FFCP PHASE1:Hg19::chr1:152140653..152140680,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C182 | |||
|description=CAGE_peak_at_chr1:152140653..152140680,+ | |||
|id=chr1:152140653..152140680,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.60e-25!254;CL:0002076!2.56e-15!43;CL:0000223!1.12e-12!59;CL:0000076!9.23e-12!62;CL:0002251!6.00e-11!21;CL:0000220!1.06e-09!246;CL:0002321!1.68e-09!248;CL:0000077!3.93e-09!19;CL:0002623!6.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;8.73e-25;3!CL:0000622;4.02e-15;5!CL:0000154;1.07e-12;6!CL:0002573;1.29e-11;2!CL:0002251;4.85e-10;20!CL:0002076;9.37e-09;42!CL:0000150;1.24e-08;9!CL:0000082;5.25e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.44e-25,3;CL:0000622,3.66e-15,5;CL:0000154,9.92e-13,6;CL:0002573,1.22e-11,2;CL:0002076,2.40e-11,42;CL:0002251,4.76e-10,20;CL:0000150,1.18e-08,9;CL:0000223,6.42e-08,58;CL:0000066,4.47e-07,253;CL:0000082,4.93e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.39e-16!14;DOID:14566!1.76e-09!239;DOID:305!6.30e-09!106;DOID:162!9.74e-09!235;DOID:0050687!8.16e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.57e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.70e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001444!5.29e-09!48;UBERON:0001004!5.93e-09!72;UBERON:0003729!1.57e-08!5;UBERON:0003343!1.41e-07!4;UBERON:0004785!1.41e-07!4;UBERON:0000488!4.21e-07!4;UBERON:0007625!9.83e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.07e-12;6!UBERON:0003293;1.07e-12;6!UBERON:0003294;1.07e-12;6!UBERON:0010047;1.07e-12;6!UBERON:0003408;1.07e-12;6!UBERON:0000167;1.07e-12;6!UBERON:0000161;1.40e-10;19!UBERON:0000166;1.40e-10;19!UBERON:0003343;3.26e-09;4!UBERON:0004785;3.26e-09;4!UBERON:0000165;4.10e-07;28!UBERON:0004802;5.25e-07;19!UBERON:0000115;5.25e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.92e-13,6;UBERON:0003293,9.92e-13,6;UBERON:0003294,9.92e-13,6;UBERON:0010047,9.92e-13,6;UBERON:0000167,9.92e-13,6;UBERON:0001004,2.24e-09,74;UBERON:0003343,3.40e-09,4;UBERON:0004785,3.40e-09,4;UBERON:0000166,4.06e-09,22;UBERON:0003408,7.78e-08,10;UBERON:0004802,4.93e-07,19;UBERON:0000115,4.93e-07,19;UBERON:0000165,7.26e-07,29;UBERON:0000930,7.26e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.886917589850256,0.087834785693126,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0.772921620136887,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.695582429850461,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,0,0.708875486211932,0.268675568108545,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552485933615378,0,0,0,0,0.231046011313244,0,0,0.633309773357254,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,1.79515087581472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,2.55225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.37649284461163,0,0,0,0,0,0,0,0,0,0,0,1.1249555075237,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.391969589657511,0.522355239482415,0,0,0,0,0,0.290967049465258,0,0,4.38534158869603,0,0,0,0.320635281006135,0,0,0,0.114536596165916,0,0,0.124252535565433,1.88555227693436,0.135904206073614,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0.358177682162975,0.308801447160972,0.877136198314828,0.883445729729405,1.73622634443823,0,0.256241518587947,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.34255607258718,0.11796972334774,2.38457178078183,0.462102664601353,1.52552838186867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0.514464028312255,0,0,0.118193840883968,0,0,0,0.560544326627578,0,37.3554732808215,0.47775168788705,0,0,0,0,0,1.86494547746733,3.0729325876911,2.07377898544228,0,1.53831600949735,2.55640214277473,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,6.66381884029864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46384846514144,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr1:152140653..152140680,+ | |||
}} |
Revision as of 20:54, 10 January 2014
Short description: | p@chr1:152140653..152140680, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152140653..152140680, + |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.44e-25 | 3 |
acinar cell | 3.66e-15 | 5 |
protein secreting cell | 9.92e-13 | 6 |
Schwann cell | 1.22e-11 | 2 |
endo-epithelial cell | 2.40e-11 | 42 |
epithelial cell of alimentary canal | 4.76e-10 | 20 |
glandular epithelial cell | 1.18e-08 | 9 |
endodermal cell | 6.42e-08 | 58 |
epithelial cell | 4.47e-07 | 253 |
epithelial cell of lung | 4.93e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 9.92e-13 | 6 |
gland of oral region | 9.92e-13 | 6 |
gland of foregut | 9.92e-13 | 6 |
oral gland | 9.92e-13 | 6 |
oral cavity | 9.92e-13 | 6 |
respiratory system | 2.24e-09 | 74 |
mucosa of oral region | 3.40e-09 | 4 |
respiratory system mucosa | 3.40e-09 | 4 |
oral opening | 4.06e-09 | 22 |
gland of gut | 7.78e-08 | 10 |
respiratory tract epithelium | 4.93e-07 | 19 |
lung epithelium | 4.93e-07 | 19 |
mouth | 7.26e-07 | 29 |
stomodeum | 7.26e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.70e-09 | 14 |