FFCP PHASE1:Hg19::chr12:65959975..65959997,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr12:65959975..65959997,+ | |||
|id=chr12:65959975..65959997,+ | |||
|ontology_enrichment_celltype=CL:0000192!7.95e-13!42;CL:0000514!7.95e-13!42;CL:0000055!8.17e-13!180;CL:0000187!6.25e-12!54;CL:0000359!1.45e-11!32;CL:0000680!4.42e-11!57;CL:0000056!4.42e-11!57;CL:0000355!4.42e-11!57;CL:0000723!8.23e-11!436;CL:0000183!1.45e-10!59;CL:0002620!1.51e-10!23;CL:0000048!1.72e-10!430;CL:0000034!2.28e-10!444;CL:0000393!2.55e-10!60;CL:0000211!2.55e-10!60;CL:0000057!2.63e-09!75;CL:1000306!9.08e-08!4;CL:0002547!9.08e-08!4;CL:0002594!1.24e-07!4;CL:0002596!1.30e-07!2;CL:0002371!6.16e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:1000306;2.74e-29;4!CL:0002547;2.74e-29;4!CL:0002589;2.05e-15;2!CL:0002596;2.05e-15;2!CL:0000359;1.37e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.16e-29,4;CL:0002547,3.16e-29,4;CL:0002596,1.78e-15,2;CL:0002589,2.74e-15,2;CL:0000359,1.15e-08,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.70e-16!14;DOID:17!1.01e-09!5;DOID:450!1.01e-09!5;DOID:66!1.01e-09!5;DOID:423!1.01e-09!5;DOID:0080000!1.01e-09!5;DOID:11722!1.01e-09!5;DOID:120!1.13e-07!27;DOID:193!5.02e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.02e-13!42;UBERON:0003509!3.02e-13!42;UBERON:0004572!3.02e-13!42;UBERON:0001134!1.57e-11!61;UBERON:0002036!1.57e-11!61;UBERON:0003082!1.57e-11!61;UBERON:0002385!5.07e-11!63;UBERON:0001015!5.07e-11!63;UBERON:0000383!5.07e-11!63;UBERON:0001981!8.26e-11!60;UBERON:0007500!8.26e-11!60;UBERON:0004537!8.26e-11!60;UBERON:0006965!8.26e-11!60;UBERON:0004872!9.98e-11!84;UBERON:0004290!1.00e-10!70;UBERON:0000055!5.01e-10!69;UBERON:0003914!1.61e-09!118;UBERON:0004573!2.41e-09!33;UBERON:0004571!2.41e-09!33;UBERON:0000486!1.75e-08!82;UBERON:0000914!2.50e-08!83;UBERON:0002329!2.50e-08!83;UBERON:0003077!2.50e-08!83;UBERON:0003059!2.50e-08!83;UBERON:0007282!2.50e-08!83;UBERON:0009618!2.50e-08!83;UBERON:0007285!2.50e-08!83;UBERON:0002049!3.32e-08!79;UBERON:0007798!3.32e-08!79;UBERON:0000992!5.31e-08!13;UBERON:0004535!7.99e-08!110;UBERON:0000415!9.08e-08!4;UBERON:0007240!9.08e-08!4;UBERON:0005742!9.08e-08!4;UBERON:0005734!9.08e-08!4;UBERON:0004664!9.08e-08!4;UBERON:0004663!9.08e-08!4;UBERON:0001310!1.24e-07!4;UBERON:0005396!1.30e-07!2;UBERON:0001009!1.76e-07!113;UBERON:0005256!2.44e-07!143;UBERON:0002119!2.63e-07!4;UBERON:0004531!2.63e-07!4;UBERON:0000490!4.57e-07!138;UBERON:0001135!8.55e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.74e-29;4!UBERON:0000415;2.74e-29;4!UBERON:0007240;2.74e-29;4!UBERON:0005742;2.74e-29;4!UBERON:0005734;2.74e-29;4!UBERON:0004664;2.74e-29;4!UBERON:0004663;2.74e-29;4!UBERON:0004573;8.89e-21;33!UBERON:0004571;8.89e-21;33!UBERON:0001529;2.05e-15;2!UBERON:0005396;2.05e-15;2!UBERON:0007204;2.05e-15;2!UBERON:0001637;1.95e-13;42!UBERON:0003509;1.95e-13;42!UBERON:0004572;1.95e-13;42!UBERON:0000947;6.31e-13;21!UBERON:0010191;6.31e-13;21!UBERON:0002118;6.04e-07;5!UBERON:0007500;6.85e-07;56!UBERON:0001981;6.85e-07;56!UBERON:0004537;6.85e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.16e-29,4;UBERON:0007240,3.16e-29,4;UBERON:0005742,3.16e-29,4;UBERON:0005734,3.16e-29,4;UBERON:0004664,3.16e-29,4;UBERON:0004663,3.16e-29,4;UBERON:0004573,9.87e-22,33;UBERON:0004571,9.87e-22,33;UBERON:0004797,3.42e-17,7;UBERON:0001637,3.58e-17,42;UBERON:0003509,3.58e-17,42;UBERON:0004572,3.58e-17,42;UBERON:0005396,1.78e-15,2;UBERON:0001529,2.74e-15,2;UBERON:0007204,2.74e-15,2;UBERON:0000947,6.58e-13,21;UBERON:0010191,6.58e-13,21;UBERON:0007500,2.45e-12,59;UBERON:0001981,2.45e-12,59;UBERON:0004537,2.45e-12,59;UBERON:0006965,2.45e-12,59;UBERON:0000055,9.52e-11,68;UBERON:0002049,2.08e-09,78;UBERON:0007798,2.08e-09,78;UBERON:0004872,7.39e-09,83;UBERON:0002118,6.04e-07,5;UBERON:0004535,8.44e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,12.0492354540029,1.14734648299525,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0.717558542755448,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887808626565635,0.0821271560138091,0,0.464841513839837,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,1.65896526242959,0,0,2.83331112147576,0,0,0,0.869932992075073,0,1.00187420719394,0,0,0,0,0,1.27281299170375,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.811641507850816,0.30982349809975,0,0.430234056612155,0,0.7133421029625,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.453692771289717,0,0.147855149989634,0.63718706865481,0,0.155262956876259,0.414706207840855,0.797525143673985,0,0.751288044986092,0.380805212168795,0,0.363697318405119,0,0.928067519756987,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:65959975..65959997,+ | |||
}} |
Revision as of 14:25, 11 January 2014
Short description: | p@chr12:65959975..65959997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:65959975..65959997, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.16e-29 | 4 |
fibroblast of the aortic adventitia | 3.16e-29 | 4 |
smooth muscle cell of the carotid artery | 1.78e-15 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.74e-15 | 2 |
vascular associated smooth muscle cell | 1.15e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.16e-29 | 4 |
tunica adventitia of artery | 3.16e-29 | 4 |
adventitia | 3.16e-29 | 4 |
tunica adventitia of blood vessel | 3.16e-29 | 4 |
aorta tunica adventitia | 3.16e-29 | 4 |
aorta wall | 3.16e-29 | 4 |
systemic artery | 9.87e-22 | 33 |
systemic arterial system | 9.87e-22 | 33 |
blood vessel layer | 3.42e-17 | 7 |
artery | 3.58e-17 | 42 |
arterial blood vessel | 3.58e-17 | 42 |
arterial system | 3.58e-17 | 42 |
carotid artery segment | 1.78e-15 | 2 |
brachiocephalic artery | 2.74e-15 | 2 |
brachiocephalic vasculature | 2.74e-15 | 2 |
aorta | 6.58e-13 | 21 |
aortic system | 6.58e-13 | 21 |
epithelial tube open at both ends | 2.45e-12 | 59 |
blood vessel | 2.45e-12 | 59 |
blood vasculature | 2.45e-12 | 59 |
vascular cord | 2.45e-12 | 59 |
vessel | 9.52e-11 | 68 |
vasculature | 2.08e-09 | 78 |
vascular system | 2.08e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 7.39e-09 | 83 |
right ovary | 6.04e-07 | 5 |
cardiovascular system | 8.44e-07 | 109 |