FFCP PHASE1:Hg19::chr6:41010200..41010223,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21256 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TGU0 | |||
|association_with_transcript=-13bp_to_NM_001010873,uc003opj.2,uc003opk.2_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_TSPO2_5end | |||
|id=chr6:41010200..41010223,+ | |||
|ontology_enrichment_celltype=CL:0000764!8.82e-51!2;CL:0000765!8.82e-51!2;CL:0000050!8.82e-51!2;CL:0000038!8.82e-51!2;CL:0000558!8.82e-51!2;CL:0000547!8.82e-51!2;CL:0000549!8.82e-51!2;CL:0000550!8.82e-51!2;CL:0000552!8.82e-51!2;CL:0000149!1.59e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.61e-131;2!CL:0000558;4.61e-131;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.61e-131,2;CL:0000765,4.61e-131,2;CL:0000050,4.61e-131,2;CL:0000038,4.61e-131,2;CL:0000558,4.61e-131,2;CL:0000547,4.61e-131,2;CL:0000549,4.61e-131,2;CL:0000550,4.61e-131,2;CL:0000552,4.61e-131,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.63e-07;11 | |||
|ontology_enrichment_disease=DOID:8552!9.79e-26!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.21e-13!2;UBERON:0002106!1.41e-09!3;UBERON:0004854!1.41e-09!3;UBERON:0009034!1.41e-09!3;UBERON:0002095!1.41e-09!3;UBERON:0004782!1.41e-09!3;UBERON:0003281!1.41e-09!3;UBERON:0009664!1.41e-09!3;UBERON:0002296!1.41e-09!3;UBERON:0005602!1.41e-09!3;UBERON:0001179!1.41e-09!3;UBERON:0006293!1.41e-09!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2785530921723,17.7776106696932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@TSPO2 | |||
}} |
Revision as of 11:50, 22 January 2014
Short description: | p1@TSPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPO2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -13bp_to_NM_001010873, uc003opj.2, uc003opk.2_5end |
EntrezGene: | TSPO2 |
HGNC: | 21256 |
UniProt: | Q5TGU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.61e-131 | 2 |
erythroblast | 4.61e-131 | 2 |
megakaryocyte-erythroid progenitor cell | 4.61e-131 | 2 |
erythroid progenitor cell | 4.61e-131 | 2 |
reticulocyte | 4.61e-131 | 2 |
proerythroblast | 4.61e-131 | 2 |
basophilic erythroblast | 4.61e-131 | 2 |
polychromatophilic erythroblast | 4.61e-131 | 2 |
orthochromatic erythroblast | 4.61e-131 | 2 |