FFCP PHASE1:Hg19::chr17:79935418..79935431,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79058 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13825 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZE9 | |||
|association_with_transcript=0bp_to_ENST00000306739,NM_001251888,NM_024083,NR_045351,uc002kcw.1,uc002kcx.2,uc002kcy.2,uc002kcz.2,uc002kda.2_5end | |||
|description=CAGE_peak_2_at_ASPSCR1_5end | |||
|id=chr17:79935418..79935431,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.36e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.93e-07;17!CL:0002518;2.93e-07;17!CL:1000507;5.46e-07;10!CL:1000494;5.46e-07;10!CL:1000449;6.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-10,253;CL:1000497,3.18e-07,17;CL:0002518,3.18e-07,17;CL:1000449,8.61e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.27e-23!239;DOID:162!4.55e-23!235;DOID:0050687!5.15e-16!143;DOID:305!5.32e-13!106;DOID:0050686!7.60e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.15e-09,106;DOID:0050687,1.21e-08,143;DOID:162,4.90e-08,235;DOID:14566,1.41e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000072!1.45e-07!46;UBERON:0001737!5.95e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.73e-14;9!UBERON:0001557;3.73e-14;9!UBERON:0004211;5.46e-07;10!UBERON:0009773;5.46e-07;10!UBERON:0001231;5.46e-07;10!UBERON:0004810;5.46e-07;10!UBERON:0006555;6.66e-07;15!UBERON:0004819;6.66e-07;15!UBERON:0001285;6.66e-07;15!UBERON:0007684;6.66e-07;15!UBERON:0002113;7.26e-07;24!UBERON:0011143;7.26e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.02e-14,9;UBERON:0001557,7.66e-10,19;UBERON:0004211,8.61e-07,15;UBERON:0009773,8.61e-07,15;UBERON:0001231,8.61e-07,15;UBERON:0001285,8.61e-07,15;UBERON:0007684,8.61e-07,15;UBERON:0004208,8.61e-07,15 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0,1.39560233594486,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0,0.626909442956176,0.572471974262113,0.136874425072884,0.376627918784408,0.305653622991805,0.738905305049512,0.550975469195755,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0.739508020333575,1.39440961044543,0.142169232487422,1.76160263600908,0.553995408531877,0,0.434021741431704,0.447830948479849,0.32389366601898,0,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.32145117339416,0,0.19891667719909,0.365328307529268,1.75996244461323,0,0.889509253863555,0.426730222566507,0.800791974072025,0,1.98313461835459,0,0,0,0.382273228125229,1.32171328579026,0,0.526768169550154,0,0,0,1.00311897234407,0.651844533267181,1.4203434172042,0,0.222820913770347,0.589211814949674,0,0.541607727530031,0.768547918354051,0.910415432919148,0.657751618414705,0.276350017785848,0,0.593146252648242,0.267540828089713,2.09071047609954,0.679856056185397,1.14966148080576,0,0,0.95569624297229,0,1.90090408889675,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0.383587685530591,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0.567208902984407,1.10864698731282,0.43917392846563,1.57174890597255,0.364295288292542,0.370784442784429,0,0.174129737299267,0.797747763113191,0.476981248610684,0,0,1.39133685156694,1.72046919021225,0,0.56530794192401,0,0.550236083880135,0.626984899610432,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0,0.900891843866578,3.06633274931766,1.89853131913626,1.09921046358244,0,0,0,0,0.379891534993739,0.794455084879313,0,0.709336764396714,0,1.06748995729705,0,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.597794722207204,0,0.161872944368132,0,0.408308342509787,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0,0.877955241761676,0.30648779579902,0,0.453728732640084,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.506328996723799,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0.573609190778008,0.121973706129595,0.397589304964456,0.464775771478074,0.414644220061482,1.26160425437814,0.72995471815166,0,1.28648187638577,1.38134921352481,0,1.44375896333917,2.48444280083672,2.19160097101532,1.68707720918437,1.65440959098591,2.17879444092406,1.42362371466658,2.56179485504312,1.37355025587742,2.30848294167834,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0.245976877086227,1.02940686179115,0,1.1240175325762,0.301586917234893,0.462942225792648,0.651616610620649,0,0,0.579652024875384,0,0.288732895522148,0.462985512576611,0.761016608938393,3.1608175918371,1.71697232418975,0,0.936017060556951,0.445893486866185,0,0,0.141775097242386,0.0895585227028483,0,1.53353071666084,0,0.264145302039678,0,0.288239906833923,0.6312121671319,0.825472625798197,1.14596527667483,1.17217447210047,1.71072446022705,0.514137463516618,1.50171528921959,0.285826432630578,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0.542621605391443,1.64648067356154,0,0.355391948742546,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0,0.179060963239896,1.12085143993527,0.197030760201927,0.215627574859517,0,0.508189248444927,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,0.713715955188647,0,0.117141414992713,0.601892199455438,2.27407504055985,1.03473071292505,0,0.553107505625109,0.347534457872331,0,0.343143423810856,0,0,0.213455115606889,0.606255142892519,0,0.30239029332968,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0.308419387605311,0.887808626565635,0.164254312027618,0,0.232420756919918,0.846016147141356,0.200506470303285,0.644566922551274,0.34444334449382,0,0.524497659837696,0,0.462092022626489,1.56869953835371,2.92278449306521,0.316654886678627,0,0,0.431831832204279,1.54227252690289,1.08378575017541,1.00337954770971,1.52925763827023,2.49322802678617,1.11937377361089,0.219259876645935,0,1.02580050046556,0,0.650756789328606,0.721287081534056,1.37354197227515,1.40266149865,0,0,0,0.580024309752732,0,0.307007349452259,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0.178064071293475,0.330569830721956,0.384380134730212,0.638063562472921,0.6069466851333,0,0,1.3940745403212,0.308033580176089,1.06461206063404,0,0.55597265731176,0.286249773483982,0,0,0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| |||
|short_description=p2@ASPSCR1 | |||
}} |
Revision as of 18:05, 20 January 2014
Short description: | p2@ASPSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ASPSCR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306739, NM_001251888, NM_024083, NR_045351, uc002kcw.1, uc002kcx.2, uc002kcy.2, uc002kcz.2, uc002kda.2_5end |
EntrezGene: | ASPSCR1 |
HGNC: | 13825 |
UniProt: | Q9BZE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-10 | 253 |
kidney cell | 3.18e-07 | 17 |
kidney epithelial cell | 3.18e-07 | 17 |
epithelial cell of nephron | 8.61e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.02e-14 | 9 |
upper respiratory tract | 7.66e-10 | 19 |
nephron epithelium | 8.61e-07 | 15 |
renal tubule | 8.61e-07 | 15 |
nephron tubule | 8.61e-07 | 15 |
nephron | 8.61e-07 | 15 |
uriniferous tubule | 8.61e-07 | 15 |
nephrogenic mesenchyme | 8.61e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.15e-09 | 106 |
cell type cancer | 1.21e-08 | 143 |
cancer | 4.90e-08 | 235 |
disease of cellular proliferation | 1.41e-07 | 239 |