FFCP PHASE1:Hg19::chr1:78958342..78958353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5737 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9600 | |||
|TSSclassifier=strong | |||
|UniProt=P43088 | |||
|association_with_transcript=-75bp_to_AB464672,AY337000,DQ890957,DQ894120_5end | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_3_at_PTGFR_5end | |||
|id=chr1:78958342..78958353,+ | |||
|ontology_enrichment_celltype=CL:0000594!2.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002561;1.09e-49;2!CL:0002559;1.34e-20;5!CL:0000362;6.51e-12;9!CL:0002521;1.24e-09;3!CL:0002159;5.36e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.40e-49,2;CL:0002559,1.48e-20,5;CL:0000362,6.88e-12,9;CL:0002521,1.30e-09,3;CL:0002159,5.55e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.64e-08!32;UBERON:0002791!7.70e-08!33;UBERON:0002619!1.55e-07!22;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0001893!1.56e-07!34;UBERON:0007023!2.73e-07!115;UBERON:0003102!7.84e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.09e-49;2!UBERON:0005942;1.09e-49;2!UBERON:0005932;1.09e-49;2!UBERON:0007029;4.06e-26;1!UBERON:0002073;1.34e-20;5!UBERON:0001003;1.72e-15;15!UBERON:0007376;1.72e-15;15!UBERON:0002190;1.24e-09;3!UBERON:0001013;4.11e-08;14!UBERON:0002199;5.79e-08;46!UBERON:0002416;5.79e-08;46!UBERON:0010371;1.07e-07;31!UBERON:0002346;1.31e-07;4!UBERON:0000923;1.31e-07;4!UBERON:0010316;1.31e-07;4!UBERON:0005291;1.31e-07;4!UBERON:0000014;1.54e-07;4!UBERON:0003102;2.06e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.40e-49,2;UBERON:0005942,1.40e-49,2;UBERON:0005932,1.40e-49,2;UBERON:0007029,3.58e-26,1;UBERON:0002073,1.48e-20,5;UBERON:0005086,1.48e-20,5;UBERON:0001003,1.76e-15,15;UBERON:0007376,1.76e-15,15;UBERON:0007383,1.76e-15,15;UBERON:0002190,1.30e-09,3;UBERON:0002199,4.91e-09,46;UBERON:0002416,4.91e-09,46;UBERON:0001013,4.19e-08,14;UBERON:0000014,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,3.3954131665979,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.204154171254893,0,2.58314452939414,0,0.494533858557114,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0.675105328965065,0.292311015483596,0,0.184099797284599,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.751941714077915,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0.889811221596536,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0.169732529954025,0.850299680406731,0,0,0,0,0,0.352675943690684,0,0.321146125482298,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,38.3399312703973,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0.222462803784138,0.156986185701028,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88568794447312,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0.653150243690884,0,0.134704106029175,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p3@PTGFR | |||
}} |
Revision as of 19:13, 10 January 2014
Short description: | p3@PTGFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGFR_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -75bp_to_AB464672, AY337000, DQ890957, DQ894120_5end |
EntrezGene: | PTGFR |
HGNC: | 9600 |
UniProt: | P43088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.40e-49 | 2 |
hair follicle cell | 1.48e-20 | 5 |
epidermal cell | 6.88e-12 | 9 |
subcutaneous fat cell | 1.30e-09 | 3 |
general ecto-epithelial cell | 5.55e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.40e-49 | 2 |
hair outer root sheath | 1.40e-49 | 2 |
bulb of hair follicle | 1.40e-49 | 2 |
surface | 3.58e-26 | 1 |
hair follicle | 1.48e-20 | 5 |
hair follicle placode | 1.48e-20 | 5 |
skin epidermis | 1.76e-15 | 15 |
outer epithelium | 1.76e-15 | 15 |
enveloping layer of ectoderm | 1.76e-15 | 15 |
subcutaneous adipose tissue | 1.30e-09 | 3 |
integument | 4.91e-09 | 46 |
integumental system | 4.91e-09 | 46 |
adipose tissue | 4.19e-08 | 14 |
zone of skin | 1.49e-07 | 4 |