FFCP PHASE1:Hg19::chr9:79792530..79792541,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23230|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1908|TSSclassifier=S|UniProt=|association_with_transcript=80bp_to_ENST00000357409_5end|description=CAGE_peak_4_at_VPS13A_5end|id=chr9:79792530..79792541,+|ontology_enrichment_celltype=CL:0000542!3.77e-11!53;CL:0000051!3.77e-11!53;CL:0000838!4.02e-11!52;CL:0000791!1.06e-07!18;CL:0000789!1.06e-07!18;CL:0002420!1.06e-07!18;CL:0002419!1.06e-07!18;CL:0000790!1.06e-07!18|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000838,9.25e-09,52;CL:0000542,1.59e-08,53;CL:0000051,1.59e-08,53|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.13e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001876,7.68e-07,2|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.125542639594803,0.687720651731561,0.328402357799783,0.629686250509434,0,0.383829398097213,0,0,0,0,0.697204805222715,1.13735385989937,0,0,0,0,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,1.32208974556972,0,1.70763890732835,0,0.764546456250458,0,0.560508562981536,0.526768169550154,1.180258620683,0.786021525498329,1.43921049299656,1.67186495390678,0.651844533267181,0,0,0.334231370655521,0.883817722424512,0.886135578334485,0.270803863765016,0.512365278902701,0.390178042679635,0.164437904603676,0.829050053357545,0.579606171470105,0.741432815810302,1.33770414044857,2.09071047609954,0.339928028092699,1.53288197440768,0.34362744548263,1.26509846009751,0.637130828648193,0.651083453856419,0.950452044448374,1.6563263098555,1.66382594500744,0,0.947109008176067,0.821127996921047,1.61285394579786,0.534880391567015,1.44824403882799,0,0,0.511450247374121,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.458426764241994,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,1.71598473234038,1.85728750664782,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,1.77883131343355,1.00416183829401,0,0,0.488124115096339,0,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,1.98613771219828,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,0,0,0.113432183160021,1.25572744982203,0,0.211931901159562,0.300091096084402,0.103052529238439,1.03056216018252,0.18611685633159,0.168776332241266,0,0.504867548488229,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0.487894824518382,0.795178609928912,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,2.20731549707325,0.122988438543114,0,0,0,0.301586917234893,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0.358234090811393,0.871901815541886,0,2.46331618947972,1.49682337822484,0.829312462163088,0.576479813667846,0.75745460055828,0.507983154337352,0,0,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,1.2162378064119,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0.448340575974109,0.591092280605782,1.72502059887614,1.02674429023799,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.623912584592421,0.356857977594324,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0,0,0,0,0.61384789315225,0.561320188866147,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,0.802025881213139,0,0,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0.657779629937804,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.640986253728404,0.577566499444116,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.356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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1908 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=80bp_to_ENST00000357409_5end | |||
|description=CAGE_peak_4_at_VPS13A_5end | |||
|id=chr9:79792530..79792541,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.77e-11!53;CL:0000051!3.77e-11!53;CL:0000838!4.02e-11!52;CL:0000791!1.06e-07!18;CL:0000789!1.06e-07!18;CL:0002420!1.06e-07!18;CL:0002419!1.06e-07!18;CL:0000790!1.06e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.25e-09,52;CL:0000542,1.59e-08,53;CL:0000051,1.59e-08,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,7.68e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.125542639594803,0.687720651731561,0.328402357799783,0.629686250509434,0,0.383829398097213,0,0,0,0,0.697204805222715,1.13735385989937,0,0,0,0,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,1.32208974556972,0,1.70763890732835,0,0.764546456250458,0,0.560508562981536,0.526768169550154,1.180258620683,0.786021525498329,1.43921049299656,1.67186495390678,0.651844533267181,0,0,0.334231370655521,0.883817722424512,0.886135578334485,0.270803863765016,0.512365278902701,0.390178042679635,0.164437904603676,0.829050053357545,0.579606171470105,0.741432815810302,1.33770414044857,2.09071047609954,0.339928028092699,1.53288197440768,0.34362744548263,1.26509846009751,0.637130828648193,0.651083453856419,0.950452044448374,1.6563263098555,1.66382594500744,0,0.947109008176067,0.821127996921047,1.61285394579786,0.534880391567015,1.44824403882799,0,0,0.511450247374121,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.458426764241994,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,1.71598473234038,1.85728750664782,0.198762407366705,0,0,0.56530794192401,0,0.275118041940067,0,0,1.77883131343355,1.00416183829401,0,0,0.488124115096339,0,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,1.98613771219828,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.494533858557114,0,0,0.505008341862199,0.250237039743928,0,0.438977620880838,0,0,0.113432183160021,1.25572744982203,0,0.211931901159562,0.300091096084402,0.103052529238439,1.03056216018252,0.18611685633159,0.168776332241266,0,0.504867548488229,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0.487894824518382,0.795178609928912,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,2.20731549707325,0.122988438543114,0,0,0,0.301586917234893,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.335964256397719,0.141775097242386,0.358234090811393,0.871901815541886,0,2.46331618947972,1.49682337822484,0.829312462163088,0.576479813667846,0.75745460055828,0.507983154337352,0,0,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,1.2162378064119,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0.448340575974109,0.591092280605782,1.72502059887614,1.02674429023799,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.623912584592421,0.356857977594324,0.473107245101804,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.347534457872331,0,0,0.620304078368662,0.215714200818617,0.74709290462411,0,0,0,0,0.61384789315225,0.561320188866147,0.128139149255701,0,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,0.802025881213139,0,0,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0.657779629937804,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.640986253728404,0.577566499444116,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0.165284915360978,0.576570202095319,3.31793052485919,0.6069466851333,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0.359744915166629,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,2.17781969722645,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0.427296284509893,0,0.735120647943095,0.371606350251437,0.721346064882224,0.640276590135727,0.318852545457645,0.399158742865633,0.5745161103971,0.846694330895531,0.973865820823666,0,0.684704037099577,0.47003968731907,0,0,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0.278406173895242,0,0,1.6653598399891,0,0.935702702041099,0.4395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| |||
|short_description=p4@VPS13A | |||
}} |
Revision as of 09:27, 14 September 2013
Short description: | p4@VPS13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_VPS13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_ENST00000357409_5end |
EntrezGene: | VPS13A |
HGNC: | 1908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.25e-09 | 52 |
lymphocyte | 1.59e-08 | 53 |
common lymphoid progenitor | 1.59e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
amygdala | 7.68e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.