FFCP PHASE1:Hg19::chr9:36400542..36400577,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0F5 | |||
|association_with_transcript=-246bp_to_ENST00000353739,NM_022781,NM_194329,uc003zzh.2,uc003zzi.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_15_at_RNF38_5end | |||
|id=chr9:36400542..36400577,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;9.11e-07;3!CL:1000428;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.70e-07,3;CL:1000428,7.70e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.57e-09;2!UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.03e-17;1!UBERON:0003135;2.46e-14;11!UBERON:0000473;1.99e-09;8!UBERON:0003101;1.85e-07;22!UBERON:0000079;1.85e-07;22!UBERON:0000412;9.11e-07;3!UBERON:0001992;9.11e-07;3!UBERON:0006947;9.11e-07;3!UBERON:0004054;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.44e-17,1;UBERON:0003135,2.69e-14,11;UBERON:0000473,1.99e-09,8;UBERON:0000076,3.70e-09,8;UBERON:0003101,1.94e-07,22;UBERON:0000079,1.94e-07,22;UBERON:0000412,7.70e-07,3;UBERON:0001992,7.70e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.410623275218653,0.502170558379211,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,3.99486180268024,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,2.1349799145941,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,1.15014803749563,0.985326475791887,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0.276242966807689,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,2.81974010175699,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.20453736500431,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.331737779793674,0,0,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0,0.217294743844016,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,1.04836000945218,0,0.0967563312890851,0,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0.458146384663663,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.236349546921671,0,0.0674035438541849,0,0,0.795229689809303,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0,0,0,0.207471757392654,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0.682986574053893,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0.471353094203252,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.0918948995348449,0,9.85123076837112,9.37874455546625,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |||
|short_description=p15@RNF38 | |||
}} |
Revision as of 01:28, 23 January 2014
Short description: | p15@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RNF38_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -246bp_to_ENST00000353739, NM_022781, NM_194329, uc003zzh.2, uc003zzi.2_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | Q9H0F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.70e-07 | 3 |
stem cell of epidermis | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.44e-17 | 1 |
male reproductive organ | 2.69e-14 | 11 |
testis | 1.99e-09 | 8 |
external ectoderm | 3.70e-09 | 8 |
male organism | 1.94e-07 | 22 |
male reproductive system | 1.94e-07 | 22 |
dermal papilla | 7.70e-07 | 3 |
papillary layer of dermis | 7.70e-07 | 3 |