FFCP PHASE1:Mm9::chr6:100621120..100621172,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72171|HGNC=|UniProt=Q7TMX5|association_with_transcript=0bp_to_ENSMUST00000089245,ENSMUST00000113312,ENSMUST00000162776,ENSMUST00000170667,NM_181590,uc009dby.2,uc009dbz.2_5end|description=CAGE_peak_1_at_Shq1_5end|id=chr6:100621120..100621172,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.98e-12!79;UBERON:0000949!4.12e-10!72;UBERON:0001041!2.59e-09!92;UBERON:0000077!3.14e-09!97;UBERON:0003104!9.22e-09!131;UBERON:0009142!9.22e-09!131;UBERON:0000926!1.45e-08!193;UBERON:0004120!1.45e-08!193;UBERON:0006603!1.45e-08!193;UBERON:0002553!3.69e-08!39;UBERON:0000464!3.93e-08!57;UBERON:0009569!4.13e-08!66;UBERON:0005177!4.22e-08!85;UBERON:0004921!7.72e-08!126;UBERON:0004185!7.72e-08!126;UBERON:0002530!8.61e-08!65;UBERON:0003886!1.14e-07!38;UBERON:0002368!1.21e-07!60;UBERON:0005172!1.29e-07!49;UBERON:0005173!1.29e-07!49;UBERON:0002417!1.29e-07!49;UBERON:0000916!1.29e-07!49;UBERON:0001007!1.42e-07!128;UBERON:0001555!1.42e-07!128;UBERON:0007026!1.42e-07!128;UBERON:0002323!1.50e-07!37;UBERON:0004458!1.50e-07!37;UBERON:0001048!2.77e-07!147;UBERON:0004119!4.82e-07!130;UBERON:0000925!4.82e-07!130;UBERON:0006595!4.82e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-10,79;UBERON:0000949,4.01e-10,72;UBERON:0002553,3.69e-08,39;UBERON:0009569,4.13e-08,66;UBERON:0002530,8.41e-08,65;UBERON:0003886,1.14e-07,38;UBERON:0002368,1.19e-07,60;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0002323,1.50e-07,37;UBERON:0004458,1.50e-07,37;UBERON:0002100,1.85e-07,90;UBERON:0001041,5.91e-07,80|phase1_expression=5.92550734287738,2.79180326111489,0,1.20985684522732,0.500895729946347,10.9121526742728,6.54115393667472,5.55230290798778,8.4473233291,9.12851652655775,20.3749382188351,20.9800778157735,5.47842335779858,5.50748535239684,7.32841475994458,6.07425802169478,6.29605690315332,4.73193248037357,7.67840828192137,6.36584477697045,6.37824676133023,8.34043990087437,8.097193463307,5.43974237497583,5.50582274561208,4.01962374880514,3.87685796543167,5.817723282519,3.42042155021473,2.77233142735924,5.98672378769323,37.4668097341182,26.4477858661365,0,14.731432607315,10.805251948302,12.2501613757421,1.25559489221072,0,0,1.76469446409304,0.683045484958446,0.485510353031154,5.16176953699867,5.37297735463427,5.68994931701213,0.782391344348039,1.96222640742402,2.85592037554813,2.13872888981712,2.65974201088189,4.31257693094915,6.37573903019398,5.80289713609076,6.04968838456435,3.60163210450326,3.15186783932632,3.09403255366465,5.66486090406874,5.81890077199236,4.43681982454325,4.06613438482959,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,1.79760066311043,0.768436610643109,6.32506635081714,5.67024940993101,6.73039876324422,1.71390590642282,3.53389665522582,6.98197555525238,5.36734637702124,5.51531271966013,4.40463523997555,2.93680877595932,5.06901559745603,3.42904348098504,4.39140689291566,5.2091337055676,2.51264699101243,5.06486349028512,4.43114918552749,4.71405736757868,3.70166370077668,3.72798891650601,8.78423842664935,4.30757892608677,3.18850937571846,5.16254326188832,11.5595126730318,7.55584468292944,5.84798775702902,7.16843019355737,3.7919993435573,6.13549161281008,4.41636207824877,7.77347063922748,6.05626705039726,3.84979432242953,10.1922095882658,0,10.6080610095495,9.88103475352884,11.1215377903252,5.25245846707676,15.018397251536,7.12522267511159,10.235634279202,8.22056791442781,7.14908041493781,7.988299949289,7.17291113527799,6.03199638382442,6.17987419335935,4.916378135277,4.42305275974937,6.47067399789637,4.85851340612866,8.24287930329878,7.45567044872489,3.51336956413857,3.97948742945565,4.59822699375465,8.74650408893218,6.59893004092748,8.38663498682227,4.49371918214468,6.8625090422794,3.76963056338593,3.47648640384553,4.34716277461562,4.98691306942944,3.73154905055843,5.29564692021645,6.22034853050465,7.32895999457657,4.62972082950243,7.026503919986,9.65588838620586,7.20248519221397,6.0281927134286,8.16437989815934,6.79002717509704,8.71426038405478,5.17406741478031,7.32931175971664,7.18603104637713,8.09375171154165,6.79506770525482,8.06337022754234,7.3132954969655,5.76189981942242,11.3449532086541,13.3420505589515,9.26452465612975,12.5031939734061,5.79952163099405,5.62862543954631,7.02242039697958,4.49814997611899,5.50939848892731,3.85667782218446,5.8133486187602,5.633741429392,4.67061369468678,5.43047504714485,4.59668899421467,3.97237166774693,3.80119967305864,3.29325172936576,2.28150911892632,2.73376933133365,6.27718135513635,2.64335026387038,4.23120906661671,8.74481827194459,8.59275685883622,12.2424088255989,7.46229041106367,5.55945109612176,6.27744566171445,7.11793592316767,5.76446341534038,6.53471542880701,5.76973768919337,4.09424582950152,8.08937467788799,4.97117514711797,5.77509692437665,7.77638393907635,8.68288695833939,11.270773567308,9.36796108088446,6.20647958936402,7.85521182771568,6.260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| ||
|EntrezGene=72171 | |||
|HGNC= | |||
|UniProt=Q7TMX5 | |||
|association_with_transcript=0bp_to_ENSMUST00000089245,ENSMUST00000113312,ENSMUST00000162776,ENSMUST00000170667,NM_181590,uc009dby.2,uc009dbz.2_5end | |||
|description=CAGE_peak_1_at_Shq1_5end | |||
|id=chr6:100621120..100621172,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.98e-12!79;UBERON:0000949!4.12e-10!72;UBERON:0001041!2.59e-09!92;UBERON:0000077!3.14e-09!97;UBERON:0003104!9.22e-09!131;UBERON:0009142!9.22e-09!131;UBERON:0000926!1.45e-08!193;UBERON:0004120!1.45e-08!193;UBERON:0006603!1.45e-08!193;UBERON:0002553!3.69e-08!39;UBERON:0000464!3.93e-08!57;UBERON:0009569!4.13e-08!66;UBERON:0005177!4.22e-08!85;UBERON:0004921!7.72e-08!126;UBERON:0004185!7.72e-08!126;UBERON:0002530!8.61e-08!65;UBERON:0003886!1.14e-07!38;UBERON:0002368!1.21e-07!60;UBERON:0005172!1.29e-07!49;UBERON:0005173!1.29e-07!49;UBERON:0002417!1.29e-07!49;UBERON:0000916!1.29e-07!49;UBERON:0001007!1.42e-07!128;UBERON:0001555!1.42e-07!128;UBERON:0007026!1.42e-07!128;UBERON:0002323!1.50e-07!37;UBERON:0004458!1.50e-07!37;UBERON:0001048!2.77e-07!147;UBERON:0004119!4.82e-07!130;UBERON:0000925!4.82e-07!130;UBERON:0006595!4.82e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-10,79;UBERON:0000949,4.01e-10,72;UBERON:0002553,3.69e-08,39;UBERON:0009569,4.13e-08,66;UBERON:0002530,8.41e-08,65;UBERON:0003886,1.14e-07,38;UBERON:0002368,1.19e-07,60;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0002323,1.50e-07,37;UBERON:0004458,1.50e-07,37;UBERON:0002100,1.85e-07,90;UBERON:0001041,5.91e-07,80 | |||
|phase1_expression=5.92550734287738,2.79180326111489,0,1.20985684522732,0.500895729946347,10.9121526742728,6.54115393667472,5.55230290798778,8.4473233291,9.12851652655775,20.3749382188351,20.9800778157735,5.47842335779858,5.50748535239684,7.32841475994458,6.07425802169478,6.29605690315332,4.73193248037357,7.67840828192137,6.36584477697045,6.37824676133023,8.34043990087437,8.097193463307,5.43974237497583,5.50582274561208,4.01962374880514,3.87685796543167,5.817723282519,3.42042155021473,2.77233142735924,5.98672378769323,37.4668097341182,26.4477858661365,0,14.731432607315,10.805251948302,12.2501613757421,1.25559489221072,0,0,1.76469446409304,0.683045484958446,0.485510353031154,5.16176953699867,5.37297735463427,5.68994931701213,0.782391344348039,1.96222640742402,2.85592037554813,2.13872888981712,2.65974201088189,4.31257693094915,6.37573903019398,5.80289713609076,6.04968838456435,3.60163210450326,3.15186783932632,3.09403255366465,5.66486090406874,5.81890077199236,4.43681982454325,4.06613438482959,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,1.79760066311043,0.768436610643109,6.32506635081714,5.67024940993101,6.73039876324422,1.71390590642282,3.53389665522582,6.98197555525238,5.36734637702124,5.51531271966013,4.40463523997555,2.93680877595932,5.06901559745603,3.42904348098504,4.39140689291566,5.2091337055676,2.51264699101243,5.06486349028512,4.43114918552749,4.71405736757868,3.70166370077668,3.72798891650601,8.78423842664935,4.30757892608677,3.18850937571846,5.16254326188832,11.5595126730318,7.55584468292944,5.84798775702902,7.16843019355737,3.7919993435573,6.13549161281008,4.41636207824877,7.77347063922748,6.05626705039726,3.84979432242953,10.1922095882658,0,10.6080610095495,9.88103475352884,11.1215377903252,5.25245846707676,15.018397251536,7.12522267511159,10.235634279202,8.22056791442781,7.14908041493781,7.988299949289,7.17291113527799,6.03199638382442,6.17987419335935,4.916378135277,4.42305275974937,6.47067399789637,4.85851340612866,8.24287930329878,7.45567044872489,3.51336956413857,3.97948742945565,4.59822699375465,8.74650408893218,6.59893004092748,8.38663498682227,4.49371918214468,6.8625090422794,3.76963056338593,3.47648640384553,4.34716277461562,4.98691306942944,3.73154905055843,5.29564692021645,6.22034853050465,7.32895999457657,4.62972082950243,7.026503919986,9.65588838620586,7.20248519221397,6.0281927134286,8.16437989815934,6.79002717509704,8.71426038405478,5.17406741478031,7.32931175971664,7.18603104637713,8.09375171154165,6.79506770525482,8.06337022754234,7.3132954969655,5.76189981942242,11.3449532086541,13.3420505589515,9.26452465612975,12.5031939734061,5.79952163099405,5.62862543954631,7.02242039697958,4.49814997611899,5.50939848892731,3.85667782218446,5.8133486187602,5.633741429392,4.67061369468678,5.43047504714485,4.59668899421467,3.97237166774693,3.80119967305864,3.29325172936576,2.28150911892632,2.73376933133365,6.27718135513635,2.64335026387038,4.23120906661671,8.74481827194459,8.59275685883622,12.2424088255989,7.46229041106367,5.55945109612176,6.27744566171445,7.11793592316767,5.76446341534038,6.53471542880701,5.76973768919337,4.09424582950152,8.08937467788799,4.97117514711797,5.77509692437665,7.77638393907635,8.68288695833939,11.270773567308,9.36796108088446,6.20647958936402,7.85521182771568,6.26041717530147,4.13308414342886,6.27994911365499,7.89741849099523,10.3758419480502,13.8481437744358,10.8107447312262,10.1187950573184,7.70868461276311,9.88826354984909,9.16653066413111,9.20627639842594,9.40384315295205,6.86403532970204,17.2521847832825,6.32639611036456,4.99260276983297,11.1134706296729,6.63770430031075,10.1313139486307,7.39012760666419,9.09558776498327,10.4297584922897,6.95954851678271,8.68353918667458,8.04030035720716,5.95109102215034,4.68320754858717,5.04432461139811,3.76489972402917,5.74037167166954,5.89907932976657,6.04397436530635,4.05017364028232,4.52373851817817,2.71952841909355,1.96705709207614,4.96686143348518,3.69266356971921,3.7507739709505,6.06559297893699,1.76729649043061,6.94118082715765,5.46614242015294,6.24727853425117,6.93009514062401,7.79795359288379,1.98153571552183,6.47697122679831,4.67609372658099,4.34816555741176,4.4984984299053,8.80028528291265,8.72521457969551,5.86393053672874,6.43383479592888,3.98235415019888,9.71122544619926,9.97667737983678,8.11001842950362,6.79194353625777,7.68587869859819,10.0787034335606,7.99774204850512,11.7644134866958,7.26884543252377,7.37930260024991,9.28219889233682,12.2558258071364,9.72329907769075,6.98536892426874,7.50179622610573,6.7389288784064,8.20496560969525,7.73380396829969,5.17590413494819,4.69343416127421,3.60114520468494,10.1443063105282,8.40919890001548,5.48979050766079,7.17723806645055,7.04296829618505,6.72977688954751,2.91480836629851,5.00648315428376,9.05615668228619,7.22354037871279,7.40778109478847,8.09984365120171,6.83471138605126,6.86334519619568,3.73952545986482,4.3384950220334,5.38979897837253,2.86401185404534,7.43389584915668,9.14937602070819,9.82848601478391,6.48173717644853,4.80397640241591,5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| |||
|short_description=p1@Shq1 | |||
}} |
Revision as of 08:25, 14 September 2013
Short description: | p1@Shq1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Shq1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000089245, ENSMUST00000113312, ENSMUST00000162776, ENSMUST00000170667, NM_181590, uc009dby.2, uc009dbz.2_5end |
EntrezGene: | Shq1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.14e-10 | 79 |
endocrine system | 4.01e-10 | 72 |
anatomical cavity | 3.69e-08 | 39 |
subdivision of trunk | 4.13e-08 | 66 |
gland | 8.41e-08 | 65 |
body cavity precursor | 1.14e-07 | 38 |
endocrine gland | 1.19e-07 | 60 |
abdomen element | 1.29e-07 | 49 |
abdominal segment element | 1.29e-07 | 49 |
abdominal segment of trunk | 1.29e-07 | 49 |
abdomen | 1.29e-07 | 49 |
body cavity | 1.50e-07 | 37 |
body cavity or lining | 1.50e-07 | 37 |
trunk | 1.85e-07 | 90 |
foregut | 5.91e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.