FFCP PHASE1:Hg19::chr11:3078616..3078662,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=833 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |||
|TSSclassifier=strong | |||
|UniProt=A8MVQ3,B4DKY1,C9JLN0,E9PRS8,E9PPK8 | |||
|association_with_transcript=0bp_to_ENST00000278224,ENST00000397114,ENST00000401769,ENST00000439280,ENST00000527330,ENST00000529772_5end | |||
|description=CAGE_peak_1_at_CARS_5end | |||
|id=chr11:3078616..3078662,- | |||
|ontology_enrichment_celltype=CL:0000548!2.08e-23!679;CL:0000004!2.08e-23!679;CL:0000255!2.08e-23!679;CL:0000012!5.09e-22!682;CL:0000144!5.06e-17!625;CL:0000055!9.06e-17!180;CL:0002371!1.54e-15!591;CL:0000003!4.04e-15!722;CL:0000057!2.66e-14!75;CL:0000063!8.11e-09!578;CL:0002321!1.86e-08!248;CL:0000220!1.87e-08!246;CL:0002620!3.84e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.62e-08;23!CL:0000057;2.63e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.77e-14,76;CL:0002321,8.37e-09,250;CL:0002620,3.84e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.10e-09!95;UBERON:0002097!2.06e-08!40;UBERON:0002199!3.49e-08!45;UBERON:0002416!3.49e-08!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.12e-10,99;UBERON:0002097,2.56e-08,41;UBERON:0002199,4.15e-08,46;UBERON:0002416,4.15e-08,46 | |||
|phase1_expression=62.4973624690715,61.4468503567122,67.6581139660662,52.0381151436278,43.3552261594469,59.3190196388251,40.5279805069297,52.432749494427,47.0134130759709,43.7406406972686,36.2856607345662,48.0571018686379,31.388270409186,59.7791484797025,52.0293879892828,26.893005858071,27.121253761079,27.7517834347202,21.9569759455728,40.1374649330329,32.0281085253477,75.8560425976973,35.7794983913821,41.6098252221568,38.16496243682,31.7879767911477,31.2803245804293,34.5540329967052,12.194292582316,20.7267874972495,10.8371286321253,35.8574277546782,61.446007430763,106.489154928035,32.1488882408252,33.9784465644937,8.22081230137572,11.0799081706375,14.8402891127905,14.3227174672462,29.55684259967,24.9398122834614,17.5151385991247,34.4593825907568,57.8150193843878,40.0263700959897,49.5073848609108,84.2894170444743,59.4636232118599,84.8692557350344,106.306693209577,75.6743135643473,28.958637181876,33.565203546359,13.5426486594342,35.5778021735523,67.1349129142301,55.5067006579359,48.9734227793444,60.3346570903056,38.9995646737415,53.1060593300613,77.9902901300581,83.1138263538754,67.9089618390887,89.6468655012001,59.7909359035752,73.8671075854825,78.7439206814504,67.9801083927015,64.7777467817705,63.7120310258487,44.9376590166056,20.9142733448822,20.4100127966442,16.7726916406701,17.2986091965602,21.6254725691769,16.5547354297993,23.3710449867824,25.8591680358817,26.4863022958719,29.9193615584249,20.753267227961,19.5692035849982,21.7632413508919,22.0217792869807,17.817325638589,19.8313461835459,26.7135051269902,18.2148150115023,15.2681669236444,17.5845684937605,2.64342657158052,17.3757654524276,11.5888997301034,14.5565229884236,17.2924735609632,20.9713528979499,24.0748553362576,10.7554347989085,16.5706732007157,23.3792074089494,27.8526142212934,27.9875612101095,29.6855418742052,28.4344056953266,32.0228299314188,31.7344808046103,18.7459211248191,22.3843514406537,19.1270036585135,13.4940772477475,11.7717964359474,13.589618094647,22.8884872249084,20.3106861609018,14.0887252647878,22.5187525897358,23.5738406599832,25.3922547004003,24.7117531556577,17.3161386939439,21.8857105074055,22.4875307794223,19.6525119196534,18.8859439291841,14.7172922554055,21.3952156626806,15.3513868115767,36.5710299470943,27.4987352478491,68.7900582718193,59.6374601434534,95.7555409314549,59.966458849781,39.764297352555,40.8773291054214,32.8981163730956,28.1596334777456,29.1611488501178,23.248785900844,70.6732859287532,68.9659063579039,12.9818957461873,12.363211348248,13.827627893962,7.3932093534656,11.4398982156026,9.65789503456869,46.3116409164423,55.9152486818981,36.4497526687974,36.1797082831366,44.0474408020401,33.0141650328081,39.9180386085308,28.6842602677955,29.5285998029969,36.8192674041137,30.6150281002952,39.5341494973627,34.6568121718401,30.1483725883612,40.507097394088,35.3626924004956,28.9642890687759,29.0537619646971,39.8623257411296,37.021360723157,40.8539888964808,47.4409502769828,62.0448422637321,78.9330234377987,65.600297623782,64.8348219722648,79.3130993071181,125.921276508729,51.4269154187618,51.0216616129499,74.7242970107935,45.3868289087574,24.5856717965815,66.2776506582865,29.0962187541957,60.9970433409074,61.0746479948799,211.357931514085,41.2051301416023,61.0404849052561,41.2478358322971,73.9837341455719,65.3966695247251,53.6522081602589,60.8379430339582,44.3431885495482,89.3768007170371,60.5881457213847,52.4205890070541,118.320977051943,76.1735230325213,49.9958258443577,51.2985931475053,49.3174125561846,61.4568669233173,64.0559493219951,45.5221318486988,39.1341031902073,113.374249755361,94.1788084689882,81.3818500452717,117.635709665086,66.8810914757468,152.007918626921,86.5443381941893,102.784786334931,86.5240605831444,121.168211637175,81.2800605011503,53.5048448070267,109.697964087634,56.8241834003891,59.8548890856021,46.3826047591912,48.2760633445777,40.7262525452385,39.7634281982481,37.3733946666588,30.5590069746833,27.8848237991346,27.5029727454435,39.4175547801896,73.5312801950135,46.3133475498877,62.1607146086162,36.6850663145263,39.7033714918272,14.9066568050203,19.7244087391379,13.7376287033585,18.6396813917746,20.0449088565014,16.3716727186657,13.2134681996961,17.4637103961558,16.5441277486948,22.1446636387394,57.4991272594128,41.15740113314,38.2222649602409,16.478154526838,61.9181146506904,29.5394953340702,25.6048597660497,35.0517049847874,43.406656005527,40.4978553157828,120.269875985653,51.470833874755,51.2014101726669,129.020088902889,86.314587178205,41.8560891873293,28.5188796238689,54.4776341254213,29.0176559999758,17.1304639653346,26.2550730083746,15.0138835612262,12.8772924314231,16.0041053956808,15.2102772340504,16.6466901763376,45.9295786535207,43.3393890753058,43.8085050478974,77.3785636152609,68.2989755507811,45.6225388206601,15.7652236126702,18.4901711427775,12.2323588169056,10.9531164596891,14.7703647108865,17.652414613223,33.9969698746867,21.0991404978085,34.214489204541,18.6117761793016,19.8226418176986,19.4361974188793,84.3225754277113,56.2388488794931,42.2428526328672,54.294120618266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| |||
|short_description=p1@CARS | |||
}} |
Revision as of 06:14, 11 January 2014
Short description: | p1@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000278224, ENST00000397114, ENST00000401769, ENST00000439280, ENST00000527330, ENST00000529772_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | A8MVQ3B4DKY1C9JLN0E9PRS8E9PPK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.77e-14 | 76 |
embryonic cell | 8.37e-09 | 250 |
skin fibroblast | 3.84e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.12e-10 | 99 |
skin of body | 2.56e-08 | 41 |
integument | 4.15e-08 | 46 |
integumental system | 4.15e-08 | 46 |