FFCP PHASE1:Hg19::chr4:1857954..1857971,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6556 | |||
|TSSclassifier=strong | |||
|UniProt=O95202 | |||
|association_with_transcript=2bp_to_ENST00000302787,NM_012318,uc003gdv.2,uc011bvg.1_5end | |||
|description=CAGE_peak_2_at_LETM1_5end | |||
|id=chr4:1857954..1857971,- | |||
|ontology_enrichment_celltype=CL:0002139!2.69e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.69e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.83e-09,24;CL:0000071,7.54e-07,18;CL:0002546,7.54e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.89e-10!79;UBERON:0007798!2.89e-10!79;UBERON:0000055!3.02e-09!69;UBERON:0004535!3.73e-08!110;UBERON:0001009!6.57e-08!113;UBERON:0001981!6.42e-07!60;UBERON:0007500!6.42e-07!60;UBERON:0004537!6.42e-07!60;UBERON:0006965!6.42e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.60e-08,68;UBERON:0002049,8.58e-08,78;UBERON:0007798,8.58e-08,78;UBERON:0004638,7.54e-07,18;UBERON:0001986,7.54e-07,18;UBERON:0004852,7.54e-07,18 | |||
|phase1_expression=0.908391896352783,0.428201047781966,1.55049844505568,1.0007329835313,0.446961094427288,0,0,0,1.30592814099919,0.245733936501509,0,0.218441372130172,0.527533956456907,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.61560529038394,1.22400414746552,0.313454721478088,0.85870796139317,0.547497700291537,1.00434111675842,0.229240217243854,0.328402357799783,0.157421562627358,0,0,1.23852898652861,0,0,0.369754010166788,0.697204805222715,0.284338464974843,0.880801318004542,2.76997704265939,0.601633342410425,1.73608696572681,0.447830948479849,0.32389366601898,0,1.01778767145695,0.755751887377619,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0,0,1.13477044938228,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0,0,0.633765858935825,0,1.04829322754188,0.112328631146495,0.300353785683013,0.32145117339416,2.28010194992999,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,2.27685187643779,0.587237189370939,0.382273228125229,1.32171328579026,0,0.526768169550154,0.196709770113833,0.786021525498329,0.205601498999509,0.501559486172034,0.32592226663359,0,0,0.779873198196215,0.294605907474837,0.443067789167242,0.541607727530031,0.896639238079726,0.780356085359269,0.493313713811028,0.829050053357545,0.289803085735052,0.296573126324121,0.267540828089713,0,0.453237370790265,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,1.30216690771284,0,0.451725357233318,0.511946444617674,0,0,0,1.00803371612366,0,1.01377082717959,0,0,0.255725123687061,1.0843174571537,1.00267582127178,1.30361867064741,0,1.94653948121054,0.850813354476611,1.10864698731282,0.790513071238134,1.37528029272598,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,3.33886874027479,2.28797964312051,2.22874500797739,1.98762407366705,0.860234595106124,0.347140501607594,1.69592382577203,1.67799774483962,1.92582629358047,2.29894463190492,1.29208379584664,1.06729878806013,0.66944122552934,0.402829317109147,1.52054421143703,0.732186172644509,0.735326160691737,0.81014194788176,1.16089646769304,0.44905874525234,0.337834441449967,3.06633274931766,2.84779697870439,1.64881569537367,0,0,0,0.993943903390637,1.01304409331664,0.662045904066094,1.43418310374407,0.709336764396714,0,1.06748995729705,0.74000264525148,0.933633106199299,0.808264032418128,0.980771418680752,0.454072282934794,0.576175924479999,0.70296429550139,0.312160076830321,0,1.79338416662161,0.704606991862589,1.29498355494505,0.98315564691574,0.204154171254893,0.368502951935304,0.619954687054593,0,1.7308685049499,0.910161361938026,1.43723628363248,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.751190294532984,0.680593098960126,0.538168907066586,0.640672166455702,0.847727604638247,0.600182192168805,0.824420233907511,0.257640540045629,1.11670113798954,0.506328996723799,0.584622030967192,0.252433774244115,0.736399189138395,0,1.06502877754984,0.604512589365842,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0.365921118388786,0,0.232387885739037,0,0.756962552626885,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0.882926198829301,0.245976877086227,0.857839051492628,0.658501712451753,1.1240175325762,0,0,1.3032332212413,0,0,0.231860809950154,0.70445216541493,1.15493158208859,0.925971025153221,1.33177906564219,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0,0.503946384596579,0,0.358234090811393,0,0.383382679165211,0,0.528290604079356,0.829312462163088,1.44119953416961,1.00993946741104,1.20645999155121,0.763976851116555,2.34434894420094,1.71072446022705,0.719792448923265,0.300343057843917,0.571652865261156,0.560655421726804,0.43596006883328,0.80672114403045,0.517086863031111,0,0.845302752556,0.26593811658487,0,1.28603687131071,0,1.3321108950805,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.399891964728228,1.2162378064119,0,0,0,0,1.42636905040718,0.579125226670317,0.821905290201534,0.895304816199478,0,0.788123040807709,0.862510299438069,1.54011643535698,0.508189248444927,1.30139853857622,2.31986643833309,1.67516265334349,1.91381625495949,0,0,0,0.858840442033979,0.500170521059677,0,0.831883446123229,0.713715955188647,0.315404830067869,0.585707074963566,1.20378439891088,0,0,0.664225598535437,0.368738337083406,1.12948698808508,0.783204629850962,1.02943027143257,0.82707210449155,0.647142602455851,0.106727557803444,0,0,0.30239029332968,0.744323423456331,0.767309866440312,0.841980283299221,0.384417447767103,0,0.965123526861645,0,0.308419387605311,0.177561725313127,0.574890092096664,1.03850885836724,0.348631135379878,0,0.40101294060657,0.644566922551274,1.03333003348146,0.182091168006717,0.786746489756545,0.451199612907412,0.231046011313244,0.784349769176855,0,0.422206515571503,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| |||
|short_description=p2@LETM1 | |||
}} |
Revision as of 23:50, 21 January 2014
Short description: | p2@LETM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LETM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000302787, NM_012318, uc003gdv.2, uc011bvg.1_5end |
EntrezGene: | LETM1 |
HGNC: | 6556 |
UniProt: | O95202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.83e-09 | 24 |
blood vessel endothelial cell | 7.54e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.54e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.60e-08 | 68 |
vasculature | 8.58e-08 | 78 |
vascular system | 8.58e-08 | 78 |
blood vessel endothelium | 7.54e-07 | 18 |
endothelium | 7.54e-07 | 18 |
cardiovascular system endothelium | 7.54e-07 | 18 |