FFCP PHASE1:Mm9::chr5:137463454..137463512,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=26433|HGNC=|MCL_coexpression_id=1234|UniProt=|association_with_transcript=108bp_to_ENSMUST00000144784_5end|description=CAGE_peak_1_at_Plod3_5end|id=chr5:137463454..137463512,+|ontology_enrichment_celltype=CL:0000333!1.40e-07!10;CL:0000095!1.40e-07!10;CL:0000243!1.40e-07!10;CL:0000123!1.40e-07!10;CL:0000125!1.40e-07!10;CL:0000030!1.40e-07!10;CL:0000339!1.40e-07!10|ontology_enrichment_celltype_v019_2=CL:0000333,1.40e-07,10;CL:0000095,1.40e-07,10;CL:0000243,1.40e-07,10;CL:0000123,1.40e-07,10;CL:0000125,1.40e-07,10;CL:0000030,1.40e-07,10;CL:0000339,1.40e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!3.76e-07!32;UBERON:0002329!7.12e-07!11;UBERON:0003077!7.12e-07!11;UBERON:0003059!7.12e-07!11;UBERON:0007282!7.12e-07!11;UBERON:0009618!7.12e-07!11;UBERON:0007285!7.12e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.76e-07,32;UBERON:0007524,7.12e-07,11;UBERON:0003077,7.12e-07,11;UBERON:0007285,7.12e-07,11|phase1_expression=21.6200943591472,15.0059425284925,16.3799726180233,9.67885476181856,11.520601788766,19.1382369979554,18.6890112476421,3.22808308603941,0.985521055061667,1.40438715793196,2.22583358693156,3.66951931378547,0.513602189793617,1.31130603628496,5.3297561890506,4.25198061518635,1.39912375625629,3.62781490161973,2.33094537129756,4.2438965179803,12.5013636522073,3.07801948722744,2.87319768052829,14.7193028969934,18.3527424853736,21.8208146363708,18.0920038386811,20.0388246397877,11.7814520062952,9.32511480111744,27.9380443425684,6.98533740805594,11.0711661765223,0,10.9763615505484,9.47537478543406,8.5751129630195,38.5049100277955,37.5040965371424,39.7878045420087,43.5291301142951,44.397956522299,41.7538903606792,25.5570540490422,29.3993100536592,34.6903361585578,93.1045699774167,36.8462514282955,74.9129883124549,72.9112121528563,54.3147315906407,58.9385513896383,0.671130424230945,0.725362142011344,1.34437519656986,62.5140429567351,74.212160944138,56.7239301505187,3.64169629547276,1.05798195854407,3.1691570175309,87.7607338059052,112.051144310004,155.232701231041,151.296553472747,184.01434977104,100.066436913147,59.9380556301625,4.14758449233911,4.59020190327748,4.6271491497304,9.99778445413313,9.05561017901615,3.42974237801871,3.1629005436018,3.67687514644008,5.50579404996943,4.97980618532232,5.68344173048101,3.03338461779446,2.74462930807229,1.56274011167028,5.58365998002762,6.19038871034848,7.02871939773326,11.490514833473,7.54569908235246,4.65998614563251,98.746956106472,129.907511823564,17.3918693221007,21.5105969245347,13.599426674155,18.8896117073236,24.6915038630114,20.6092368064774,12.7804422319894,36.8129496768605,38.9679006904303,37.1006553235857,37.1826628210436,52.6138557398703,56.0571527354621,42.6640021891999,12.7729714196616,17.2284708523067,12.1325866803548,11.0758363327488,4.91981978929626,11.7269289861212,19.7773272513395,14.6143429589828,16.3737003051802,14.770818774157,9.99504010653491,15.3313241422204,30.1577860635936,17.2073234734695,18.5768215909474,19.4120219936891,13.0296495891632,16.4857586065976,7.45567044872489,4.68449275218475,3.56059401582874,8.43008282188352,10.6635460810269,20.3966928537759,18.1710424714483,5.84183493678809,8.6925114535539,6.03140890141749,4.51943232499919,6.13717097592793,7.2725815595846,6.65189178577806,24.5432866879262,17.2925689148029,8.08712826987759,7.99679052368601,6.11566081924707,9.19608417733892,8.10279584124071,9.0422890701429,7.8241974024027,6.27757229395764,7.68354141389776,3.88055056108524,4.95806383745537,12.4810012910761,17.4191612922309,34.1945342587017,19.7413546950174,26.1189124891625,23.8707278233214,15.5246728118425,31.5995934290956,37.058098624519,40.9195439129653,10.9776659443816,10.3191466391682,14.5850269783422,14.4414288706978,11.6090896730968,11.2614992407786,11.39416329277,11.8040296615832,10.2753501283109,9.70903114489535,8.20837320395476,8.59329381186071,11.5497990066013,12.0752563410078,14.4942932261202,5.67782861123144,5.55684906848136,6.93879444265976,17.7181879664575,8.74481827194459,14.3986736553472,11.4692040576663,14.3195302482573,14.6769508937614,15.5985013412299,17.5575752771469,14.822905925161,9.0480675168097,7.56034593756373,9.94316844307513,14.3811105384675,9.29393614461185,7.76650965692032,9.293727146701,11.3106027483632,9.01661885384643,11.8117770150282,15.3222464862424,9.25792822552205,12.5840708877272,12.6944727262458,11.7749045881031,11.9695249004147,22.2339470315362,9.51017102581736,5.89676985339609,8.09503604585473,10.9544465549792,6.99413763282009,11.7127891819453,18.1248566594011,6.48540907100142,9.60964946158285,8.62609239164127,8.93138274404408,10.6092808858951,9.34541848404313,16.1457672169721,13.9908621195376,23.0941487708256,9.09558776498327,13.6890580211302,12.0519010900384,9.38760993154008,15.2430694272052,19.9956658344252,22.0501022079313,12.1379060961767,11.7376285513851,15.9454768657487,16.877921415721,18.9953480052485,20.3955172599931,84.4431190059925,137.608138006134,38.8493775685039,29.5252318546064,4.49541651965817,6.32943107597897,36.885362709752,12.6235463602186,14.5133780931478,9.37052986311932,10.1248996934415,17.6836910484888,20.7202766896627,23.7784285862619,15.7876173653209,15.7818163272108,12.2539211163422,3.85585579706168,13.4843080947855,32.0518086601059,18.7320003256613,19.3015043877867,17.2568679841952,14.0812768969889,12.3952658355548,11.6935149448657,21.2617362874156,18.7535440245796,12.9214146584111,9.45187696641514,11.4079161083111,9.48110273807448,16.8669773719998,17.5330423521918,5.44703369206061,7.38250485528372,9.44318391614108,8.3591443662321,10.8177542521787,21.0475204770443,20.0749805134588,18.8768268451052,25.8138878870081,54.6526742828656,7.49796553386871,10.8824926941377,15.6620493895028,15.4401087816079,14.0859365923701,10.1767357841938,6.70405924248657,6.11903496634682,10.5939946094669,29.719708986704,18.7046472643409,5.65105371014073,3.96413260390973,3.88922894451088,4.41943917984024,4.75834937900437,7.04819866402561,14.3200592702267,7.59206384594725,13.6224042974989,14.4727156701214,12.3362094648537,14.6302917709939,17.6672293764115,9.4224939526883,13.3495530411855,9.59150802359267,9.32008969630389,1.12738587736838,9.27002585472668,11.0857188606255,13.4171319957393,16.790777052105,17.2335248000594,12.3225100578042,8.85389816938861,5.34782656571125,3.14059357073808,2.30424005006292,2.21207784439725,12.5689633479902,8.01145465885653,4.15746633528944,4.29664069601955,3.17890167650024,2.76449533895928,1.77227432609493,2.1202954489111,1.5241361331,2.31900225814733,1.26695244961678,1.34696578296461,0.935015217452552,7.48210265930198,8.43546622821446,8.25367480807176,15.9490385545875,13.7164611762855,43.1669693537719,17.7657075539247,16.291996810009,10.0314420807073,3.95326289831947,5.06357760157895,6.87474616127276,7.38968684077857,2.74033007908257,3.0215755895588,2.70009000092722,3.60256962579376,5.43770890781046,5.1776031175182,1.3492355185943,13.5668456956351,13.6586884603307,16.531256760644,3.98265008993166,7.16989682955055,14.2237905793034,10.7138229764225,12.8367683836726,9.6024940470243,12.1670063947315,12.0720858487089,13.7653015980727,14.1495586814761,11.1999164463446,16.1939855036245,16.1079213063349,15.4327376370964,14.0109206273124,10.1567254892734,12.343293085875,12.2458306249943,11.6833733074187,13.5172167468066,13.6458601602229,13.6229518705599,12.2561741824758,14.994973551957,14.2594319538155,14.5896990631012,14.9480122836459,14.1846454620811,12.2769312950907,9.76102099471586,18.9048478761519,21.4837097026634,20.5859815431959,14.6112316752843,18.5549682106778,17.2061306913222,9.7384490960577|short_description=p1@Plod3}} | ||
|EntrezGene=26433 | |||
|HGNC= | |||
|MCL_coexpression_id=1234 | |||
|UniProt= | |||
|association_with_transcript=108bp_to_ENSMUST00000144784_5end | |||
|description=CAGE_peak_1_at_Plod3_5end | |||
|id=chr5:137463454..137463512,+ | |||
|ontology_enrichment_celltype=CL:0000333!1.40e-07!10;CL:0000095!1.40e-07!10;CL:0000243!1.40e-07!10;CL:0000123!1.40e-07!10;CL:0000125!1.40e-07!10;CL:0000030!1.40e-07!10;CL:0000339!1.40e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.40e-07,10;CL:0000095,1.40e-07,10;CL:0000243,1.40e-07,10;CL:0000123,1.40e-07,10;CL:0000125,1.40e-07,10;CL:0000030,1.40e-07,10;CL:0000339,1.40e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.76e-07!32;UBERON:0002329!7.12e-07!11;UBERON:0003077!7.12e-07!11;UBERON:0003059!7.12e-07!11;UBERON:0007282!7.12e-07!11;UBERON:0009618!7.12e-07!11;UBERON:0007285!7.12e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.76e-07,32;UBERON:0007524,7.12e-07,11;UBERON:0003077,7.12e-07,11;UBERON:0007285,7.12e-07,11 | |||
|phase1_expression=21.6200943591472,15.0059425284925,16.3799726180233,9.67885476181856,11.520601788766,19.1382369979554,18.6890112476421,3.22808308603941,0.985521055061667,1.40438715793196,2.22583358693156,3.66951931378547,0.513602189793617,1.31130603628496,5.3297561890506,4.25198061518635,1.39912375625629,3.62781490161973,2.33094537129756,4.2438965179803,12.5013636522073,3.07801948722744,2.87319768052829,14.7193028969934,18.3527424853736,21.8208146363708,18.0920038386811,20.0388246397877,11.7814520062952,9.32511480111744,27.9380443425684,6.98533740805594,11.0711661765223,0,10.9763615505484,9.47537478543406,8.5751129630195,38.5049100277955,37.5040965371424,39.7878045420087,43.5291301142951,44.397956522299,41.7538903606792,25.5570540490422,29.3993100536592,34.6903361585578,93.1045699774167,36.8462514282955,74.9129883124549,72.9112121528563,54.3147315906407,58.9385513896383,0.671130424230945,0.725362142011344,1.34437519656986,62.5140429567351,74.212160944138,56.7239301505187,3.64169629547276,1.05798195854407,3.1691570175309,87.7607338059052,112.051144310004,155.232701231041,151.296553472747,184.01434977104,100.066436913147,59.9380556301625,4.14758449233911,4.59020190327748,4.6271491497304,9.99778445413313,9.05561017901615,3.42974237801871,3.1629005436018,3.67687514644008,5.50579404996943,4.97980618532232,5.68344173048101,3.03338461779446,2.74462930807229,1.56274011167028,5.58365998002762,6.19038871034848,7.02871939773326,11.490514833473,7.54569908235246,4.65998614563251,98.746956106472,129.907511823564,17.3918693221007,21.5105969245347,13.599426674155,18.8896117073236,24.6915038630114,20.6092368064774,12.7804422319894,36.8129496768605,38.9679006904303,37.1006553235857,37.1826628210436,52.6138557398703,56.0571527354621,42.6640021891999,12.7729714196616,17.2284708523067,12.1325866803548,11.0758363327488,4.91981978929626,11.7269289861212,19.7773272513395,14.6143429589828,16.3737003051802,14.770818774157,9.99504010653491,15.3313241422204,30.1577860635936,17.2073234734695,18.5768215909474,19.4120219936891,13.0296495891632,16.4857586065976,7.45567044872489,4.68449275218475,3.56059401582874,8.43008282188352,10.6635460810269,20.3966928537759,18.1710424714483,5.84183493678809,8.6925114535539,6.03140890141749,4.51943232499919,6.13717097592793,7.2725815595846,6.65189178577806,24.5432866879262,17.2925689148029,8.08712826987759,7.99679052368601,6.11566081924707,9.19608417733892,8.10279584124071,9.0422890701429,7.8241974024027,6.27757229395764,7.68354141389776,3.88055056108524,4.95806383745537,12.4810012910761,17.4191612922309,34.1945342587017,19.7413546950174,26.1189124891625,23.8707278233214,15.5246728118425,31.5995934290956,37.058098624519,40.9195439129653,10.9776659443816,10.3191466391682,14.5850269783422,14.4414288706978,11.6090896730968,11.2614992407786,11.39416329277,11.8040296615832,10.2753501283109,9.70903114489535,8.20837320395476,8.59329381186071,11.5497990066013,12.0752563410078,14.4942932261202,5.67782861123144,5.55684906848136,6.93879444265976,17.7181879664575,8.74481827194459,14.3986736553472,11.4692040576663,14.3195302482573,14.6769508937614,15.5985013412299,17.5575752771469,14.822905925161,9.0480675168097,7.56034593756373,9.94316844307513,14.3811105384675,9.29393614461185,7.76650965692032,9.293727146701,11.3106027483632,9.01661885384643,11.8117770150282,15.3222464862424,9.25792822552205,12.5840708877272,12.6944727262458,11.7749045881031,11.9695249004147,22.2339470315362,9.51017102581736,5.89676985339609,8.09503604585473,10.9544465549792,6.99413763282009,11.7127891819453,18.1248566594011,6.48540907100142,9.60964946158285,8.62609239164127,8.93138274404408,10.6092808858951,9.34541848404313,16.1457672169721,13.9908621195376,23.0941487708256,9.09558776498327,13.6890580211302,12.0519010900384,9.38760993154008,15.2430694272052,19.9956658344252,22.0501022079313,12.1379060961767,11.7376285513851,15.9454768657487,16.877921415721,18.9953480052485,20.3955172599931,84.4431190059925,137.608138006134,38.8493775685039,29.5252318546064,4.49541651965817,6.32943107597897,36.885362709752,12.6235463602186,14.5133780931478,9.37052986311932,10.1248996934415,17.6836910484888,20.7202766896627,23.7784285862619,15.7876173653209,15.7818163272108,12.2539211163422,3.85585579706168,13.4843080947855,32.0518086601059,18.7320003256613,19.3015043877867,17.2568679841952,14.0812768969889,12.3952658355548,11.6935149448657,21.2617362874156,18.7535440245796,12.9214146584111,9.45187696641514,11.4079161083111,9.48110273807448,16.8669773719998,17.5330423521918,5.44703369206061,7.38250485528372,9.44318391614108,8.3591443662321,10.8177542521787,21.0475204770443,20.0749805134588,18.8768268451052,25.8138878870081,54.6526742828656,7.49796553386871,10.8824926941377,15.6620493895028,15.4401087816079,14.0859365923701,10.1767357841938,6.70405924248657,6.11903496634682,10.5939946094669,29.719708986704,18.7046472643409,5.65105371014073,3.96413260390973,3.88922894451088,4.41943917984024,4.75834937900437,7.04819866402561,14.3200592702267,7.59206384594725,13.6224042974989,14.4727156701214,12.3362094648537,14.6302917709939,17.6672293764115,9.4224939526883,13.3495530411855,9.59150802359267,9.32008969630389,1.12738587736838,9.27002585472668,11.0857188606255,13.4171319957393,16.790777052105,17.2335248000594,12.3225100578042,8.85389816938861,5.34782656571125,3.14059357073808,2.30424005006292,2.21207784439725,12.5689633479902,8.01145465885653,4.15746633528944,4.29664069601955,3.17890167650024,2.76449533895928,1.77227432609493,2.1202954489111,1.5241361331,2.31900225814733,1.26695244961678,1.34696578296461,0.935015217452552,7.48210265930198,8.43546622821446,8.25367480807176,15.9490385545875,13.7164611762855,43.1669693537719,17.7657075539247,16.291996810009,10.0314420807073,3.95326289831947,5.06357760157895,6.87474616127276,7.38968684077857,2.74033007908257,3.0215755895588,2.70009000092722,3.60256962579376,5.43770890781046,5.1776031175182,1.3492355185943,13.5668456956351,13.6586884603307,16.531256760644,3.98265008993166,7.16989682955055,14.2237905793034,10.7138229764225,12.8367683836726,9.6024940470243,12.1670063947315,12.0720858487089,13.7653015980727,14.1495586814761,11.1999164463446,16.1939855036245,16.1079213063349,15.4327376370964,14.0109206273124,10.1567254892734,12.343293085875,12.2458306249943,11.6833733074187,13.5172167468066,13.6458601602229,13.6229518705599,12.2561741824758,14.994973551957,14.2594319538155,14.5896990631012,14.9480122836459,14.1846454620811,12.2769312950907,9.76102099471586,18.9048478761519,21.4837097026634,20.5859815431959,14.6112316752843,18.5549682106778,17.2061306913222,9.7384490960577 | |||
|short_description=p1@Plod3 | |||
}} |
Revision as of 06:43, 14 September 2013
Short description: | p1@Plod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Plod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1234 |
Association with transcript: | 108bp_to_ENSMUST00000144784_5end |
EntrezGene: | Plod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.40e-07 | 10 |
neuron associated cell | 1.40e-07 | 10 |
glial cell (sensu Vertebrata) | 1.40e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.40e-07 | 10 |
glial cell | 1.40e-07 | 10 |
glioblast | 1.40e-07 | 10 |
glioblast (sensu Vertebrata) | 1.40e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.76e-07 | 32 |
dense mesenchyme tissue | 7.12e-07 | 11 |
paraxial mesoderm | 7.12e-07 | 11 |
presumptive paraxial mesoderm | 7.12e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.