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{{UBERON
{{UBERON
|id=UBERON:0004875
|alt_id=
|name=nephrogenic cord
|namespace=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
|is_a=UBERON:0005423
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|comment=part_of or develops_from urogenital ridge?
|comment=part_of or develops_from urogenital ridge?
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0004876
|develops_from=UBERON:0004876
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004875
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=nephrogenic cord
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922
|part_of=UBERON:0000922
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|union_of=
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
}}
}}

Revision as of 11:32, 12 September 2014

Name:nephrogenic cord
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
4.54e-44FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:75559819..75559830, +
4.54e-44FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_2c808356ccd804cd36d69a04f78b05bep@chr3:65253465..65253475, +
4.54e-44FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:62775330..62775347, -
4.54e-44FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:148625223..148625234, +
4.54e-44FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_2c808356ccd804cd36d69a04f78b05bep3@Wdr25
4.54e-44FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:43367743..43367754, -
4.54e-44FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_2c808356ccd804cd36d69a04f78b05bep@chr6:118298429..118298448, +
4.54e-44FFCP PHASE1:Mm9::chr16:23308115..23308126,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:23308115..23308126, +
4.54e-44FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_2c808356ccd804cd36d69a04f78b05bep@chr14:67453354..67453365, -
4.54e-44FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:101959282..101959299, -
4.54e-44FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_2c808356ccd804cd36d69a04f78b05bep4@Ido1
4.54e-44FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_2c808356ccd804cd36d69a04f78b05bep2@Gm6792
4.54e-44FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_2c808356ccd804cd36d69a04f78b05bep@chr7:151927980..151927988, +
4.54e-44FFCP PHASE1:Mm9::chr5:120078716..120078763,-#_2c808356ccd804cd36d69a04f78b05bep@chr5:120078716..120078763, -
4.54e-44FFCP PHASE2:Mm9::chr2:158083973..158083982,+#_2c808356ccd804cd36d69a04f78b05bep3@Bpi
4.54e-44FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_2c808356ccd804cd36d69a04f78b05bep@chr3:103650730..103650741, +
4.54e-44FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:43367743..43367754, -
4.54e-44FFCP PHASE2:Mm9::chr15:75304916..75304925,+#_2c808356ccd804cd36d69a04f78b05bep@chr15:75304916..75304925, +
4.54e-44FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:56469136..56469145, -
4.54e-44FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379972..31379981, +
4.54e-44FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:25677632..25677636, -
4.54e-44FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:19142604..19142612, +
4.54e-44FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_2c808356ccd804cd36d69a04f78b05bep@chr17:24670830..24670845, +
4.54e-44FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:10488683..10488691, +
4.54e-44FFCP PHASE1:Mm9::chrX:20422498..20422506,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:20422498..20422506, +
4.54e-44FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_2c808356ccd804cd36d69a04f78b05bep1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_2c808356ccd804cd36d69a04f78b05bep@chr7:65995799..65995810, -
4.54e-44FFCP PHASE1:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:164479326..164479336, +
4.54e-44FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:72756032..72756041, -
4.54e-44FFCP PHASE2:Mm9::chr11:105798218..105798228,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:105798218..105798228, -
4.54e-44FFCP PHASE1:Mm9::chr5:110773795..110773801,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:110773795..110773801, +
4.54e-44FFCP PHASE2:Mm9::chrX:75798114..75798125,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798114..75798125, -
4.54e-44FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_2c808356ccd804cd36d69a04f78b05bep@chr18:74784728..74784738, +
4.54e-44FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:147624258..147624285, -
4.54e-44FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_2c808356ccd804cd36d69a04f78b05bep5@Med24
4.54e-44FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_2c808356ccd804cd36d69a04f78b05bep3@uc007mmw.1
4.54e-44FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141429..19141440, +
4.54e-44FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379377..31379384, +
4.54e-44FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_2c808356ccd804cd36d69a04f78b05bep2@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379261..21379264, -
4.54e-44FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597725..89597743, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378774..21378782, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379437..31379448, +
4.54e-44FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:160347529..160347538, +
4.54e-44FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_2c808356ccd804cd36d69a04f78b05bep4@Ido1
4.54e-44FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155722..90155743, +
4.54e-44FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:63779573..63779582, +
4.54e-44FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_2c808356ccd804cd36d69a04f78b05bep@chr10:91753336..91753348, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379125..21379144, -
4.54e-44FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:65941913..65941923, -
4.54e-44FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26688157..26688159, -
4.54e-44FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:63611303..63611312, +
4.54e-44FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_2c808356ccd804cd36d69a04f78b05bep@chr4:106731469..106731481, -
4.54e-44FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:164479326..164479336, +
4.54e-44FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:160573108..160573123, +
4.54e-44FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:52712744..52712754, +
4.54e-44FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798114..75798125, -
4.54e-44FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155698178..155698191, -
4.54e-44FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_2c808356ccd804cd36d69a04f78b05bep1@Defb44-ps
4.54e-44FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:96150839..96150842, -
4.54e-44FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:20219008..20219045, +
4.54e-44FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_2c808356ccd804cd36d69a04f78b05bep3@Glb1l2

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