FFCP PHASE1:Mm9::chr8:22224074..22224079,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100041811,13236|HGNC=|MCL_coexpression_id=478|UniProt=D3Z691,Q5G864,E9Q5P7,D3Z1V9|association_with_transcript=-41bp_to_ENSMUST00000095424,ENSMUST00000095425,ENSMUST00000170275,NM_007849,uc012gaq.1_5end|description=CAGE_peak_1_at_Defa25_5end,CAGE_peak_1_at_Gm15299_5end|id=chr8:22224074..22224079,+|ontology_enrichment_celltype=CL:0000473!8.11e-17!3;CL:0000627!8.11e-17!3;CL:0000682!8.11e-17!3;CL:0000239!7.91e-09!6;CL:0000677!7.91e-09!6;CL:0000212!7.91e-09!6;CL:0000584!7.91e-09!6;CL:0000075!1.23e-07!7;CL:0000066!1.69e-07!25|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.58e-18!15;UBERON:0001962!2.30e-12!2;UBERON:0001961!2.30e-12!2;UBERON:0001744!2.30e-12!2;UBERON:0000160!8.17e-12!43;UBERON:0004923!6.85e-11!24;UBERON:0001242!9.95e-11!13;UBERON:0000060!9.95e-11!13;UBERON:0001262!9.95e-11!13;UBERON:0004786!9.95e-11!13;UBERON:0000331!1.20e-08!3;UBERON:0002116!1.20e-08!3;UBERON:0001204!1.20e-08!3;UBERON:0001168!1.20e-08!3;UBERON:0002465!1.55e-08!3;UBERON:0005409!2.98e-08!59;UBERON:0003199!6.09e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.40e-25,2;UBERON:0001961,2.40e-25,2;UBERON:0001744,2.40e-25,2;UBERON:0002465,2.82e-17,3;UBERON:0000344,8.94e-14,15;UBERON:0003199,2.06e-13,1;UBERON:0000160,1.77e-10,31;UBERON:0004923,8.68e-09,24;UBERON:0001155,1.14e-07,2;UBERON:0000059,1.14e-07,2;UBERON:0005409,5.41e-07,47|phase1_expression=0,0,0,0,0.500895729946347,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,6.46079626151671,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64450566663544,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Defa25,p1@Gm15299}} | ||
|EntrezGene=100041811,13236 | |||
|HGNC= | |||
|MCL_coexpression_id=478 | |||
|UniProt=D3Z691,Q5G864,E9Q5P7,D3Z1V9 | |||
|association_with_transcript=-41bp_to_ENSMUST00000095424,ENSMUST00000095425,ENSMUST00000170275,NM_007849,uc012gaq.1_5end | |||
|description=CAGE_peak_1_at_Defa25_5end,CAGE_peak_1_at_Gm15299_5end | |||
|id=chr8:22224074..22224079,+ | |||
|ontology_enrichment_celltype=CL:0000473!8.11e-17!3;CL:0000627!8.11e-17!3;CL:0000682!8.11e-17!3;CL:0000239!7.91e-09!6;CL:0000677!7.91e-09!6;CL:0000212!7.91e-09!6;CL:0000584!7.91e-09!6;CL:0000075!1.23e-07!7;CL:0000066!1.69e-07!25 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.58e-18!15;UBERON:0001962!2.30e-12!2;UBERON:0001961!2.30e-12!2;UBERON:0001744!2.30e-12!2;UBERON:0000160!8.17e-12!43;UBERON:0004923!6.85e-11!24;UBERON:0001242!9.95e-11!13;UBERON:0000060!9.95e-11!13;UBERON:0001262!9.95e-11!13;UBERON:0004786!9.95e-11!13;UBERON:0000331!1.20e-08!3;UBERON:0002116!1.20e-08!3;UBERON:0001204!1.20e-08!3;UBERON:0001168!1.20e-08!3;UBERON:0002465!1.55e-08!3;UBERON:0005409!2.98e-08!59;UBERON:0003199!6.09e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.40e-25,2;UBERON:0001961,2.40e-25,2;UBERON:0001744,2.40e-25,2;UBERON:0002465,2.82e-17,3;UBERON:0000344,8.94e-14,15;UBERON:0003199,2.06e-13,1;UBERON:0000160,1.77e-10,31;UBERON:0004923,8.68e-09,24;UBERON:0001155,1.14e-07,2;UBERON:0000059,1.14e-07,2;UBERON:0005409,5.41e-07,47 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.671517087647559,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.14704640533585,0.57423196411502,0.86152399231815,0.646413698057667,6.46079626151671,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64450566663544,0,0,0,0,0,0,0,0,0,0,0,1.79763881730844,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Defa25,p1@Gm15299 | |||
}} |
Revision as of 15:20, 14 September 2013
Short description: | p1@Defa25, p1@Gm15299 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Defa25_5end, CAGE_peak_1_at_Gm15299_5end |
Coexpression cluster: | MCL_coexpression_mm9:478 |
Association with transcript: | -41bp_to_ENSMUST00000095424, ENSMUST00000095425, ENSMUST00000170275, NM_007849, uc012gaq.1_5end |
EntrezGene: | 100041811,13236 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.40e-25 | 2 |
mucosa-associated lymphoid tissue | 2.40e-25 | 2 |
lymphoid tissue | 2.40e-25 | 2 |
lymphoid system | 2.82e-17 | 3 |
mucosa | 8.94e-14 | 15 |
egg chamber | 2.06e-13 | 1 |
intestine | 1.77e-10 | 31 |
organ component layer | 8.68e-09 | 24 |
colon | 1.14e-07 | 2 |
large intestine | 1.14e-07 | 2 |
gastrointestinal system | 5.41e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.