FFCP PHASE1:Hg19::chr11:119039069..119039081,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29890 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000397884_5end | |||
|coexpression_cluster_id=C683 | |||
|description=CAGE_peak_9_at_NLRX1_5end | |||
|id=chr11:119039069..119039081,+ | |||
|ontology_enrichment_celltype=CL:0000244!1.27e-12!4;CL:0000731!1.27e-12!4;CL:0002076!3.79e-12!43;CL:0000575!6.76e-12!2;CL:0002368!1.44e-09!13;CL:0000223!2.67e-08!59;CL:0002251!3.29e-08!21;CL:0002328!5.22e-08!3;CL:0002623!7.39e-08!3;CL:0002621!1.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000575;1.38e-33;2!CL:0000244;2.38e-17;4!CL:0000731;2.38e-17;4!CL:0002623;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.64e-33,2;CL:0000244,2.59e-17,4;CL:0000731,2.59e-17,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.44e-18;1!UBERON:0008814;8.32e-10;2!UBERON:0010056;8.32e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!8.69e-15!21;UBERON:0001004!7.25e-13!72;UBERON:0003127!2.28e-11!2;UBERON:0000165!8.83e-11!28;UBERON:0000930!8.83e-11!28;UBERON:0000365!3.42e-10!5;UBERON:0001444!3.79e-09!48;UBERON:0005910!1.45e-08!6;UBERON:0000161!2.23e-08!35;UBERON:0001723!2.24e-08!3;UBERON:0001033!2.24e-08!3;UBERON:0010056!2.24e-08!3;UBERON:0000065!4.94e-08!53;UBERON:0004815!5.22e-08!3;UBERON:0002031!5.22e-08!3;UBERON:0003102!7.72e-08!95;UBERON:0004119!8.11e-08!169;UBERON:0000925!8.11e-08!169;UBERON:0006595!8.11e-08!169;UBERON:0001949!1.23e-07!3;UBERON:0000078!2.61e-07!18;UBERON:0002372!5.58e-07!1;UBERON:0001961!5.58e-07!1;UBERON:0001744!5.58e-07!1;UBERON:0001735!5.58e-07!1;UBERON:0007029!6.23e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.89e-23;3!UBERON:0001033;3.89e-23;3!UBERON:0002372;2.90e-18;1!UBERON:0001961;2.90e-18;1!UBERON:0001744;2.90e-18;1!UBERON:0001042;2.90e-18;1!UBERON:0001735;2.90e-18;1!UBERON:0007029;4.44e-18;1!UBERON:0005795;1.03e-17;1!UBERON:0000964;2.38e-17;4!UBERON:0010409;2.38e-17;4!UBERON:0000365;4.39e-14;5!UBERON:0005910;6.70e-12;6!UBERON:0000020;8.00e-12;23!UBERON:0001032;2.41e-11;24!UBERON:0004456;2.41e-11;24!UBERON:0000165;7.67e-10;28!UBERON:0007811;7.69e-10;52!UBERON:0006562;8.32e-10;2!UBERON:0000341;1.03e-09;2!UBERON:0000153;2.01e-09;54!UBERON:0000033;3.15e-09;50!UBERON:0010313;1.67e-07;10!UBERON:0001444;3.36e-07;48!UBERON:0001043;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.94e-23,3;UBERON:0001033,2.94e-23,3;UBERON:0010056,2.94e-23,3;UBERON:0002372,2.66e-18,1;UBERON:0001961,2.66e-18,1;UBERON:0001744,2.66e-18,1;UBERON:0001735,2.66e-18,1;UBERON:0007029,3.75e-18,1;UBERON:0000964,2.59e-17,4;UBERON:0010409,2.59e-17,4;UBERON:0004348,2.59e-17,4;UBERON:0005427,2.59e-17,4;UBERON:0001042,9.10e-16,10;UBERON:0009145,9.10e-16,10;UBERON:0006562,2.15e-14,11;UBERON:0000365,4.69e-14,5;UBERON:0000153,1.01e-12,62;UBERON:0007811,1.01e-12,62;UBERON:0000166,1.87e-12,22;UBERON:0001444,5.47e-12,49;UBERON:0005910,7.08e-12,6;UBERON:0000020,2.32e-11,24;UBERON:0001032,2.32e-11,24;UBERON:0004456,2.32e-11,24;UBERON:0000033,1.82e-10,56;UBERON:0000341,1.03e-09,2;UBERON:0000165,1.60e-09,29;UBERON:0000930,1.60e-09,29;UBERON:0001557,1.38e-08,19;UBERON:0003102,8.21e-08,99;UBERON:0000161,1.02e-07,36;UBERON:0010313,1.73e-07,10;UBERON:0002342,1.73e-07,10;UBERON:0005062,1.73e-07,10;UBERON:0001043,7.28e-07,3;UBERON:0009143,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,2.32773639572207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0,0,0,0,3.26575121845442,1.71116650542641,3.63701086278773,0.717222053926764,0.332660356546013,0,0,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p9@NLRX1 | |||
}} |
Revision as of 10:44, 11 January 2014
Short description: | p9@NLRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NLRX1_5end |
Coexpression cluster: | C683_esophagus_tongue_tonsil_Corneal_cervical_Esophageal_throat |
Association with transcript: | -1bp_to_ENST00000397884_5end |
EntrezGene: | NLRX1 |
HGNC: | 29890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.64e-33 | 2 |
transitional epithelial cell | 2.59e-17 | 4 |
urothelial cell | 2.59e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.94e-23 | 3 |
gustatory system | 2.94e-23 | 3 |
future tongue | 2.94e-23 | 3 |
tonsil | 2.66e-18 | 1 |
mucosa-associated lymphoid tissue | 2.66e-18 | 1 |
lymphoid tissue | 2.66e-18 | 1 |
tonsillar ring | 2.66e-18 | 1 |
surface | 3.75e-18 | 1 |
cornea | 2.59e-17 | 4 |
eye surface | 2.59e-17 | 4 |
optic eminence | 2.59e-17 | 4 |
corneal primordium | 2.59e-17 | 4 |
chordate pharynx | 9.10e-16 | 10 |
pharyngeal region of foregut | 9.10e-16 | 10 |
pharynx | 2.15e-14 | 11 |
urothelium | 4.69e-14 | 5 |
anterior region of body | 1.01e-12 | 62 |
craniocervical region | 1.01e-12 | 62 |
oral opening | 1.87e-12 | 22 |
subdivision of head | 5.47e-12 | 49 |
transitional epithelium | 7.08e-12 | 6 |
sense organ | 2.32e-11 | 24 |
sensory system | 2.32e-11 | 24 |
entire sense organ system | 2.32e-11 | 24 |
head | 1.82e-10 | 56 |
throat | 1.03e-09 | 2 |
mouth | 1.60e-09 | 29 |
stomodeum | 1.60e-09 | 29 |
upper respiratory tract | 1.38e-08 | 19 |
surface structure | 8.21e-08 | 99 |
orifice | 1.02e-07 | 36 |
neural crest-derived structure | 1.73e-07 | 10 |
neural crest | 1.73e-07 | 10 |
neural fold | 1.73e-07 | 10 |
esophagus | 7.28e-07 | 3 |
esophageal region | 7.28e-07 | 3 |