FFCP PHASE1:Hg19::chr9:70971518..70971534,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5239|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8908|TSSclassifier=S|UniProt=E9PBS8,Q15124|association_with_transcript=-280bp_to_ENST00000377314,ENST00000396392,ENST00000396396,NM_021965,uc004agr.2_5end|coexpression_cluster_id=C48|description=CAGE_peak_1_at_PGM5_5end|id=chr9:70971518..70971534,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006603;1.17e-10;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.32e-43!115;UBERON:0003075!3.29e-11!86;UBERON:0007284!3.29e-11!86;UBERON:0002346!7.22e-11!90;UBERON:0000468!1.31e-09!659;UBERON:0005743!2.47e-09!86;UBERON:0001049!4.99e-09!57;UBERON:0005068!4.99e-09!57;UBERON:0006241!4.99e-09!57;UBERON:0007135!4.99e-09!57;UBERON:0000062!6.94e-09!511;UBERON:0000153!6.66e-08!129;UBERON:0007811!6.66e-08!129;UBERON:0000073!7.10e-08!94;UBERON:0001016!7.10e-08!94;UBERON:0000467!1.01e-07!625;UBERON:0000955!1.07e-07!69;UBERON:0006238!1.07e-07!69;UBERON:0000480!1.21e-07!626;UBERON:0002616!1.70e-07!59;UBERON:0001017!1.95e-07!82;UBERON:0000481!5.46e-07!347;UBERON:0001046!6.61e-07!19;UBERON:0000033!7.32e-07!123|ontology_enrichment_uberon_v019=UBERON:0004151;2.77e-08;3!UBERON:0003978;3.76e-08;3!UBERON:0000946;3.76e-08;3!UBERON:0000922;7.14e-08;49!UBERON:0006947;7.59e-08;3!UBERON:0004054;7.59e-08;3!UBERON:0007023;9.60e-08;114!UBERON:0004921;1.67e-07;33!UBERON:0000160;5.13e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.69e-31,114;UBERON:0004151,2.77e-08,3;UBERON:0003978,3.76e-08,3;UBERON:0009751,3.76e-08,3;UBERON:0000946,3.76e-08,3;UBERON:0002523,3.76e-08,3;UBERON:0005983,3.76e-08,3;UBERON:0002165,3.76e-08,3;UBERON:0002062,3.76e-08,3;UBERON:0007280,3.76e-08,3;UBERON:0006947,7.18e-08,3;UBERON:0004054,7.18e-08,3;UBERON:0000160,5.04e-07,17;UBERON:0004921,5.44e-07,118|phase1_expression=0.181678379270557,0,0.281908808191942,0,1.34088328328186,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,0,0,0.087834785693126,7.85874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,1.95249646038536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,2.95394953340702,0,0,1.02940686179115,0,0,0,0,0,0,0,0.695582429850461,0.469634776943287,3.3204282985047,2.77791307545966,8.56143685055692,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,1.71571711905428,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33385162651306,4.59220503979588,0.976135183992909,1.03041011647722,0,0,0,0,0,0,0,0.460511024178389,0.551346289938122,0,0.145016693914229,0.852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0.667852230137435,0,0,17.3345749778431,6.3545300572164,0,0,0,0,0,0,0,61.1589114948988,0,0,0.969332746095218,0.185536196323703,0,0.7812832832557,0,1.44999915086959,0,0,0,0,1.16641845353302,0,0,0.120596438625408,3.05163472634166,1.3269511191747,0.295547618953547,0.87754158861589,0.21787692703798,1.11538995422883,26.0861376327872,0,0,0,0.217294743844016,0.957003479195758,0.274792780205587,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.865554558968364,26.8720721391196,15.656988917091,25.6632660872123,0,0,0,0.404406797884062,20.8670188297685,0.234264445725339,0,0,0,30.7775834222525,8.46935012340647,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,8.91106008034354,0,0,0,0,23.7623090396628,0,5.19755703795225,0,0,0.316553979779393,0,0,7.68430781061669,0,0,0,1.20116498503375,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,27.3696753246809,26.5826091853553,10.0502223440754,19.9679000498991,29.6165973214234,42.62574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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8908 | |||
|TSSclassifier=S | |||
|UniProt=E9PBS8,Q15124 | |||
|association_with_transcript=-280bp_to_ENST00000377314,ENST00000396392,ENST00000396396,NM_021965,uc004agr.2_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_PGM5_5end | |||
|id=chr9:70971518..70971534,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.17e-10;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-43!115;UBERON:0003075!3.29e-11!86;UBERON:0007284!3.29e-11!86;UBERON:0002346!7.22e-11!90;UBERON:0000468!1.31e-09!659;UBERON:0005743!2.47e-09!86;UBERON:0001049!4.99e-09!57;UBERON:0005068!4.99e-09!57;UBERON:0006241!4.99e-09!57;UBERON:0007135!4.99e-09!57;UBERON:0000062!6.94e-09!511;UBERON:0000153!6.66e-08!129;UBERON:0007811!6.66e-08!129;UBERON:0000073!7.10e-08!94;UBERON:0001016!7.10e-08!94;UBERON:0000467!1.01e-07!625;UBERON:0000955!1.07e-07!69;UBERON:0006238!1.07e-07!69;UBERON:0000480!1.21e-07!626;UBERON:0002616!1.70e-07!59;UBERON:0001017!1.95e-07!82;UBERON:0000481!5.46e-07!347;UBERON:0001046!6.61e-07!19;UBERON:0000033!7.32e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.77e-08;3!UBERON:0003978;3.76e-08;3!UBERON:0000946;3.76e-08;3!UBERON:0000922;7.14e-08;49!UBERON:0006947;7.59e-08;3!UBERON:0004054;7.59e-08;3!UBERON:0007023;9.60e-08;114!UBERON:0004921;1.67e-07;33!UBERON:0000160;5.13e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.69e-31,114;UBERON:0004151,2.77e-08,3;UBERON:0003978,3.76e-08,3;UBERON:0009751,3.76e-08,3;UBERON:0000946,3.76e-08,3;UBERON:0002523,3.76e-08,3;UBERON:0005983,3.76e-08,3;UBERON:0002165,3.76e-08,3;UBERON:0002062,3.76e-08,3;UBERON:0007280,3.76e-08,3;UBERON:0006947,7.18e-08,3;UBERON:0004054,7.18e-08,3;UBERON:0000160,5.04e-07,17;UBERON:0004921,5.44e-07,118 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,1.34088328328186,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,0,0,0.087834785693126,7.85874452986276,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,1.52054421143703,1.95249646038536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,2.95394953340702,0,0,1.02940686179115,0,0,0,0,0,0,0,0.695582429850461,0.469634776943287,3.3204282985047,2.77791307545966,8.56143685055692,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,1.71571711905428,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33385162651306,4.59220503979588,0.976135183992909,1.03041011647722,0,0,0,0,0,0,0,0.460511024178389,0.551346289938122,0,0.145016693914229,0.852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0.667852230137435,0,0,17.3345749778431,6.3545300572164,0,0,0,0,0,0,0,61.1589114948988,0,0,0.969332746095218,0.185536196323703,0,0.7812832832557,0,1.44999915086959,0,0,0,0,1.16641845353302,0,0,0.120596438625408,3.05163472634166,1.3269511191747,0.295547618953547,0.87754158861589,0.21787692703798,1.11538995422883,26.0861376327872,0,0,0,0.217294743844016,0.957003479195758,0.274792780205587,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.865554558968364,26.8720721391196,15.656988917091,25.6632660872123,0,0,0,0.404406797884062,20.8670188297685,0.234264445725339,0,0,0,30.7775834222525,8.46935012340647,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,8.91106008034354,0,0,0,0,23.7623090396628,0,5.19755703795225,0,0,0.316553979779393,0,0,7.68430781061669,0,0,0,1.20116498503375,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,27.3696753246809,26.5826091853553,10.0502223440754,19.9679000498991,29.6165973214234,42.6257483713977,21.4987111957524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.788057072991982,2.15063811353492,0.105600336519406,0,0,40.7376336032819,37.0771503404642,0,0,0,0.326587360109409,0,0,0,0,1.02586563574658,2.65013777824443,0.258565912723101,0.13223260174269,0,0,1.70859860108311,4.08731193259131,1.24271716604159,3.96932817449561,0,0,0,1.08803560673895,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0.1251909307065,0.573409195690071,0.554645257684261,0.248385611765534,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0.850299680406731,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,8.42355677511681,0.20170506870352,0,0,0,0,0.405225507710368,0,0.206686796501184,0.317079050969534,0,1.64477330057155,18.3598136004039,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.455324382702595,0.975726071789027,0,0,0.271878931907327,0.328863867814245,0.354581522651905,4.3380246737907,32.1821680687107,0,0,19.1763331306994,0,0,2.85906176706625,0,0,0,4.81026818838152,0,0,0,0.860454717640555,0,0,6.77419280305486,0,0,0,0,0,0,12.9485767437579,7.18639647993729,17.397216470073,5.34282092365053,0,0,0,0,0,0,7.33154502025474,5.68254857310289,0,149.785624591636,0,0,0.594092800654172,3.3812458206672,0,0.563903507879121,0.902410431630081,0,0,0,0,8.76403665895821,2.2936464170227,0,0,0.339957450954573,0.436350690340377,3.7031878836078,0,5.54610754357702,0,0,0,13.5567396082238,0,0,0,0,5.30450887527676,0.535928260312357,0,0,2.77204176471275,5.71354635512977,0.0645889098360061,0.558672428662721,0,1.20929600728513,3.23387502333151,3.04803447055746,9.24029912930259,1.01028079521881,3.87299909120452,11.3104521225645,0,0,3.8614456457388,0,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| |||
|short_description=p1@PGM5 | |||
}} |
Revision as of 09:14, 14 September 2013
Short description: | p1@PGM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PGM5_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -280bp_to_ENST00000377314, ENST00000396392, ENST00000396396, NM_021965, uc004agr.2_5end |
EntrezGene: | PGM5 |
HGNC: | 8908 |
UniProt: | E9PBS8Q15124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.69e-31 | 114 |
cardiac chamber | 2.77e-08 | 3 |
valve | 3.76e-08 | 3 |
cardiac mesenchyme | 3.76e-08 | 3 |
cardial valve | 3.76e-08 | 3 |
tunica intima | 3.76e-08 | 3 |
heart layer | 3.76e-08 | 3 |
endocardium | 3.76e-08 | 3 |
endocardial cushion | 3.76e-08 | 3 |
presumptive endocardium | 3.76e-08 | 3 |
male genital duct | 7.18e-08 | 3 |
internal male genitalia | 7.18e-08 | 3 |
intestine | 5.04e-07 | 17 |
subdivision of digestive tract | 5.44e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.