FFCP PHASE1:Mm9::chr5:136533218..136533232,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69665|HGNC=|UniProt=F8WJ60,Q9D701,D3YZ16|association_with_transcript=81bp_to_ENSMUST00000006303,NM_027158,uc008zzr.2,uc008zzs.1_5end|description=CAGE_peak_3_at_2310043J07Rik_5end|id=chr5:136533218..136533232,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.20e-08,3;CL:0002202,4.20e-08,3;CL:0000069,4.20e-08,3;CL:0002632,4.20e-08,3;CL:0002368,4.20e-08,3;CL:0000307,4.20e-08,3;CL:0000377,4.20e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.99e-09!9;UBERON:0000019!1.99e-09!9;UBERON:0000047!1.99e-09!9;UBERON:0004088!1.99e-09!9;UBERON:0002104!1.99e-09!9;UBERON:0001456!1.99e-09!9;UBERON:0003072!1.99e-09!9;UBERON:0003071!1.99e-09!9;UBERON:0004128!1.99e-09!9;UBERON:0001444!1.47e-08!11;UBERON:0000020!1.53e-07!12;UBERON:0001032!1.53e-07!12;UBERON:0004456!1.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.74e-21,9;UBERON:0000019,1.74e-21,9;UBERON:0000047,1.74e-21,9;UBERON:0010312,1.74e-21,9;UBERON:0004088,1.74e-21,9;UBERON:0002104,1.74e-21,9;UBERON:0001456,1.74e-21,9;UBERON:0003072,1.74e-21,9;UBERON:0004128,1.74e-21,9;UBERON:0003071,1.74e-21,9;UBERON:0001444,2.95e-17,11;UBERON:0000020,1.14e-15,12;UBERON:0001032,1.14e-15,12;UBERON:0004456,1.14e-15,12;UBERON:0000033,2.49e-14,13;UBERON:0005085,2.49e-14,13;UBERON:0003126,4.20e-08,3;UBERON:0001005,4.20e-08,3;UBERON:0007196,4.20e-08,3;UBERON:0001558,4.20e-08,3|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,2.53359865475099,2.02209778005913,0,0,0,0,0,2.07553947530453,0.301445281105245,0,0.251333182659351,7.16865406429684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,7.36546495602659,1.43132487258974,1.60931473103431,3.24111833649629,3.76762044589288,3.26575195926374,2.8185018462667,1.87403449119458,9.31332134660456,0,0.378212160335639,0,0.876782929710299,1.94633074457919,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0.444756087689741,0,0,0,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0,0.472905432318573,0.8858587585951,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,1.08036656418786,0.388076051348264,0.428674070063185,0,0,0.164549020602121,0,0,1.69465656691056,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0,0.82554747185289,0,0,0,0,0,0,0,0,0.158167996790568,5.28630614529807,9.82848601478391,9.19988502463662,5.24070152990826,2.96701562046606,1.23980183588004,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,1.21635129174099,0.616265742988964,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,0.93841237725591,2.19781949120718,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,2.18796045361465,0.628839487883947,0.735374033800057,0.666740183404846,0.206035057238894,1.28367683836726,1.01078884705519,2.28131369901216,0.754505365544305,1.49826411951812,0.640251524048693,0.516919220600519,1.42888107384922,0.927074607558844,0.77163688185482,1.64834360321323,0.883193520806384,1.71434626192708,0.354951612318675,0.953744759789284,0.145346416632329,0.941093804153306,0.761531471025089,0.365855945745545,1.31534855718921,0.407412341537585,1.68342681497322,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,1.92906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0.231867835620421|short_description=p3@2310043J07Rik}} | ||
|EntrezGene=69665 | |||
|HGNC= | |||
|UniProt=F8WJ60,Q9D701,D3YZ16 | |||
|association_with_transcript=81bp_to_ENSMUST00000006303,NM_027158,uc008zzr.2,uc008zzs.1_5end | |||
|description=CAGE_peak_3_at_2310043J07Rik_5end | |||
|id=chr5:136533218..136533232,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.20e-08,3;CL:0002202,4.20e-08,3;CL:0000069,4.20e-08,3;CL:0002632,4.20e-08,3;CL:0002368,4.20e-08,3;CL:0000307,4.20e-08,3;CL:0000377,4.20e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.99e-09!9;UBERON:0000019!1.99e-09!9;UBERON:0000047!1.99e-09!9;UBERON:0004088!1.99e-09!9;UBERON:0002104!1.99e-09!9;UBERON:0001456!1.99e-09!9;UBERON:0003072!1.99e-09!9;UBERON:0003071!1.99e-09!9;UBERON:0004128!1.99e-09!9;UBERON:0001444!1.47e-08!11;UBERON:0000020!1.53e-07!12;UBERON:0001032!1.53e-07!12;UBERON:0004456!1.53e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.74e-21,9;UBERON:0000019,1.74e-21,9;UBERON:0000047,1.74e-21,9;UBERON:0010312,1.74e-21,9;UBERON:0004088,1.74e-21,9;UBERON:0002104,1.74e-21,9;UBERON:0001456,1.74e-21,9;UBERON:0003072,1.74e-21,9;UBERON:0004128,1.74e-21,9;UBERON:0003071,1.74e-21,9;UBERON:0001444,2.95e-17,11;UBERON:0000020,1.14e-15,12;UBERON:0001032,1.14e-15,12;UBERON:0004456,1.14e-15,12;UBERON:0000033,2.49e-14,13;UBERON:0005085,2.49e-14,13;UBERON:0003126,4.20e-08,3;UBERON:0001005,4.20e-08,3;UBERON:0007196,4.20e-08,3;UBERON:0001558,4.20e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59789249213457,2.53359865475099,2.02209778005913,0,0,0,0,0,2.07553947530453,0.301445281105245,0,0.251333182659351,7.16865406429684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,7.36546495602659,1.43132487258974,1.60931473103431,3.24111833649629,3.76762044589288,3.26575195926374,2.8185018462667,1.87403449119458,9.31332134660456,0,0.378212160335639,0,0.876782929710299,1.94633074457919,1.74126083261083,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0.444756087689741,0,0,0,0,0,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0.189709611372772,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.238043640886014,0,0.472905432318573,0.8858587585951,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890328018336276,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,1.08036656418786,0.388076051348264,0.428674070063185,0,0,0.164549020602121,0,0,1.69465656691056,0,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0,0.82554747185289,0,0,0,0,0,0,0,0,0.158167996790568,5.28630614529807,9.82848601478391,9.19988502463662,5.24070152990826,2.96701562046606,1.23980183588004,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,1.21635129174099,0.616265742988964,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.772758376128762,0.93841237725591,2.19781949120718,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,2.18796045361465,0.628839487883947,0.735374033800057,0.666740183404846,0.206035057238894,1.28367683836726,1.01078884705519,2.28131369901216,0.754505365544305,1.49826411951812,0.640251524048693,0.516919220600519,1.42888107384922,0.927074607558844,0.77163688185482,1.64834360321323,0.883193520806384,1.71434626192708,0.354951612318675,0.953744759789284,0.145346416632329,0.941093804153306,0.761531471025089,0.365855945745545,1.31534855718921,0.407412341537585,1.68342681497322,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,1.92906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p3@2310043J07Rik | |||
}} |
Revision as of 06:41, 14 September 2013
Short description: | p3@2310043J07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_2310043J07Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENSMUST00000006303, NM_027158, uc008zzr.2, uc008zzs.1_5end |
EntrezGene: | 2310043J07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.20e-08 | 3 |
epithelial cell of tracheobronchial tree | 4.20e-08 | 3 |
branched duct epithelial cell | 4.20e-08 | 3 |
epithelial cell of lower respiratory tract | 4.20e-08 | 3 |
respiratory epithelial cell | 4.20e-08 | 3 |
tracheal epithelial cell | 4.20e-08 | 3 |
tracheoblast | 4.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 1.74e-21 | 9 |
camera-type eye | 1.74e-21 | 9 |
simple eye | 1.74e-21 | 9 |
immature eye | 1.74e-21 | 9 |
ocular region | 1.74e-21 | 9 |
visual system | 1.74e-21 | 9 |
face | 1.74e-21 | 9 |
optic cup | 1.74e-21 | 9 |
optic vesicle | 1.74e-21 | 9 |
eye primordium | 1.74e-21 | 9 |
subdivision of head | 2.95e-17 | 11 |
sense organ | 1.14e-15 | 12 |
sensory system | 1.14e-15 | 12 |
entire sense organ system | 1.14e-15 | 12 |
head | 2.49e-14 | 13 |
ectodermal placode | 2.49e-14 | 13 |
trachea | 4.20e-08 | 3 |
respiratory airway | 4.20e-08 | 3 |
tracheobronchial tree | 4.20e-08 | 3 |
lower respiratory tract | 4.20e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.