FFCP PHASE1:Mm9::chr5:90927321..90927338,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=246|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:90927321..90927338,-|id=chr5:90927321..90927338,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.49e-08!22;UBERON:0007499!1.49e-08!22;UBERON:0006925!1.49e-08!22;UBERON:0009497!1.49e-08!22;UBERON:0000015!1.49e-08!22;UBERON:0002423!1.49e-08!22;UBERON:0006235!1.49e-08!22;UBERON:0008835!1.49e-08!22;UBERON:0003894!1.49e-08!22;UBERON:0004161!1.49e-08!22;UBERON:0008836!1.49e-08!22;UBERON:0009854!4.86e-08!23;UBERON:0009856!4.86e-08!23;UBERON:0002365!3.85e-07!25;UBERON:0002330!3.85e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.38e-20,22;UBERON:0007499,1.38e-20,22;UBERON:0006925,1.38e-20,22;UBERON:0009497,1.38e-20,22;UBERON:0000015,1.38e-20,22;UBERON:0002423,1.38e-20,22;UBERON:0006235,1.38e-20,22;UBERON:0008835,1.38e-20,22;UBERON:0003894,1.38e-20,22;UBERON:0004161,1.38e-20,22;UBERON:0008836,1.38e-20,22;UBERON:0009854,1.25e-19,23;UBERON:0009856,1.25e-19,23;UBERON:0002365,6.05e-18,25;UBERON:0002330,6.05e-18,25;UBERON:0005256,2.78e-11,45;UBERON:0005172,3.20e-10,49;UBERON:0005173,3.20e-10,49;UBERON:0002417,3.20e-10,49;UBERON:0000916,3.20e-10,49;UBERON:0003914,7.55e-09,47;UBERON:0002368,4.95e-08,60;UBERON:0003104,7.16e-08,61;UBERON:0009142,7.16e-08,61;UBERON:0005631,1.64e-07,3;UBERON:0000478,1.64e-07,3;UBERON:0000158,1.64e-07,3;UBERON:0003929,2.43e-07,55;UBERON:0002530,2.79e-07,65;UBERON:0009569,3.82e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.117588707135705,0,22.2475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0.333690211432188,1.57247196090562,1.57403478669398,1.62288097110802,5.06472035480075,7.12952384987975,8.0554918486227,3.56697498905078,4.3929826110093,14.3768206527355,3.72140947668503,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,0.972426868273176,0,0,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.749132059759059,0.768301828858431,0.34461281373368,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.581385666529314,0.470546902076653,1.26921911837515,0.365855945745545,1.57841826862706,0.679020569229309,0.561142271657738,0.237270036248348,0.985044823755635,0,0.77468420592983,0.771626443924566,0,0.935726433781634,0.859484216193193,0,0,0|short_description=p@chr5:90927321..90927338,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=246 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:90927321..90927338,- | |||
|id=chr5:90927321..90927338,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.49e-08!22;UBERON:0007499!1.49e-08!22;UBERON:0006925!1.49e-08!22;UBERON:0009497!1.49e-08!22;UBERON:0000015!1.49e-08!22;UBERON:0002423!1.49e-08!22;UBERON:0006235!1.49e-08!22;UBERON:0008835!1.49e-08!22;UBERON:0003894!1.49e-08!22;UBERON:0004161!1.49e-08!22;UBERON:0008836!1.49e-08!22;UBERON:0009854!4.86e-08!23;UBERON:0009856!4.86e-08!23;UBERON:0002365!3.85e-07!25;UBERON:0002330!3.85e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.38e-20,22;UBERON:0007499,1.38e-20,22;UBERON:0006925,1.38e-20,22;UBERON:0009497,1.38e-20,22;UBERON:0000015,1.38e-20,22;UBERON:0002423,1.38e-20,22;UBERON:0006235,1.38e-20,22;UBERON:0008835,1.38e-20,22;UBERON:0003894,1.38e-20,22;UBERON:0004161,1.38e-20,22;UBERON:0008836,1.38e-20,22;UBERON:0009854,1.25e-19,23;UBERON:0009856,1.25e-19,23;UBERON:0002365,6.05e-18,25;UBERON:0002330,6.05e-18,25;UBERON:0005256,2.78e-11,45;UBERON:0005172,3.20e-10,49;UBERON:0005173,3.20e-10,49;UBERON:0002417,3.20e-10,49;UBERON:0000916,3.20e-10,49;UBERON:0003914,7.55e-09,47;UBERON:0002368,4.95e-08,60;UBERON:0003104,7.16e-08,61;UBERON:0009142,7.16e-08,61;UBERON:0005631,1.64e-07,3;UBERON:0000478,1.64e-07,3;UBERON:0000158,1.64e-07,3;UBERON:0003929,2.43e-07,55;UBERON:0002530,2.79e-07,65;UBERON:0009569,3.82e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.117588707135705,0,22.2475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0.333690211432188,1.57247196090562,1.57403478669398,1.62288097110802,5.06472035480075,7.12952384987975,8.0554918486227,3.56697498905078,4.3929826110093,14.3768206527355,3.72140947668503,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,0.972426868273176,0,0,1.11123363900808,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.749132059759059,0.768301828858431,0.34461281373368,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,1.1921809497366,0.581385666529314,0.470546902076653,1.26921911837515,0.365855945745545,1.57841826862706,0.679020569229309,0.561142271657738,0.237270036248348,0.985044823755635,0,0.77468420592983,0.771626443924566,0,0.935726433781634,0.859484216193193,0,0,0 | |||
|short_description=p@chr5:90927321..90927338,- | |||
}} |
Revision as of 08:17, 14 September 2013
Short description: | p@chr5:90927321..90927338, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:90927321..90927338, - |
Coexpression cluster: | MCL_coexpression_mm9:246 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.38e-20 | 22 |
epithelial sac | 1.38e-20 | 22 |
digestive gland | 1.38e-20 | 22 |
epithelium of foregut-midgut junction | 1.38e-20 | 22 |
anatomical boundary | 1.38e-20 | 22 |
hepatobiliary system | 1.38e-20 | 22 |
foregut-midgut junction | 1.38e-20 | 22 |
hepatic diverticulum | 1.38e-20 | 22 |
liver primordium | 1.38e-20 | 22 |
septum transversum | 1.38e-20 | 22 |
liver bud | 1.38e-20 | 22 |
digestive tract diverticulum | 1.25e-19 | 23 |
sac | 1.25e-19 | 23 |
exocrine gland | 6.05e-18 | 25 |
exocrine system | 6.05e-18 | 25 |
trunk mesenchyme | 2.78e-11 | 45 |
abdomen element | 3.20e-10 | 49 |
abdominal segment element | 3.20e-10 | 49 |
abdominal segment of trunk | 3.20e-10 | 49 |
abdomen | 3.20e-10 | 49 |
epithelial tube | 7.55e-09 | 47 |
endocrine gland | 4.95e-08 | 60 |
mesenchyme | 7.16e-08 | 61 |
entire embryonic mesenchyme | 7.16e-08 | 61 |
extraembryonic membrane | 1.64e-07 | 3 |
extraembryonic structure | 1.64e-07 | 3 |
membranous layer | 1.64e-07 | 3 |
gut epithelium | 2.43e-07 | 55 |
gland | 2.79e-07 | 65 |
subdivision of trunk | 3.82e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.