FFCP PHASE1:Hg19::chr1:152975474..152975485,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=6707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11268 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZ12 | |||
|association_with_transcript=-11bp_to_ENST00000542696_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_SPRR3_5end | |||
|id=chr1:152975474..152975485,+ | |||
|ontology_enrichment_celltype=CL:0002537!1.01e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0002231;3.24e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.84e-34;1!UBERON:0008814;7.67e-18;2!UBERON:0010056;7.67e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0000002!3.56e-09!6;UBERON:0001560!3.56e-09!6;UBERON:0005631!1.89e-08!14;UBERON:0000158!1.89e-08!14;UBERON:0000305!6.52e-08!7;UBERON:0000341!9.87e-08!2;UBERON:0003127!1.54e-07!2;UBERON:0004871!4.99e-07!8;UBERON:0000078!6.95e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.97e-34;1!UBERON:0005795;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0000341;6.48e-18;2!UBERON:0006562;9.87e-18;2!UBERON:0001043;1.85e-12;3!UBERON:0001723;2.31e-12;3!UBERON:0001033;2.31e-12;3!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5!UBERON:0000974;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,7.06e-34,1;UBERON:0001961,7.06e-34,1;UBERON:0001744,7.06e-34,1;UBERON:0001735,7.06e-34,1;UBERON:0000341,6.48e-18,2;UBERON:0001042,3.47e-14,10;UBERON:0009145,3.47e-14,10;UBERON:0006562,5.42e-13,11;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0001723,2.31e-12,3;UBERON:0001033,2.31e-12,3;UBERON:0010056,2.31e-12,3;UBERON:0000161,5.73e-09,36;UBERON:0001557,6.15e-08,19;UBERON:0000166,5.57e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.923403102045565,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6386819786103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4484651131481,0,0,0,0,0,0,6.31378568901188,0,2.1552656964668,0.645499848534087,0,0,0,0,0,0,0,2.44137706989443,0,0,0 | |||
|short_description=p2@SPRR3 | |||
}} |
Revision as of 20:56, 10 January 2014
Short description: | p2@SPRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_SPRR3_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -11bp_to_ENST00000542696_5end |
EntrezGene: | SPRR3 |
HGNC: | 11268 |
UniProt: | F5GZ12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 7.06e-34 | 1 |
mucosa-associated lymphoid tissue | 7.06e-34 | 1 |
lymphoid tissue | 7.06e-34 | 1 |
tonsillar ring | 7.06e-34 | 1 |
throat | 6.48e-18 | 2 |
chordate pharynx | 3.47e-14 | 10 |
pharyngeal region of foregut | 3.47e-14 | 10 |
pharynx | 5.42e-13 | 11 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
tongue | 2.31e-12 | 3 |
gustatory system | 2.31e-12 | 3 |
future tongue | 2.31e-12 | 3 |
orifice | 5.73e-09 | 36 |
upper respiratory tract | 6.15e-08 | 19 |
oral opening | 5.57e-07 | 22 |