FFCP PHASE1:Hg19::chr12:31479107..31479142,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30702 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NP50 | |||
|association_with_transcript=0bp_to_ENST00000542983,NM_001135811,NM_021238_5end | |||
|coexpression_cluster_id=C3276 | |||
|description=CAGE_peak_3_at_FAM60A_5end | |||
|id=chr12:31479107..31479142,- | |||
|ontology_enrichment_celltype=CL:0000542!6.19e-17!53;CL:0000051!6.19e-17!53;CL:0000838!1.63e-16!52;CL:0000945!4.75e-13!24;CL:0000826!4.75e-13!24;CL:0000066!1.77e-12!254;CL:0000236!3.85e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.50e-13;24!CL:0000542;5.93e-10;53!CL:0000236;1.33e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.10e-17,53;CL:0000051,6.10e-17,53;CL:0000838,1.61e-16,52;CL:0000945,4.70e-13,24;CL:0000826,4.70e-13,24;CL:0000066,1.13e-12,253;CL:0000236,3.82e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.93e-10;53 | |||
|ontology_enrichment_disease=DOID:162!2.43e-32!235;DOID:14566!5.15e-32!239;DOID:0050687!1.17e-25!143;DOID:305!2.74e-24!106;DOID:0050686!2.69e-15!137;DOID:3095!4.82e-09!22;DOID:2994!4.82e-09!22;DOID:1749!4.42e-07!14;DOID:2531!7.30e-07!51;DOID:0060083!7.30e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.02e-09;22!DOID:2994;4.02e-09;22!DOID:305;5.68e-08;106!DOID:0050687;4.46e-07;143!DOID:1749;4.89e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.55e-32,235;DOID:14566,5.41e-32,239;DOID:0050687,1.25e-25,143;DOID:305,2.68e-24,106;DOID:0050686,2.92e-15,137;DOID:3095,4.78e-09,22;DOID:2994,4.78e-09,22;DOID:1749,4.40e-07,14;DOID:2531,7.26e-07,51;DOID:0060083,7.26e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@FAM60A | |||
}} |
Revision as of 12:52, 11 January 2014
Short description: | p3@FAM60A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM60A_5end |
Coexpression cluster: | C3276_testicular_oral_pancreatic_H9_migratory_small_merkel |
Association with transcript: | 0bp_to_ENST00000542983, NM_001135811, NM_021238_5end |
EntrezGene: | FAM60A |
HGNC: | 30702 |
UniProt: | Q9NP50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.10e-17 | 53 |
common lymphoid progenitor | 6.10e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.61e-16 | 52 |
lymphocyte of B lineage | 4.70e-13 | 24 |
pro-B cell | 4.70e-13 | 24 |
epithelial cell | 1.13e-12 | 253 |
B cell | 3.82e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.55e-32 | 235 |
disease of cellular proliferation | 5.41e-32 | 239 |
cell type cancer | 1.25e-25 | 143 |
carcinoma | 2.68e-24 | 106 |
organ system cancer | 2.92e-15 | 137 |
germ cell and embryonal cancer | 4.78e-09 | 22 |
germ cell cancer | 4.78e-09 | 22 |
squamous cell carcinoma | 4.40e-07 | 14 |
hematologic cancer | 7.26e-07 | 51 |
immune system cancer | 7.26e-07 | 51 |