FFCP PHASE1:Mm9::chr9:71743910..71743915,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21406|HGNC=|UniProt=|association_with_transcript=-7bp_to_NM_001253863,NM_001253864_5end|description=CAGE_peak_7_at_Tcf12_5end|id=chr9:71743910..71743915,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,1.38e-15,9;CL:0000393,2.03e-08,39;CL:0000211,2.03e-08,39;CL:0000540,2.35e-08,33;CL:0000047,2.35e-08,33;CL:0000031,2.35e-08,33;CL:0000404,2.35e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.36e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.38e-15,9;UBERON:0000010,1.20e-12,11;UBERON:0010313,1.50e-12,3;UBERON:0002342,1.50e-12,3;UBERON:0002005,1.50e-12,3;UBERON:0005428,1.50e-12,3;UBERON:0005062,1.50e-12,3;UBERON:0002102,1.07e-08,7;UBERON:0004710,1.07e-08,7;UBERON:0005419,1.07e-08,7;UBERON:0005417,1.07e-08,7;UBERON:0005729,1.07e-08,7;UBERON:0010708,1.27e-07,8|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,0.183546752161682,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0,0.414758449233911,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0.263772575460388,0.365950574409639,1.56274011167028,0.279182999001381,0,0.30559649555362,0,1.13897344639282,0.186399445825301,0,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.635351135365324,0,0,0.502617408451458,0.521472960576829,0,0.20778804455956,0,0.509196819251581,0.248813941220186,0,0.210441855886474,0.650602214813519,0.689706313300419,0.360124259610698,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0,1.5089759505299,1.13463648100692,0.527853372491847,1.53437012699302,0.834141747676794,0.696504333044333,1.02891068203972,0.59710280045548,0,0.772043721344145,0,0.828503090142008,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.243206428637567,0.146199987425332,0,0.536825675041487,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.597423819763102,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,1.32643988239339,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,0.478364305972461,1.3109065177259,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,1.57754109708128,1.56175497718655,1.50796378412959,2.15071918157297,0.668396022247182,1.41538265394416,2.02405350837447,0.584511715822624,0.395287777946524,0.321321316421807,0,0.534196811001766,0.977321756121456,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.643011105094777,0.886701168211368,0.891844088010353,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.807322133479528,0.422190474497091,0,0.820704498725306,0,0.741701208042039,0,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0.949007980743406,1.01659733563424,0.108005340821801,0.836353184057875,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0,0.39736270956253,0.240390899039938,0.443068581523732,0,0.304827226619999,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,1.55681021376265,0,1.02440163452481,0.972426868273176,1.46729213839588,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.943131706930381,0.749132059759059,0.256100609619477,0.34461281373368,0,0.463537303779422,0.38581844092741,0,0.441596760403192,0.685738504770831,0.70990322463735,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.964533054905707,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0.661774257358546,0|short_description=p7@Tcf12}} | ||
|EntrezGene=21406 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_NM_001253863,NM_001253864_5end | |||
|description=CAGE_peak_7_at_Tcf12_5end | |||
|id=chr9:71743910..71743915,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.38e-15,9;CL:0000393,2.03e-08,39;CL:0000211,2.03e-08,39;CL:0000540,2.35e-08,33;CL:0000047,2.35e-08,33;CL:0000031,2.35e-08,33;CL:0000404,2.35e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.36e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.38e-15,9;UBERON:0000010,1.20e-12,11;UBERON:0010313,1.50e-12,3;UBERON:0002342,1.50e-12,3;UBERON:0002005,1.50e-12,3;UBERON:0005428,1.50e-12,3;UBERON:0005062,1.50e-12,3;UBERON:0002102,1.07e-08,7;UBERON:0004710,1.07e-08,7;UBERON:0005419,1.07e-08,7;UBERON:0005417,1.07e-08,7;UBERON:0005729,1.07e-08,7;UBERON:0010708,1.27e-07,8 | |||
|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,0.183546752161682,0,0,0,0,0.55994568650145,0,0,0,0,0.257259436035947,0.85960031981627,0,0,0,0.633831403506179,1.0165335962074,0,0,0,0,0,0,0.414758449233911,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0.263772575460388,0.365950574409639,1.56274011167028,0.279182999001381,0,0.30559649555362,0,1.13897344639282,0.186399445825301,0,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.635351135365324,0,0,0.502617408451458,0.521472960576829,0,0.20778804455956,0,0.509196819251581,0.248813941220186,0,0.210441855886474,0.650602214813519,0.689706313300419,0.360124259610698,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0,1.5089759505299,1.13463648100692,0.527853372491847,1.53437012699302,0.834141747676794,0.696504333044333,1.02891068203972,0.59710280045548,0,0.772043721344145,0,0.828503090142008,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0.32833492815819,0.243206428637567,0.146199987425332,0,0.536825675041487,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.597423819763102,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,1.32643988239339,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,0.478364305972461,1.3109065177259,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,1.57754109708128,1.56175497718655,1.50796378412959,2.15071918157297,0.668396022247182,1.41538265394416,2.02405350837447,0.584511715822624,0.395287777946524,0.321321316421807,0,0.534196811001766,0.977321756121456,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.643011105094777,0.886701168211368,0.891844088010353,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0.32977250588296,0.807322133479528,0.422190474497091,0,0.820704498725306,0,0.741701208042039,0,0.412773735926445,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0.949007980743406,1.01659733563424,0.108005340821801,0.836353184057875,0.218362563746178,0.404593039154462,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0,0.39736270956253,0.240390899039938,0.443068581523732,0,0.304827226619999,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,1.55681021376265,0,1.02440163452481,0.972426868273176,1.46729213839588,0.551530525350042,0.44449345560323,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.943131706930381,0.749132059759059,0.256100609619477,0.34461281373368,0,0.463537303779422,0.38581844092741,0,0.441596760403192,0.685738504770831,0.70990322463735,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.964533054905707,0.499621155875892,0.467863216890817,0.859484216193193,0.382576664137687,0.661774257358546,0 | |||
|short_description=p7@Tcf12 | |||
}} |
Revision as of 18:40, 14 September 2013
Short description: | p7@Tcf12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tcf12_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_001253863, NM_001253864_5end |
EntrezGene: | Tcf12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.38e-15 | 9 |
electrically responsive cell | 2.03e-08 | 39 |
electrically active cell | 2.03e-08 | 39 |
neuron | 2.35e-08 | 33 |
neuronal stem cell | 2.35e-08 | 33 |
neuroblast | 2.35e-08 | 33 |
electrically signaling cell | 2.35e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.38e-15 | 9 |
peripheral nervous system | 1.20e-12 | 11 |
neural crest-derived structure | 1.50e-12 | 3 |
neural crest | 1.50e-12 | 3 |
enteric nervous system | 1.50e-12 | 3 |
vagal neural crest | 1.50e-12 | 3 |
neural fold | 1.50e-12 | 3 |
forelimb | 1.07e-08 | 7 |
pectoral appendage | 1.07e-08 | 7 |
pectoral appendage bud | 1.07e-08 | 7 |
forelimb bud | 1.07e-08 | 7 |
forelimb/pectoral fin field | 1.07e-08 | 7 |
pectoral complex | 1.27e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.