,3.35883485576779,2.76399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr5:125873365..125873385,- | |||
}} |
Revision as of 06:30, 14 September 2013
Short description: | p@chr5:125873365..125873385, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:125873365..125873385, - |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.85e-10 | 20 |
epithelial cell | 3.30e-10 | 25 |
intestinal epithelial cell | 5.06e-10 | 9 |
epithelial cell of alimentary canal | 5.06e-10 | 9 |
stem cell | 1.75e-07 | 97 |
hepatocyte | 6.62e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.06e-10 | 9 |
gastrointestinal system epithelium | 5.06e-10 | 9 |
intestinal epithelium | 5.06e-10 | 9 |
simple columnar epithelium | 3.74e-08 | 11 |
intestinal mucosa | 7.41e-07 | 13 |
wall of intestine | 7.41e-07 | 13 |
gastrointestinal system mucosa | 7.41e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.