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{{CL
{{CL
|id=CL:0000056
|alt_id=
|name=myoblast
|namespace=cell;;efo
|def="A precursor cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [GOC:tfm, MESH:A.11.635]
|xref=BTO:0000222;;FBbt:00005083;;FMA:70335
|is_a=CL:0000680;;CL:0002321
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A precursor cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [GOC:tfm, MESH:A.11.635]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0000355
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000056
|is_a=CL:0000680
|is_obsolete=
|located_in=
|located_in=
|name=myoblast
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0000222;;FBbt:00005083;;FMA:70335
}}
}}

Latest revision as of 16:28, 12 September 2014

Name:myoblast
Namespace:FANTOM
Definition:"A precursor cell of the myogenic lineage that develops from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes." [GOC:tfm, MESH:A.11.635]
Xrefs:
links:

BTO:0000222
FBbt:00005083

FMA:70335


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000680(muscle precursor cell)
develops_from:CL:0000355(multi-potent skeletal muscle stem cell)



Children


is a:CL:0000514 (smooth muscle myoblast),CL:0000515 (skeletal muscle myoblast),CL:0010021 (cardiac myoblast)
derives from:FF:0200006 (myoblast differentiation to myotubes, control sample)
develops from:CL:0000187 (muscle cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000056 (myoblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.36e-86FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_1b553f5a6cab995fe458b828022c9081p@chrX:160838683..160838694, +
1.36e-86FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_1b553f5a6cab995fe458b828022c9081p@chrX:160838683..160838694, +
1.01e-74FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_2d78290a5e1a113d37a594f085710f51p@chr12:105433069..105433075, -
1.01e-74FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_2d78290a5e1a113d37a594f085710f51p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_2d78290a5e1a113d37a594f085710f51p@chrX:65748600..65748616, +
1.01e-74FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_2d78290a5e1a113d37a594f085710f51p@chr12:105433069..105433075, -
2.48e-72FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_6c5ce68f9b418856c19ba88914585f28p@chrX:160838787..160838800, +
2.48e-72FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_6c5ce68f9b418856c19ba88914585f28p@chrX:160838787..160838800, +
1.74e-65FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_bf6a1e0f4516d77ac76161dd4e62c4d2p@chr11:81849982..81850000, +
1.74e-65FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_bf6a1e0f4516d77ac76161dd4e62c4d2p@chr11:81849982..81850000, +
1.33e-60FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_0957f4aeb3cf3048588e9dadce31417bp@chr17:14813242..14813246, -
1.33e-60FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_0957f4aeb3cf3048588e9dadce31417bp@chr17:14813242..14813246, -
1.36e-58FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_821b8fc91ce963f0fd201a80827381d7p4@Gpr39
1.36e-58FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_821b8fc91ce963f0fd201a80827381d7p4@Gpr39
3.91e-58FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_b52274183f485c997bcbd13b404f722dp@chrX:160840025..160840037, +
3.91e-58FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_b52274183f485c997bcbd13b404f722dp@chrX:160840048..160840057, +
3.91e-58FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_b52274183f485c997bcbd13b404f722dp@chrX:160823859..160823870, +
3.91e-58FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_b52274183f485c997bcbd13b404f722dp@chrX:160840025..160840037, +
3.91e-58FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_b52274183f485c997bcbd13b404f722dp@chrX:160840048..160840057, +
3.91e-58FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_b52274183f485c997bcbd13b404f722dp@chrX:160823859..160823870, +
1.02e-52FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_f761cabfc93edb998e1070fbdf605b10p11@Fam198b
1.02e-52FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_f761cabfc93edb998e1070fbdf605b10p11@Fam198b
1.99e-52FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_208110720a360481303dee413518b068p@chr1:127574253..127574264, +
1.99e-52FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_208110720a360481303dee413518b068p@chr1:127574253..127574264, +
3.23e-52FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_6c7c7ec89cc3482ee5c575c7f0764d46p7@Gpr39
3.23e-52FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_6c7c7ec89cc3482ee5c575c7f0764d46p7@Gpr39
4.11e-52FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_9ca7700906380bbb88f7034003589004p11@Gpr39
4.11e-52FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_9ca7700906380bbb88f7034003589004p11@Gpr39
5.23e-52FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_102728f7f568ce7923ff3ae847f89c5bp@chrX:160839768..160839780, +
5.23e-52FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_102728f7f568ce7923ff3ae847f89c5bp@chrX:160839768..160839780, +
1.37e-51FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_f2376b533e712f2eec0b1b78af718919p8@Gpr39
1.37e-51FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_f2376b533e712f2eec0b1b78af718919p8@Gpr39
9.51e-51FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_bbb713496604aa3cf2515e62fe70de2ap@chr6:53359400..53359406, +
9.51e-51FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_bbb713496604aa3cf2515e62fe70de2ap@chr6:53359400..53359406, +
3.73e-48FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_cdddf51187478a37bb83892771e61d3ep@chr7:96658543..96658553, -
3.73e-48FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_cdddf51187478a37bb83892771e61d3ep@chr7:96658543..96658553, -
6.34e-47FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_6156ad609306a38c578c76e13cc9edb4p2@Il6
6.34e-47FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_6156ad609306a38c578c76e13cc9edb4p@chr7:91081998..91082010, -
6.34e-47FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_6156ad609306a38c578c76e13cc9edb4p2@Il6
6.34e-47FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_6156ad609306a38c578c76e13cc9edb4p@chr7:91081998..91082010, -
7.16e-47FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_947b1ad8540703221dff79e2e822b70dp@chr18:52678391..52678395, -
7.16e-47FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_947b1ad8540703221dff79e2e822b70dp@chr18:52678391..52678395, -
8.31e-47FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_08ed48b566ad52df53e820fc20e1a846p@chr10:67598037..67598049, -
8.31e-47FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_08ed48b566ad52df53e820fc20e1a846p@chr10:67598037..67598049, -
1.86e-46FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_70bca09fa78bb76c86171b0d314668a7p@chr2:65009852..65009866, -
1.86e-46FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_70bca09fa78bb76c86171b0d314668a7p@chr2:65009852..65009866, -
5.11e-46FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_ddb61e06a1ad0619297828dad423d390p@chr6:91222095..91222107, +
5.11e-46FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_ddb61e06a1ad0619297828dad423d390p@chr6:91222095..91222107, +
7.81e-46FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_bb5855e1253fee97027bbf0ce48790a6p9@Kctd10
7.81e-46FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_bb5855e1253fee97027bbf0ce48790a6p9@Kctd10
9.65e-46FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_fed7dd15682813705240c515b4aee523p6@Gpr39
9.65e-46FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_fed7dd15682813705240c515b4aee523p6@Gpr39
1.69e-44FFCP PHASE1:Mm9::chrX:70740923..70740934,+#_6c3a337018e251459da45d8d66efe50ap@chrX:70740923..70740934, +
1.69e-44FFCP PHASE2:Mm9::chrX:70740923..70740934,+#_6c3a337018e251459da45d8d66efe50ap@chrX:70740923..70740934, +
5.38e-44FFCP PHASE2:Mm9::chrX:160839338..160839364,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chrX:160839338..160839364, +
5.38e-44FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:87574327..87574332, +
5.38e-44FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_e1aa2281cdb5bb119dbfb7673efd7915p3@E030003E18Rik
5.38e-44FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:14827154..14827169, -
5.38e-44FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chrX:160839744..160839754, +
5.38e-44FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr9:102766842..102766853, +
5.38e-44FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:14802633..14802637, -
5.38e-44FFCP PHASE2:Mm9::chrX:160829660..160829667,+#_e1aa2281cdb5bb119dbfb7673efd7915p14@Figf
5.38e-44FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr9:56096674..56096680, +
5.38e-44FFCP PHASE2:Mm9::chr16:85900926..85900936,-#_e1aa2281cdb5bb119dbfb7673efd7915p9@Adamts5
5.38e-44FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:14827154..14827169, -
5.38e-44FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr9:102766842..102766853, +
5.38e-44FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr2:112043522..112043530, -
5.38e-44FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr7:106471695..106471701, +
5.38e-44FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:14802633..14802637, -
5.38e-44FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chrX:160839744..160839754, +
5.38e-44FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr17:87574327..87574332, +
5.38e-44FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_e1aa2281cdb5bb119dbfb7673efd7915p3@E030003E18Rik
5.38e-44FFCP PHASE1:Mm9::chr16:85900926..85900936,-#_e1aa2281cdb5bb119dbfb7673efd7915p9@Adamts5
5.38e-44FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr2:178190171..178190178, +
5.38e-44FFCP PHASE1:Mm9::chrX:160839338..160839364,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chrX:160839338..160839364, +
5.38e-44FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_e1aa2281cdb5bb119dbfb7673efd7915p@chr2:112043522..112043530, -
5.38e-44FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr9:56096674..56096680, +
5.38e-44FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr2:178190171..178190178, +
5.38e-44FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr8:69228447..69228492, +
5.38e-44FFCP PHASE1:Mm9::chrX:160829660..160829667,+#_e1aa2281cdb5bb119dbfb7673efd7915p14@Figf
5.38e-44FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_e1aa2281cdb5bb119dbfb7673efd7915p5@Adamts2
5.38e-44FFCP PHASE2:Mm9::chr7:106471695..106471701,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr7:106471695..106471701, +
5.38e-44FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_e1aa2281cdb5bb119dbfb7673efd7915p@chr8:69228447..69228492, +
5.38e-44FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_e1aa2281cdb5bb119dbfb7673efd7915p5@Adamts2
2.46e-41FFCP PHASE1:Mm9::chrX:160832435..160832462,+#_9e3cde6795faa50bcde8d0ff6b09a656p@chrX:160832435..160832462, +
2.46e-41FFCP PHASE1:Mm9::chrX:160839194..160839217,+#_9e3cde6795faa50bcde8d0ff6b09a656p@chrX:160839194..160839217, +
2.46e-41FFCP PHASE2:Mm9::chrX:160832435..160832462,+#_9e3cde6795faa50bcde8d0ff6b09a656p@chrX:160832435..160832462, +
2.46e-41FFCP PHASE2:Mm9::chrX:160839194..160839217,+#_9e3cde6795faa50bcde8d0ff6b09a656p@chrX:160839194..160839217, +
4.98e-41FFCP PHASE1:Mm9::chr6:91220024..91220048,+#_703febdc5bedb8d4bc416881c5c7a699p@chr6:91220024..91220048, +
4.98e-41FFCP PHASE2:Mm9::chr6:91220024..91220048,+#_703febdc5bedb8d4bc416881c5c7a699p@chr6:91220024..91220048, +
3.93e-40FFCP PHASE2:Mm9::chr9:102622418..102622429,+#_000394459f091a9641616d1a69e3d674p10@Amotl2
3.93e-40FFCP PHASE1:Mm9::chr9:102622418..102622429,+#_000394459f091a9641616d1a69e3d674p10@Amotl2
4.96e-40FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_5a059a1e9a163c64d21f51bd4ea79e6fp8@ARHGAP22
4.96e-40FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_5a059a1e9a163c64d21f51bd4ea79e6fp8@ARHGAP22
7.49e-40FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_1d32d5e7218b9d754b86ecc8b171bc72p2@LRRC17
7.49e-40FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_1d32d5e7218b9d754b86ecc8b171bc72p2@LRRC17
1.92e-39FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_14bda5dc83f52923ea22b8c07a58115cp10@Gpr39
1.92e-39FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_14bda5dc83f52923ea22b8c07a58115cp10@Gpr39
3.01e-39FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_3e2af93e101f15a84a62080c9904c5e9p@chrX:160839663..160839673, +
3.01e-39FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_3e2af93e101f15a84a62080c9904c5e9p@chrX:160839663..160839673, +

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