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UBERON:0007524

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Name:dense mesenchyme tissue
Namespace:FANTOM
Definition:"Mesenchyme with little extracellular matrix." [AEO:JB]
Xrefs:
links:

AEO:0000146

EHDAA2:0003146
Alt_id: EHDAA2:0003146

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003104(mesenchyme)



Children

is a:UBERON:0003077 (paraxial mesoderm),UBERON:0003081 (lateral plate mesoderm),UBERON:0005728 (extraembryonic mesoderm),UBERON:0005856 (developing mesenchymal condensation),UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0010046 (entire pharyngeal arch associated mesenchyme),UBERON:0010349 (otic capsule pre-cartilage condensation)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007524 (dense mesenchyme tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.34e-47FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_9ad587a0ecdf70216504a40cac499987p@chrX:160838683..160838694, +
1.34e-47FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_9ad587a0ecdf70216504a40cac499987p@chrX:160838683..160838694, +
4.66e-43FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_c4a324db047a1449c3bd02cc07b433a6p8@ARHGAP22
4.66e-43FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_c4a324db047a1449c3bd02cc07b433a6p8@ARHGAP22
5.06e-41FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_9dd075e170658a0868803c0cb69acb8ap@chrX:65748600..65748616, +
5.06e-41FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_9dd075e170658a0868803c0cb69acb8ap@chr12:105433069..105433075, -
5.06e-41FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_9dd075e170658a0868803c0cb69acb8ap@chrX:65748600..65748616, +
5.06e-41FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_9dd075e170658a0868803c0cb69acb8ap@chr12:105433069..105433075, -
6.64e-40FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_00f42557a07ea92897bb17c08675ec19p@chrX:160838787..160838800, +
6.64e-40FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_00f42557a07ea92897bb17c08675ec19p@chrX:160838787..160838800, +
1.53e-39FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_6d2b4c3a31826fc626877913702fbc42p@chr6:53359400..53359406, +
1.53e-39FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_6d2b4c3a31826fc626877913702fbc42p@chr6:53359400..53359406, +
3.42e-39FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_c67ba370979111da12e8eb665abe7b9ep@chr9:35685631..35685657, +
3.42e-39FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_c67ba370979111da12e8eb665abe7b9ep@chr9:35685631..35685657, +
2.46e-38FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_fec5f8d43843737bc8d83d10b6d0265bp2@SASH1
2.46e-38FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_fec5f8d43843737bc8d83d10b6d0265bp2@SASH1
5.1e-38FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_15db150f8e5ec797f3eb45832bad1442p4@ARHGAP22
5.1e-38FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_15db150f8e5ec797f3eb45832bad1442p4@ARHGAP22
6.65e-36FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_8c6eff17d4657d673d4cb7c5e6586d8dp@chr11:81849982..81850000, +
6.65e-36FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_8c6eff17d4657d673d4cb7c5e6586d8dp@chr11:81849982..81850000, +
3.33e-35FFCP PHASE1:Hg19::chr10:49813013..49813032,-#_a23f53d9db134657edf97b0bd61e0957p3@ARHGAP22
3.33e-35FFCP PHASE2:Hg19::chr10:49813013..49813032,-#_a23f53d9db134657edf97b0bd61e0957p3@ARHGAP22
2.15e-34FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_eb51496902aa8c9c8e4ebab8f592d779p@chr9:35685445..35685517, +
2.15e-34FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_eb51496902aa8c9c8e4ebab8f592d779p@chr9:35685445..35685517, +
3.86e-34FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_7c5aa72c10927979627e8c3e0e564f66p@chr9:35684475..35684520, +
3.86e-34FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_7c5aa72c10927979627e8c3e0e564f66p@chr9:35684475..35684520, +
7.09e-34FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_935c9a99c054f6500dc9111a8df0bc0ep2@RCN3
7.09e-34FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_935c9a99c054f6500dc9111a8df0bc0ep2@RCN3
9.25e-34FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_066496df34db4f6a5e51b0d67e2d747ep2@LRRC17
9.25e-34FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_066496df34db4f6a5e51b0d67e2d747ep2@LRRC17
1.81e-33FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_c83f1919ca895fb6a5841303ba0d0b71p@chr9:35689148..35689192, +
1.81e-33FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_c83f1919ca895fb6a5841303ba0d0b71p@chr9:35689148..35689192, +
1.81e-33FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_2697a2ff4c2a0829595d2af029f9b01cp@chr13:119579287..119579292, +
1.81e-33FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_2697a2ff4c2a0829595d2af029f9b01cp@chr13:119579287..119579292, +
2.11e-33FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_9e568b92eb6b5fd19c7f8cbb420e7f6ep@chr17:14813242..14813246, -
2.11e-33FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_9e568b92eb6b5fd19c7f8cbb420e7f6ep@chr17:14813242..14813246, -
3.09e-33FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_6db1e29340ee99d1583604a43db8b1afp1@LRRC17
3.09e-33FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_6db1e29340ee99d1583604a43db8b1afp1@LRRC17
1.1e-32FFCP PHASE2:Hg19::chr21:47518695..47518709,+#_f15c74e17c5db77e431b75219ef4464ep6@COL6A2
1.1e-32FFCP PHASE1:Hg19::chr21:47518695..47518709,+#_f15c74e17c5db77e431b75219ef4464ep6@COL6A2
1.19e-32FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_2de8f847defab5700152a0beaa36496bp3@IFI27L2
1.19e-32FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_2de8f847defab5700152a0beaa36496bp3@IFI27L2
3.07e-32FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840048..160840057, +
3.07e-32FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160823859..160823870, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840025..160840037, +
3.07e-32FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_0faad05eae83c8497f21ad02acbf65b4p@chrX:160840048..160840057, +
4.43e-32FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_f85c87ce78a61b4fc7dd96a7dd9f69a8p4@Gpr39
4.43e-32FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_f85c87ce78a61b4fc7dd96a7dd9f69a8p4@Gpr39
5.28e-32FFCP PHASE1:Hg19::chr21:47518637..47518688,+#_b3a46bbda8b3c9e31ee2fea9ebbbf6f2p2@COL6A2
5.28e-32FFCP PHASE2:Hg19::chr21:47518637..47518688,+#_b3a46bbda8b3c9e31ee2fea9ebbbf6f2p2@COL6A2
1.15e-31FFCP PHASE1:Hg19::chr9:35685273..35685313,+#_c79b976edd1dc837919bf78da88ce373p@chr9:35685273..35685313, +
1.15e-31FFCP PHASE2:Hg19::chr9:35685273..35685313,+#_c79b976edd1dc837919bf78da88ce373p@chr9:35685273..35685313, +
4.03e-31FFCP PHASE1:Hg19::chr2:33359687..33359717,+#_8096342cf3d4a20dc43be1c47de1bf45p2@LTBP1
4.03e-31FFCP PHASE2:Hg19::chr2:33359687..33359717,+#_8096342cf3d4a20dc43be1c47de1bf45p2@LTBP1
5.23e-31FFCP PHASE2:Hg19::chr12:53491743..53491754,+#_5d447f37402ebc38382c02fa6414a242p1@AK074416
5.23e-31FFCP PHASE1:Hg19::chr12:53491743..53491754,+#_5d447f37402ebc38382c02fa6414a242p1@AK074416
6.45e-31FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_a2ee0e47c08da261959cd13ddaf29593p@chr4:74703497..74703511, +
6.45e-31FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_a2ee0e47c08da261959cd13ddaf29593p@chr4:74703497..74703511, +
7.77e-31FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_9d7d958b3c6e92828e15bd0534d87fa0p@chr2:134548872..134548879, -
7.77e-31FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_9d7d958b3c6e92828e15bd0534d87fa0p@chr2:134548872..134548879, -
1.41e-30FFCP PHASE1:Hg19::chr21:47532318..47532355,+#_b5a1231cba3db8d581281e3fceb5befbp8@COL6A2
1.41e-30FFCP PHASE2:Hg19::chr21:47532318..47532355,+#_b5a1231cba3db8d581281e3fceb5befbp8@COL6A2
1.54e-30FFCP PHASE2:Hg19::chr7:100773764..100773799,-#_8ea3781d372f9384750ee3fb4211d1bfp@chr7:100773764..100773799, -
1.54e-30FFCP PHASE1:Hg19::chr7:100773764..100773799,-#_8ea3781d372f9384750ee3fb4211d1bfp@chr7:100773764..100773799, -
2.31e-30FFCP PHASE1:Hg19::chr21:47542827..47542859,-#_cc1a6479d1238b57dbc19b38d53aafc3p@chr21:47542827..47542859, -
2.31e-30FFCP PHASE2:Hg19::chr21:47542827..47542859,-#_cc1a6479d1238b57dbc19b38d53aafc3p@chr21:47542827..47542859, -
8.44e-30FFCP PHASE1:Hg19::chr21:47532107..47532192,+#_ee04c92a004f42f8692a8747708956f3p5@COL6A2
8.44e-30FFCP PHASE2:Hg19::chr21:47532107..47532192,+#_ee04c92a004f42f8692a8747708956f3p5@COL6A2
1.78e-29FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_0726b8c78d1c52d0728febd6702de5bcp1@CU675118
1.78e-29FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_0726b8c78d1c52d0728febd6702de5bcp1@CU675118
1.8e-29FFCP PHASE1:Hg19::chr9:35685692..35685745,-#_18704fd2d4ebec3721977951b5334ff2p2@TPM2
1.8e-29FFCP PHASE2:Hg19::chr9:35685692..35685745,-#_18704fd2d4ebec3721977951b5334ff2p2@TPM2
2.49e-29FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_e531e4bb2394ade96847117e059a64e1p2@ELTD1
2.49e-29FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_e531e4bb2394ade96847117e059a64e1p2@ELTD1
2.65e-29FFCP PHASE1:Hg19::chr4:86699834..86699889,+#_7fbc1ca77c7513d9652d4de8911cb00bp5@ARHGAP24
2.65e-29FFCP PHASE2:Hg19::chr4:86699834..86699889,+#_7fbc1ca77c7513d9652d4de8911cb00bp5@ARHGAP24
2.9e-29FFCP PHASE1:Hg19::chr21:47404327..47404375,-#_c4b171f35c3900f55849a46057346847p@chr21:47404327..47404375, -
2.9e-29FFCP PHASE2:Hg19::chr21:47404327..47404375,-#_c4b171f35c3900f55849a46057346847p@chr21:47404327..47404375, -
4.51e-29FFCP PHASE1:Hg19::chrX:38033461..38033496,-#_d48b9999190ff817211db4beab71ba94p@chrX:38033461..38033496, -
4.51e-29FFCP PHASE2:Hg19::chrX:38033461..38033496,-#_d48b9999190ff817211db4beab71ba94p@chrX:38033461..38033496, -
5.36e-29FFCP PHASE1:Hg19::chr21:47532365..47532492,-#_9871b7717721812018d88d7bc7f9af2fp@chr21:47532365..47532492, -
5.36e-29FFCP PHASE2:Hg19::chr21:47532365..47532492,-#_9871b7717721812018d88d7bc7f9af2fp@chr21:47532365..47532492, -
6.49e-29FFCP PHASE2:Hg19::chr2:33359579..33359590,+#_8afc2068e28449b22c7f8b12e10f5055p4@LTBP1
6.49e-29FFCP PHASE1:Hg19::chr2:33359579..33359590,+#_8afc2068e28449b22c7f8b12e10f5055p4@LTBP1
6.94e-29FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_4d6ac45ea7e1211abc22ba792c53ae79p@chr11:102661517..102661541, -
6.94e-29FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_4d6ac45ea7e1211abc22ba792c53ae79p@chr11:102661517..102661541, -
7.21e-29FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_5ee8d1a8ec61505383c9fa8e14bf5a6ap@chr1:127574253..127574264, +
7.21e-29FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_5ee8d1a8ec61505383c9fa8e14bf5a6ap@chr1:127574253..127574264, +
7.95e-29FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_3ceadef33d54626d144f981e40a58c03p11@Fam198b
7.95e-29FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_3ceadef33d54626d144f981e40a58c03p11@Fam198b
8.06e-29FFCP PHASE1:Hg19::chr7:100773872..100773904,-#_6d4ad10b60b753602b1000f79a269424p@chr7:100773872..100773904, -
8.06e-29FFCP PHASE2:Hg19::chr7:100773872..100773904,-#_6d4ad10b60b753602b1000f79a269424p@chr7:100773872..100773904, -
8.95e-29FFCP PHASE2:Hg19::chr12:53492630..53492661,+#_42e3d5899db5d90543e10abbe6aa2f6ep4@IGFBP6
8.95e-29FFCP PHASE1:Hg19::chr12:53492630..53492661,+#_42e3d5899db5d90543e10abbe6aa2f6ep4@IGFBP6
9.05e-29FFCP PHASE2:Hg19::chr7:99686632..99686645,+#_41702c905abe8c173e8d8123b14e6915p2@COPS6
9.05e-29FFCP PHASE1:Hg19::chr7:99686632..99686645,+#_41702c905abe8c173e8d8123b14e6915p2@COPS6
9.39e-29FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_bcb3504b8cbd924347e50259ffdbfaefp7@Gpr39
9.39e-29FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_bcb3504b8cbd924347e50259ffdbfaefp7@Gpr39