FFCP PHASE1:Hg19::chr10:91043499..91043510,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000354541_5end | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_2_at_ENST00000354541_5end | |||
|id=chr10:91043499..91043510,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.33e-07!254;CL:0000239!8.18e-07!3;CL:1000615!8.18e-07!3;CL:0002306!8.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.56e-27;3!CL:1000615;3.56e-27;3!CL:0002306;3.56e-27;3!CL:0000342;5.16e-21;1!CL:0002565;5.16e-21;1!CL:0002535;2.12e-11;2!CL:1000507;7.36e-09;10!CL:1000494;7.36e-09;10!CL:0002681;1.57e-07;12!CL:0002584;1.57e-07;12!CL:0000075;3.30e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.11e-27,3;CL:1000615,3.11e-27,3;CL:0002306,3.11e-27,3;CL:0000342,6.31e-21,1;CL:0002565,6.31e-21,1;CL:0002535,2.02e-11,2;CL:1000507,7.07e-09,10;CL:1000494,7.07e-09,10;CL:0002681,1.52e-07,12;CL:0002584,1.52e-07,12;CL:0000075,3.16e-07,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!6.11e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.57e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.54e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000020!1.33e-08!23;UBERON:0000970!1.34e-08!20;UBERON:0000488!3.09e-08!4;UBERON:0001032!4.07e-08!24;UBERON:0004456!4.07e-08!24;UBERON:0002104!4.65e-08!21;UBERON:0000019!1.33e-07!19;UBERON:0000047!1.33e-07!19;UBERON:0004088!1.33e-07!19;UBERON:0003072!1.33e-07!19;UBERON:0003071!1.33e-07!19;UBERON:0004128!1.33e-07!19;UBERON:0007625!1.66e-07!11;UBERON:0001801!3.37e-07!14;UBERON:0006853!8.18e-07!3;UBERON:0007685!8.18e-07!3;UBERON:0004134!8.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.56e-27;3!UBERON:0007685;3.56e-27;3!UBERON:0004134;3.56e-27;3!UBERON:0002506;5.16e-21;1!UBERON:0001769;5.16e-21;1!UBERON:0006955;2.12e-11;2!UBERON:0004801;2.12e-11;2!UBERON:0004211;7.36e-09;10!UBERON:0009773;7.36e-09;10!UBERON:0001231;7.36e-09;10!UBERON:0004810;7.36e-09;10!UBERON:0007625;3.89e-08;11!UBERON:0001225;1.57e-07;12!UBERON:0008987;1.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.11e-27,3;UBERON:0007685,3.11e-27,3;UBERON:0004134,3.11e-27,3;UBERON:0002506,6.31e-21,1;UBERON:0001769,6.31e-21,1;UBERON:0006955,2.02e-11,2;UBERON:0004801,2.02e-11,2;UBERON:0004810,7.07e-09,10;UBERON:0007625,3.90e-08,11;UBERON:0001225,1.52e-07,12;UBERON:0008987,1.52e-07,12 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.886917589850256,0.790513071238134,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0.257640540045629,0,1.0126579934476,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,1.01950509218015,1.66215201785745,0.671624264166535,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0,10.1340195901437,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0.774054819518572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0,0,0,2.56148591426813,0,0.173559738335131,0,2.61177619741208,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.221858103073705,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0.438568099157414,0.530067437837643,0,0.675769762612291,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0.0981477185010256,0,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.131545547125698,0,0.778619813244484,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,1.50962843566674,0,0,0,0,0.235676547101626,0.392616934229891,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0.560659312903067,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p2@ENST00000354541 | |||
}} |
Revision as of 04:04, 11 January 2014
Short description: | p2@ENST00000354541 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000354541_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -11bp_to_ENST00000354541_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.11e-27 | 3 |
kidney cortex tubule cell | 3.11e-27 | 3 |
epithelial cell of proximal tubule | 3.11e-27 | 3 |
pigment cell (sensu Vertebrata) | 6.31e-21 | 1 |
iris pigment epithelial cell | 6.31e-21 | 1 |
epithelial cell of cervix | 2.02e-11 | 2 |
kidney tubule cell | 7.07e-09 | 10 |
nephron tubule epithelial cell | 7.07e-09 | 10 |
kidney cortical cell | 1.52e-07 | 12 |
renal cortical epithelial cell | 1.52e-07 | 12 |
columnar/cuboidal epithelial cell | 3.16e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.11e-27 | 3 |
region of nephron tubule | 3.11e-27 | 3 |
proximal tubule | 3.11e-27 | 3 |
iris epithelium | 6.31e-21 | 1 |
iris | 6.31e-21 | 1 |
uterine epithelium | 2.02e-11 | 2 |
cervix epithelium | 2.02e-11 | 2 |
nephron tubule epithelium | 7.07e-09 | 10 |
pigment epithelium of eye | 3.90e-08 | 11 |
cortex of kidney | 1.52e-07 | 12 |
renal parenchyma | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.54e-13 | 14 |