FFCP PHASE1:Hg19::chr5:172385601..172385607,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=100268168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=170bp_to_NR_026683,uc011dfb.1_5end | |||
|description=CAGE_peak_2_at_LOC100268168_5end | |||
|id=chr5:172385601..172385607,- | |||
|ontology_enrichment_celltype=CL:0000012!1.36e-10!682;CL:0000066!2.44e-10!254;CL:0000548!1.63e-09!679;CL:0000004!1.63e-09!679;CL:0000255!1.63e-09!679;CL:0000063!1.17e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0002202;6.47e-09;9!CL:0002632;6.47e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.81e-09,58;CL:0002202,4.74e-09,9;CL:0002632,4.74e-09,9;CL:0002076,1.21e-08,42;CL:0000066,5.88e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.87e-24!143;DOID:305!2.47e-23!106;DOID:162!7.84e-23!235;DOID:14566!3.07e-22!239;DOID:0050686!1.18e-08!137;DOID:1749!1.73e-07!14;DOID:299!3.80e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.39e-15;14!DOID:3908;1.76e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.02e-16,143;DOID:1749,4.56e-15,14;DOID:305,3.61e-14,106;DOID:162,5.16e-13,235;DOID:14566,1.81e-12,239;DOID:3908,8.70e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000485;2.55e-08;7 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@LOC100268168 | |||
}} |
Revision as of 09:07, 22 January 2014
Short description: | p2@LOC100268168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100268168_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_NR_026683, uc011dfb.1_5end |
EntrezGene: | LOC100268168 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.81e-09 | 58 |
epithelial cell of tracheobronchial tree | 4.74e-09 | 9 |
epithelial cell of lower respiratory tract | 4.74e-09 | 9 |
endo-epithelial cell | 1.21e-08 | 42 |
epithelial cell | 5.88e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.02e-16 | 143 |
squamous cell carcinoma | 4.56e-15 | 14 |
carcinoma | 3.61e-14 | 106 |
cancer | 5.16e-13 | 235 |
disease of cellular proliferation | 1.81e-12 | 239 |
non-small cell lung carcinoma | 8.70e-08 | 5 |