FFCP PHASE1:Mm9::chr6:48856533..48856545,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48856533..48856545,+|id=chr6:48856533..48856545,+|ontology_enrichment_celltype=CL:0000239!2.99e-08!6;CL:0000677!2.99e-08!6;CL:0000212!2.99e-08!6;CL:0000584!2.99e-08!6;CL:0000075!4.51e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,1.59e-17,3;CL:0000473,4.45e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.48e-21!43;UBERON:0000344!1.77e-18!15;UBERON:0004923!3.97e-18!24;UBERON:0005409!6.85e-16!59;UBERON:0001242!2.00e-13!13;UBERON:0000060!2.00e-13!13;UBERON:0001262!2.00e-13!13;UBERON:0004786!2.00e-13!13;UBERON:0005795!5.64e-11!4;UBERON:0000995!5.64e-11!4;UBERON:0000331!2.53e-09!3;UBERON:0002116!2.53e-09!3;UBERON:0001204!2.53e-09!3;UBERON:0001168!2.53e-09!3;UBERON:0003975!8.34e-09!5;UBERON:0005631!1.53e-08!3;UBERON:0000478!1.53e-08!3;UBERON:0000158!1.53e-08!3;UBERON:0004119!2.88e-08!130;UBERON:0000925!2.88e-08!130;UBERON:0006595!2.88e-08!130;UBERON:0001962!1.22e-07!2;UBERON:0001961!1.22e-07!2;UBERON:0001744!1.22e-07!2;UBERON:0007023!5.37e-07!51;UBERON:0001007!9.55e-07!128;UBERON:0001555!9.55e-07!128;UBERON:0007026!9.55e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-26,2;UBERON:0001961,3.19e-26,2;UBERON:0001744,3.19e-26,2;UBERON:0002465,7.36e-18,3;UBERON:0003199,4.85e-14,1;UBERON:0000344,2.43e-08,15;UBERON:0001155,2.03e-07,2;UBERON:0000059,2.03e-07,2|phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,1.14846392823004,0,1.07735616342945,7.9809836171677,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:48856533..48856545,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:48856533..48856545,+ | |||
|id=chr6:48856533..48856545,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.99e-08!6;CL:0000677!2.99e-08!6;CL:0000212!2.99e-08!6;CL:0000584!2.99e-08!6;CL:0000075!4.51e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.59e-17,3;CL:0000473,4.45e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.48e-21!43;UBERON:0000344!1.77e-18!15;UBERON:0004923!3.97e-18!24;UBERON:0005409!6.85e-16!59;UBERON:0001242!2.00e-13!13;UBERON:0000060!2.00e-13!13;UBERON:0001262!2.00e-13!13;UBERON:0004786!2.00e-13!13;UBERON:0005795!5.64e-11!4;UBERON:0000995!5.64e-11!4;UBERON:0000331!2.53e-09!3;UBERON:0002116!2.53e-09!3;UBERON:0001204!2.53e-09!3;UBERON:0001168!2.53e-09!3;UBERON:0003975!8.34e-09!5;UBERON:0005631!1.53e-08!3;UBERON:0000478!1.53e-08!3;UBERON:0000158!1.53e-08!3;UBERON:0004119!2.88e-08!130;UBERON:0000925!2.88e-08!130;UBERON:0006595!2.88e-08!130;UBERON:0001962!1.22e-07!2;UBERON:0001961!1.22e-07!2;UBERON:0001744!1.22e-07!2;UBERON:0007023!5.37e-07!51;UBERON:0001007!9.55e-07!128;UBERON:0001555!9.55e-07!128;UBERON:0007026!9.55e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-26,2;UBERON:0001961,3.19e-26,2;UBERON:0001744,3.19e-26,2;UBERON:0002465,7.36e-18,3;UBERON:0003199,4.85e-14,1;UBERON:0000344,2.43e-08,15;UBERON:0001155,2.03e-07,2;UBERON:0000059,2.03e-07,2 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.90739263392049,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.83527424853736,1.14846392823004,0,1.07735616342945,7.9809836171677,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0,0,0,0,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:48856533..48856545,+ | |||
}} |
Revision as of 10:11, 14 September 2013
Short description: | p@chr6:48856533..48856545, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48856533..48856545, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.59e-17 | 3 |
defensive cell | 4.45e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.19e-26 | 2 |
mucosa-associated lymphoid tissue | 3.19e-26 | 2 |
lymphoid tissue | 3.19e-26 | 2 |
lymphoid system | 7.36e-18 | 3 |
egg chamber | 4.85e-14 | 1 |
mucosa | 2.43e-08 | 15 |
colon | 2.03e-07 | 2 |
large intestine | 2.03e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.