FFCP PHASE1:Hg19::chr1:3607228..3607250,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |||
|TSSclassifier=strong | |||
|UniProt=O15350 | |||
|association_with_transcript=0bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_8_at_TP73_5end | |||
|id=chr1:3607228..3607250,+ | |||
|ontology_enrichment_celltype=CL:0002623!7.98e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.24e-46;3!CL:0000622;3.66e-28;5!CL:0000154;1.34e-23;6!CL:0000150;5.71e-16;9!CL:0000123;3.43e-09;2!CL:0000242;3.43e-09;2!CL:0000575;6.93e-09;2!CL:0000095;6.78e-08;17!CL:0002251;1.66e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.65e-46,3;CL:0000622,3.04e-28,5;CL:0000154,1.15e-23,6;CL:0000150,5.16e-16,9;CL:0000242,3.43e-09,2;CL:0000575,6.94e-09,2;CL:0000095,6.94e-08,17;CL:0000123,6.94e-08,17;CL:0002251,1.59e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.93e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.34e-11!10;UBERON:0001896!5.00e-10!3;UBERON:0005290!5.00e-10!3;UBERON:0010096!5.00e-10!3;UBERON:0000153!8.85e-10!129;UBERON:0007811!8.85e-10!129;UBERON:0000924!1.79e-09!173;UBERON:0006601!1.79e-09!173;UBERON:0002298!3.29e-09!8;UBERON:0001044!4.35e-09!6;UBERON:0003293!4.35e-09!6;UBERON:0003294!4.35e-09!6;UBERON:0010047!4.35e-09!6;UBERON:0000167!4.35e-09!6;UBERON:0004121!5.57e-09!169;UBERON:0000166!2.88e-08!21;UBERON:0001004!6.74e-08!72;UBERON:0000033!8.69e-08!123;UBERON:0000165!1.91e-07!28;UBERON:0000930!1.91e-07!28;UBERON:0000974!2.02e-07!10;UBERON:0003127!3.44e-07!2;UBERON:0007023!9.10e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.34e-23;6!UBERON:0003293;1.34e-23;6!UBERON:0003294;1.34e-23;6!UBERON:0010047;1.34e-23;6!UBERON:0003408;1.34e-23;6!UBERON:0000167;1.34e-23;6!UBERON:0001301;1.93e-16;1!UBERON:0001041;1.73e-10;14!UBERON:0000161;7.11e-08;19!UBERON:0000166;7.11e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.15e-23,6;UBERON:0003293,1.15e-23,6;UBERON:0003294,1.15e-23,6;UBERON:0010047,1.15e-23,6;UBERON:0000167,1.15e-23,6;UBERON:0001301,2.63e-16,1;UBERON:0003408,1.77e-14,10;UBERON:0000166,6.89e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,1.43176155503017,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,6.55012409158783,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,1.14681839138014,0.554645257684261,0.310482014706917,0.138348634936231,2.62458856720424,0,0,0,0,44.6356768121342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0.88332946650923,0,0.366857197043358,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,8.09007724054255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,1.65772931330429,4.26796192734875,5.53007729451273,0.860454717640555,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.407955318967927,0,1.56221329209236,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.620747142958579,0,0,0,0,0.342233301085281,0.0673520530145875,0.860666464712116,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |||
|short_description=p8@TP73 | |||
}} |
Revision as of 15:59, 10 January 2014
Short description: | p8@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 0bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.65e-46 | 3 |
acinar cell | 3.04e-28 | 5 |
protein secreting cell | 1.15e-23 | 6 |
glandular epithelial cell | 5.16e-16 | 9 |
Merkel cell | 3.43e-09 | 2 |
corneal epithelial cell | 6.94e-09 | 2 |
neuron associated cell | 6.94e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.94e-08 | 17 |
epithelial cell of alimentary canal | 1.59e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.15e-23 | 6 |
gland of oral region | 1.15e-23 | 6 |
gland of foregut | 1.15e-23 | 6 |
oral gland | 1.15e-23 | 6 |
oral cavity | 1.15e-23 | 6 |
epididymis | 2.63e-16 | 1 |
gland of gut | 1.77e-14 | 10 |
oral opening | 6.89e-07 | 22 |