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FFCP PHASE1:Hg19::chr12:133589194..133589198,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:133589194..133589198,+|id=chr12:133589194..133589198,+|ontology_enrichment_celltype=CL:0000838!2.68e-09!52;CL:0000542!7.01e-09!53;CL:0000051!7.01e-09!53|ontology_enrichment_celltype_v019=CL:0000624;1.46e-13;6!CL:0000623;8.56e-13;3!CL:0000898;1.68e-12;3!CL:0000895;5.29e-10;1!CL:0000791;5.53e-08;18!CL:0000789;5.53e-08;18!CL:0002419;5.53e-08;18|ontology_enrichment_celltype_v019_2=CL:0000624,1.08e-13,6;CL:0000623,6.58e-13,3;CL:0000825,6.58e-13,3;CL:0000898,1.68e-12,3;CL:0000810,7.55e-10,1;CL:0000895,7.55e-10,1;CL:0002436,7.55e-10,1;CL:0002427,7.55e-10,1;CL:0002428,7.55e-10,1;CL:0002429,7.55e-10,1;CL:0002433,7.55e-10,1;CL:0002431,7.55e-10,1;CL:0002432,7.55e-10,1;CL:0000791,4.92e-08,18;CL:0000789,4.92e-08,18;CL:0002420,4.92e-08,18;CL:0002419,4.92e-08,18;CL:0000790,4.92e-08,18;CL:0000838,1.59e-07,52;CL:0000542,2.28e-07,53;CL:0000051,2.28e-07,53|ontology_enrichment_development_v019=CL:0002427;5.29e-10;1!CL:0000790;5.53e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1799;5.29e-10;1!DOID:10165;5.29e-10;1!DOID:1798;5.29e-10;1|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-09,1;DOID:10165,1.07e-09,1;DOID:1798,1.07e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000029;5.29e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.40e-10,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0,0.0774672005803016,0,0.587200878669695,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0.515151135268373,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0.560508562981536,0.526768169550154,1.7703879310245,0.393010762749165,0,0.334372990781356,0,1.89379122293893,0,0,1.47302953737419,0.664601683750863,0.270803863765016,0.768547918354051,0.390178042679635,0.986627427622057,0.276350017785848,0,0.444859689486181,0.802622484269139,0,0.339928028092699,1.14966148080576,0,0.506039384039006,0.95569624297229,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.947109008176067,0,0.604820229674197,0.802320587350522,2.31719046212478,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0,0,0,0,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.756962552626885,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0,0.283550194484773,0.268675568108545,0,0,0,0.352193736052904,0.207328115540772,0,0,0.190493682876507,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0.985153801009636,1.72502059887614,2.31017465303547,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,1.03985430765404,0.356857977594324,0.315404830067869,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.767309866440312,0,0,0,0.64341568457443,0,0,0.177561725313127,0,0,0,0.241718899183244,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0,0.165284915360978,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0.714695326373367,0,0,0.540031437238115,0.79312517629427,0.106824071127473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{{FFCP
|DHSsupport=
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr12:133589194..133589198,+
|id=chr12:133589194..133589198,+
|ontology_enrichment_celltype=CL:0000838!2.68e-09!52;CL:0000542!7.01e-09!53;CL:0000051!7.01e-09!53
|ontology_enrichment_celltype_v019=CL:0000624;1.46e-13;6!CL:0000623;8.56e-13;3!CL:0000898;1.68e-12;3!CL:0000895;5.29e-10;1!CL:0000791;5.53e-08;18!CL:0000789;5.53e-08;18!CL:0002419;5.53e-08;18
|ontology_enrichment_celltype_v019_2=CL:0000624,1.08e-13,6;CL:0000623,6.58e-13,3;CL:0000825,6.58e-13,3;CL:0000898,1.68e-12,3;CL:0000810,7.55e-10,1;CL:0000895,7.55e-10,1;CL:0002436,7.55e-10,1;CL:0002427,7.55e-10,1;CL:0002428,7.55e-10,1;CL:0002429,7.55e-10,1;CL:0002433,7.55e-10,1;CL:0002431,7.55e-10,1;CL:0002432,7.55e-10,1;CL:0000791,4.92e-08,18;CL:0000789,4.92e-08,18;CL:0002420,4.92e-08,18;CL:0002419,4.92e-08,18;CL:0000790,4.92e-08,18;CL:0000838,1.59e-07,52;CL:0000542,2.28e-07,53;CL:0000051,2.28e-07,53
|ontology_enrichment_development_v019=CL:0002427;5.29e-10;1!CL:0000790;5.53e-08;18
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:1799;5.29e-10;1!DOID:10165;5.29e-10;1!DOID:1798;5.29e-10;1
|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-09,1;DOID:10165,1.07e-09,1;DOID:1798,1.07e-09,1
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0000029;5.29e-10;1
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.40e-10,1
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|short_description=p@chr12:133589194..133589198,+
}}

Revision as of 16:50, 11 January 2014

Short description:p@chr12:133589194..133589198, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:133589194..133589198, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data