FFCP PHASE1:Hg19::chr1:155048171..155048179,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr1:155048171..155048179,+ | |||
|id=chr1:155048171..155048179,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.05e-79!2;CL:0002553!2.21e-40!1;CL:0000312!1.05e-32!5;CL:0000240!1.82e-27!6;CL:0000311!1.82e-27!6;CL:0000079!1.82e-27!6;CL:0000237!1.82e-27!6;CL:0000036!1.82e-27!6;CL:0000357!1.82e-27!6;CL:0000114!1.82e-27!6;CL:0000362!6.64e-21!8;CL:0002159!2.68e-13!13;CL:0000095!1.99e-09!17;CL:0000123!1.99e-09!17;CL:0000035!5.26e-09!20;CL:0002319!6.43e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.60e-131;2!CL:0000242;4.60e-131;2!CL:0000312;2.19e-53;5!CL:0000240;9.76e-45;6!CL:0000311;9.76e-45;6!CL:0000079;9.76e-45;6!CL:0000237;9.76e-45;6!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25!CL:0002077;1.20e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;9.76e-45;6!CL:0000114;9.76e-45;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!6.96e-21!2;UBERON:0001003!2.00e-12!14;UBERON:0007376!2.00e-12!14;UBERON:0007383!2.00e-12!14;UBERON:0003296!3.79e-11!4;UBERON:0010133!3.79e-11!4;UBERON:0001894!6.39e-07!7;UBERON:0006222!6.39e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37275998289572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68334905806882,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:155048171..155048179,+ | |||
}} |
Revision as of 21:13, 10 January 2014
Short description: | p@chr1:155048171..155048179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155048171..155048179, + |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.61e-131 | 2 |
keratinocyte | 2.19e-53 | 5 |
stratified squamous epithelial cell | 9.76e-45 | 6 |
keratin accumulating cell | 9.76e-45 | 6 |
stratified epithelial cell | 9.76e-45 | 6 |
keratinizing barrier epithelial cell | 9.76e-45 | 6 |
epithelial fate stem cell | 9.76e-45 | 6 |
stratified epithelial stem cell | 9.76e-45 | 6 |
surface ectodermal cell | 9.76e-45 | 6 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
ecto-epithelial cell | 6.54e-09 | 34 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.04e-18 | 15 |
outer epithelium | 1.04e-18 | 15 |
enveloping layer of ectoderm | 1.04e-18 | 15 |
skin of body | 1.42e-07 | 41 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |