FFCP PHASE1:Hg19::chr6:21594252..21594285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11200 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=181bp_to_ENST00000543472_5end | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_11_at_SOX4_5end | |||
|id=chr6:21594252..21594285,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.15e-14!254;CL:0000047!7.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.79e-11;6!CL:0000404;3.79e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.82e-16,8;CL:0000540,2.30e-11,6;CL:0000031,2.30e-11,6;CL:0000404,2.30e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.79e-11;6 | |||
|ontology_enrichment_disease=DOID:162!5.17e-14!235;DOID:14566!9.95e-14!239;DOID:0050687!2.80e-11!143;DOID:305!1.53e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.41e-09;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0,0,0,0,0.791300934685361,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0.547497700291537,0.502170558379211,0.382067028739756,0.328402357799783,0.472264687882075,0,0,0.309632246632152,0,0.30120591877825,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,1.29096936716765,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0,0,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,0.0945348171640679,1.10864698731282,0.790513071238134,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.398873881556595,0.476981248610684,0.571994910780128,1.11437250398869,0,0.860234595106124,0,0,0,0.550236083880135,0,0.775250277507987,0.71153252537342,1.33888245105868,2.41697590265488,1.52054421143703,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0.673588117878509,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0.25326102332916,0,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0.635795703478686,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,1.46368447355514,0.265059536642971,1.2781333715647,0.829288440122964,1.7662459561294,0.36497735907583,0,0,0,0,0,0.473227200159376,1.34867752062481,1.20505514941741,0.772057809126758,1.52515610864684,0.71181185733329,0.943819157121151,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,2.6487785964879,0.614942192715568,0.171567810298526,0.658501712451753,0,0.201057944823262,0.462942225792648,0,0,2.88662684050547,0.579652024875384,0,1.01056513432752,0.925971025153221,1.52203321787679,3.1608175918371,2.57545848628462,0,0.702012795417713,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0,0,0.571652865261156,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,2.03275699377971,15.6167824629146,35.571285387774,16.9191427987692,37.6383863475366,0,0,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0.647142602455851,0,0,0,0,0.744323423456331,0.306923946576125,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0.483437798366489,1.60405176242628,0.460404944679482,0,0,0.786746489756545,1.35359883872224,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,2.19766715564024,1.48517099857058,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0.576570202095319,0.127612712494584,0.6069466851333,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,2.15252686335615,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,1.298422916788,0.995985806877798,1.59426272728822,0.997896857164083,0,1.48171507906718,1.62310970137278,0.280797178113459,2.05411211129873,0,0,0.677167111206413,0.802940375518498,0.605399121573143,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0.561421621224659,0,2.79129200023881,0.111443384277478,1.13654458722565,0,0.296964680832639,0,0,0,0.111308705022906,0,0.63337622438398,0,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,1.25314822272926,0,0,0,0,0,0,5.98841394003583,0.7812832832557,0.174919999992391,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0.874813840149763,1.04174996959975,0,0,0,0.221158519862449,0.591095237907095,0,0.762569244632931,0.697118721393016,0.230850775511391,2.73460934032803,0.46112780877612,0.807818799687949,0.434589487688032,0.638002319463839,0.824378340616761,1.06606955203727,2.04386596391473,0.156980256395025,0.166211681900156,0,0,0,0,0.317873157960757,0.210998064528027,0.326465616318295,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.247127877893006,0.417687798021821,0.134802265961354,0,0,1.094728735294,0.391329237864179,0,0,0,20.5068750292428,0.063186579628488,0,1.7626992537532,1.32930774541437,0,0,0,0.284609546029793,1.66409607615766,0.520679215005393,0.195984794828755,0.261177619741208,0.17472666824203,0,0.387025325156341,0.365446585430928,0.0821154570532092,0,0,0.677942222341597,0,0,0,0.782205530939212,0.64127056201227,0.640358984218058,1.79828648623917,0.72045208577053,1.83258553865465,0.514784993585894,0,0,0.471388069233591,0.271808412147228,0.418411385249333,0.713987523454252,0,0,0,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.78741985211799,0.0846733320657845,0,0.136203406111576,0.643012593860077,1.65047323916681,2.9080823662043,0,0,0,0.335434687599266,0.0788057072991982,0.367182116944987,0,3.22717210799121,0,0.714695326373367,0,0.76280561296425,0.542999601753713,0,0.979762080328227,0,0,0.681552087141687,0.226624183040251,0,1.32506888912221,0,0,0,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0,0.124192805882767,0.553394539744923,0.499921631848426,0,0,0.235265819698172,0.936669811613763,1.30428925749743,0.447764408660622,0.701139929541673,0,0.378806010550178,0,0.889811221596536,0,0,0.621748802331122,0.591420599958536,0.477890301491107,1.79921244865442,0.776314784381297,0,0,0,0.450772826991655,0.761610424337591,0.406870733204662,0.181848659202559,0.107410557042488,0,1.19428766609585,0,0.343395705182793,0.673498977531838,0,0.192619830407303,0,0.260994291965212,2.04035332961045,1.15761237161917,0.244736704506468,0.71635536432595,0.926404341482917,1.31570429747224,0.176689145945881,0,0.168942440653073,0.76872455576384,0,0.911579868532147,0,0.194860308839388,0.265729680626726,0.163565394255844,0.327609848846413,0.737318726261158,0.211312123358627,0.59996218756479,0,0,0,0,0.559518030877778,0.622077260032973,0.127894371303652,0.431299245586727,0.471797825567689,0.764467467344097,0.169732529954025,0.637724760305049,0.123935764259002,0,0,1.26178792002005,0,1.41070377476274,0.3062454773532,0,0,0,0,29.2403167617193,0.0691572524642179,0,0,0,0,0.366857197043358,0.115525666150338,0.381382095467167,0,0.198916222116275,0.225630985047772,0.20170506870352,0,0.523813388962845,0,0.295712172434091,0,0,0,0.0634158101939068,24.6138664058199,0,0,1.40696995487696,0.511049710558381,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0.444925607568277,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0.632054446930906,0,0.869291361512897,1.60342272946051,0.207216164163037,0.6828739083758,0,0,0,0,0,0.4582137370881,0.31020638566432,1.91107787795487,0.223710863595585,0.490751168076215,0.731507549893617,0,0.102662806856247,2.3196288626764,2.91426595835484,0.935757853848423,2.78531085225916,0.713520544665411,2.823652050974,0.219881033490858,0.905777061400041,0,0,3.76253837089218,0,1.88541237681301,0,0,1.2679671827502,0.169927114687817,0,0.257831551894309,0.0999411559249289,0.357107877211315,0.705789743431384,0.401206833445841,0,0.458729283404541,0,0.631086248772738,0,12.2178193295306,1.0580536810308,0.371995018166751,0.462175628631418,0,0.252332849670158,0.546327859818478,0.380095503034311,1.73381010561369,0.26721740526556,0.643264296743914,2.005660314339,0.151557396436479,0.535928260312357,0,0,0,1.42838658878244,0.839655827868079,0.931120714437869,0.224263725161227,0.0636471582781649,0.606351566874658,0.217716747896961,0.342233301085281,0.0673520530145875,0.358611026963382,0,0.89543595472072,0.213454691755431,0,0.269475606319761,0,0.488965776731466,0,0,0.603821380773079,0 | |||
|short_description=p11@SOX4 | |||
}} |
Revision as of 10:24, 22 January 2014
Short description: | p11@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SOX4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 181bp_to_ENST00000543472_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.82e-16 | 8 |
neuron | 2.30e-11 | 6 |
neuroblast | 2.30e-11 | 6 |
electrically signaling cell | 2.30e-11 | 6 |