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{{UBERON
{{UBERON
|id=UBERON:0011158
|alt_id=
|name=primary subdivision of skull
|namespace=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|xref=FMA:54964
|is_a=UBERON:0000075
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The skull can be divided into two: the neurocranium and the facial skeleton" []
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011158
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=primary subdivision of skull
|namespace=
|obo_creation_date=
|part_of=UBERON:0003129
|part_of=UBERON:0003129
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="skull subdivision" EXACT [FMA:54964];;"subdivision of skull" EXACT [FMA:54964]
|union_of=
|xref=FMA:54964
}}
}}

Revision as of 11:51, 12 September 2014

Name:primary subdivision of skull
Definition:"The skull can be divided into two: the neurocranium and the facial skeleton" []
Xrefs:
links:
FMA:54964
Synonyms: "skull subdivision" EXACT [FMA:54964]
"subdivision of skull" EXACT [FMA:54964]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)
part_of:UBERON:0003129(skull)



Children

is a:UBERON:0001703 (neurocranium),UBERON:0011156 (facial skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011158 (primary subdivision of skull), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_e3d22b2f1308549011ceff08869d1682p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_e3d22b2f1308549011ceff08869d1682p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_e3d22b2f1308549011ceff08869d1682p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_e3d22b2f1308549011ceff08869d1682p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_e3d22b2f1308549011ceff08869d1682p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_e3d22b2f1308549011ceff08869d1682p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_e3d22b2f1308549011ceff08869d1682p2@Otof
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_e3d22b2f1308549011ceff08869d1682p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_e3d22b2f1308549011ceff08869d1682p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_e3d22b2f1308549011ceff08869d1682p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_e3d22b2f1308549011ceff08869d1682p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_e3d22b2f1308549011ceff08869d1682p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_e3d22b2f1308549011ceff08869d1682p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_e3d22b2f1308549011ceff08869d1682p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_e3d22b2f1308549011ceff08869d1682p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_e3d22b2f1308549011ceff08869d1682p3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_e3d22b2f1308549011ceff08869d1682p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_e3d22b2f1308549011ceff08869d1682p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_e3d22b2f1308549011ceff08869d1682p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_e3d22b2f1308549011ceff08869d1682p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_e3d22b2f1308549011ceff08869d1682p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_e3d22b2f1308549011ceff08869d1682p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_e3d22b2f1308549011ceff08869d1682p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_e3d22b2f1308549011ceff08869d1682p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_e3d22b2f1308549011ceff08869d1682p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_e3d22b2f1308549011ceff08869d1682p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_e3d22b2f1308549011ceff08869d1682p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_e3d22b2f1308549011ceff08869d1682p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_e3d22b2f1308549011ceff08869d1682p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_e3d22b2f1308549011ceff08869d1682p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_e3d22b2f1308549011ceff08869d1682p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_e3d22b2f1308549011ceff08869d1682p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_e3d22b2f1308549011ceff08869d1682p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_e3d22b2f1308549011ceff08869d1682p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_e3d22b2f1308549011ceff08869d1682p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_e3d22b2f1308549011ceff08869d1682p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_e3d22b2f1308549011ceff08869d1682p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_e3d22b2f1308549011ceff08869d1682p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_e3d22b2f1308549011ceff08869d1682p@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_e3d22b2f1308549011ceff08869d1682p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_e3d22b2f1308549011ceff08869d1682p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_e3d22b2f1308549011ceff08869d1682p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_e3d22b2f1308549011ceff08869d1682p3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_e3d22b2f1308549011ceff08869d1682p1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_e3d22b2f1308549011ceff08869d1682p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_e3d22b2f1308549011ceff08869d1682p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_e3d22b2f1308549011ceff08869d1682p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_e3d22b2f1308549011ceff08869d1682p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e3d22b2f1308549011ceff08869d1682p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_e3d22b2f1308549011ceff08869d1682p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_e3d22b2f1308549011ceff08869d1682p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_e3d22b2f1308549011ceff08869d1682p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_e3d22b2f1308549011ceff08869d1682p2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_e3d22b2f1308549011ceff08869d1682p2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_e3d22b2f1308549011ceff08869d1682p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_e3d22b2f1308549011ceff08869d1682p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_e3d22b2f1308549011ceff08869d1682p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_e3d22b2f1308549011ceff08869d1682p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_e3d22b2f1308549011ceff08869d1682p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e3d22b2f1308549011ceff08869d1682p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_e3d22b2f1308549011ceff08869d1682p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_e3d22b2f1308549011ceff08869d1682p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_e3d22b2f1308549011ceff08869d1682p1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_e3d22b2f1308549011ceff08869d1682p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_e3d22b2f1308549011ceff08869d1682p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_e3d22b2f1308549011ceff08869d1682p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_e3d22b2f1308549011ceff08869d1682p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_e3d22b2f1308549011ceff08869d1682p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_e3d22b2f1308549011ceff08869d1682p5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_e3d22b2f1308549011ceff08869d1682p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_e3d22b2f1308549011ceff08869d1682p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_e3d22b2f1308549011ceff08869d1682p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_e3d22b2f1308549011ceff08869d1682p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_e3d22b2f1308549011ceff08869d1682p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_e3d22b2f1308549011ceff08869d1682p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_e3d22b2f1308549011ceff08869d1682p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_e3d22b2f1308549011ceff08869d1682p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_e3d22b2f1308549011ceff08869d1682p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_e3d22b2f1308549011ceff08869d1682p2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_e3d22b2f1308549011ceff08869d1682p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_e3d22b2f1308549011ceff08869d1682p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_e3d22b2f1308549011ceff08869d1682p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_e3d22b2f1308549011ceff08869d1682p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_e3d22b2f1308549011ceff08869d1682p9@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_e3d22b2f1308549011ceff08869d1682p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_e3d22b2f1308549011ceff08869d1682p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_e3d22b2f1308549011ceff08869d1682p@chr14:20649897..20649907, +

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