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{{CL
{{CL
|id=CL:0000473
|alt_id=
|name=defensive cell
|namespace=cell
|def="A cell whose primary function is to protect the organism." [JB:jb]
|xref=
|is_a=CL:0000003
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A cell whose primary function is to protect the organism." [JB:jb]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000473
|is_a=CL:0000003
|is_obsolete=
|located_in=
|located_in=
|name=defensive cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:34, 12 September 2014

Name:defensive cell
Namespace:FANTOM
Definition:"A cell whose primary function is to protect the organism." [JB:jb]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000234 (phagocyte),CL:0000682 (M cell of gut)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000473 (defensive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.0e-160FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_dcd06b8cb87806e1ab4468072a8db21ep@chrX:37664331..37664352, +
3.0e-160FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_dcd06b8cb87806e1ab4468072a8db21ep@chrX:37664331..37664352, +
1.12e-152FFCP PHASE1:Hg19::chr17:72606825..72606838,-#_fea5a23c2d3d7ec025a3fd3861d99c44p@chr17:72606825..72606838, -
1.12e-152FFCP PHASE2:Hg19::chr17:72606825..72606838,-#_fea5a23c2d3d7ec025a3fd3861d99c44p@chr17:72606825..72606838, -
4.58e-152FFCP PHASE1:Hg19::chr11:58979924..58979941,-#_6e6a267af2bef6bd9393ce8389162c55p4@MPEG1
4.58e-152FFCP PHASE2:Hg19::chr11:58979924..58979941,-#_6e6a267af2bef6bd9393ce8389162c55p4@MPEG1
5.71e-152FFCP PHASE1:Hg19::chr8:71452856..71452863,+#_91b40bda88264d3a4d9956cc9915d205p@chr8:71452856..71452863, +
5.71e-152FFCP PHASE2:Hg19::chr8:71452856..71452863,+#_91b40bda88264d3a4d9956cc9915d205p@chr8:71452856..71452863, +
2.22e-151FFCP PHASE1:Hg19::chr17:72607351..72607373,-#_92add84c6913b2db58f3fa96cab419c8p@chr17:72607351..72607373, -
2.22e-151FFCP PHASE2:Hg19::chr17:72607351..72607373,-#_92add84c6913b2db58f3fa96cab419c8p@chr17:72607351..72607373, -
2.51e-151FFCP PHASE2:Hg19::chr19:55208119..55208134,+#_6f644f0f5674ed9d04cd521c45d397acp1@LILRP1
2.51e-151FFCP PHASE1:Hg19::chr19:55208119..55208134,+#_6f644f0f5674ed9d04cd521c45d397acp1@LILRP1
6.02e-151FFCP PHASE1:Hg19::chr4:185314351..185314392,+#_ec8f6c6f49904d6e6c4d35c55e540ee8p@chr4:185314351..185314392, +
6.02e-151FFCP PHASE2:Hg19::chr4:185314351..185314392,+#_ec8f6c6f49904d6e6c4d35c55e540ee8p@chr4:185314351..185314392, +
1.13e-150FFCP PHASE1:Hg19::chr7:44661060..44661101,-#_2d2c5d9f82622b3f08d5ffaa382caf3dp@chr7:44661060..44661101, -
1.13e-150FFCP PHASE2:Hg19::chr7:44661060..44661101,-#_2d2c5d9f82622b3f08d5ffaa382caf3dp@chr7:44661060..44661101, -
2.0e-150FFCP PHASE1:Hg19::chr17:72628050..72628077,-#_c5235056c4e8805bcd04126aaa740577p@chr17:72628050..72628077, -
2.0e-150FFCP PHASE2:Hg19::chr17:72628050..72628077,-#_c5235056c4e8805bcd04126aaa740577p@chr17:72628050..72628077, -
9.24e-150FFCP PHASE1:Hg19::chr14:55249943..55249971,+#_c0289903ab798846ac2fb0b450779a3ep@chr14:55249943..55249971, +
9.24e-150FFCP PHASE2:Hg19::chr14:55249943..55249971,+#_c0289903ab798846ac2fb0b450779a3ep@chr14:55249943..55249971, +
1.2e-149FFCP PHASE2:Hg19::chr7:151503418..151503445,+#_a268ba13012b0bc23cbcd75b396de82bp1@ENST00000481153
1.2e-149FFCP PHASE1:Hg19::chr7:151503418..151503445,+#_a268ba13012b0bc23cbcd75b396de82bp1@ENST00000481153
5.67e-149FFCP PHASE2:Hg19::chr17:72607002..72607029,+#_77536faf144489dd5053a5462cdb55c6p@chr17:72607002..72607029, +
5.67e-149FFCP PHASE1:Hg19::chr17:72607002..72607029,+#_77536faf144489dd5053a5462cdb55c6p@chr17:72607002..72607029, +
6.94e-148FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_aa6f06130c8b1fcbcd4b6dc2f2d28c89p@chr17:7482481..7482508, -
6.94e-148FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_aa6f06130c8b1fcbcd4b6dc2f2d28c89p@chr17:7482481..7482508, -
1.27e-147FFCP PHASE2:Hg19::chr8:11755021..11755054,+#_fec7e49c1f09c979b408b4f9784f050dp@chr8:11755021..11755054, +
1.27e-147FFCP PHASE1:Hg19::chr8:11755021..11755054,+#_fec7e49c1f09c979b408b4f9784f050dp@chr8:11755021..11755054, +
1.17e-146FFCP PHASE1:Hg19::chr3:128943968..128943986,+#_e3b1de1b8345a7163a9f314375969db3p@chr3:128943968..128943986, +
1.17e-146FFCP PHASE2:Hg19::chr3:128943968..128943986,+#_e3b1de1b8345a7163a9f314375969db3p@chr3:128943968..128943986, +
1.84e-146FFCP PHASE1:Hg19::chr2:143623608..143623622,-#_98e49e2fe258f4dfc2644432875824dep@chr2:143623608..143623622, -
1.84e-146FFCP PHASE2:Hg19::chr2:143623608..143623622,-#_98e49e2fe258f4dfc2644432875824dep@chr2:143623608..143623622, -
8.93e-146FFCP PHASE1:Hg19::chr19:51625943..51625962,+#_c2a205308e4cee48f4ec3a4d30a114a8p@chr19:51625943..51625962, +
8.93e-146FFCP PHASE2:Hg19::chr19:51625943..51625962,+#_c2a205308e4cee48f4ec3a4d30a114a8p@chr19:51625943..51625962, +
1.23e-145FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_d42de0113f93184de5f9688a174d9592p@chr1:161188746..161188758, +
1.23e-145FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_d42de0113f93184de5f9688a174d9592p@chr1:161188746..161188758, +
2.49e-145FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_d8bad4b8ca9808e1b5a23c5dc3a56916p@chr19:51625924..51625942, +
2.49e-145FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_d8bad4b8ca9808e1b5a23c5dc3a56916p@chr19:51625924..51625942, +
2.76e-145FFCP PHASE1:Hg19::chr1:111182849..111182891,+#_2900c967d8a10cf8e6b97e7e6b0a565cp@chr1:111182849..111182891, +
2.76e-145FFCP PHASE2:Hg19::chr1:111182849..111182891,+#_2900c967d8a10cf8e6b97e7e6b0a565cp@chr1:111182849..111182891, +
4.97e-145FFCP PHASE2:Hg19::chr17:72607152..72607174,-#_e0f2c15f75caa13a6a4a6f2fdcd75e07p@chr17:72607152..72607174, -
4.97e-145FFCP PHASE1:Hg19::chr17:72607152..72607174,-#_e0f2c15f75caa13a6a4a6f2fdcd75e07p@chr17:72607152..72607174, -
5.74e-145FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_a77612cdb5128d3125bd9250c563f00ap@chr7:77050554..77050601, +
5.74e-145FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_a77612cdb5128d3125bd9250c563f00ap@chr7:77050554..77050601, +
8.55e-145FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_1bcf7b050a44bed02ba38dca91ed9918p2@ZEB2-AS1
8.55e-145FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_1bcf7b050a44bed02ba38dca91ed9918p2@ZEB2-AS1
9.86e-145FFCP PHASE2:Hg19::chr11:68847043..68847057,+#_5bed98995cc03a781b33a7fa4e52c577p@chr11:68847043..68847057, +
9.86e-145FFCP PHASE1:Hg19::chr11:68847043..68847057,+#_5bed98995cc03a781b33a7fa4e52c577p@chr11:68847043..68847057, +
1.43e-144FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_e57374ee38ff91ae56a5141e63e4dc66p@chr1:161188661..161188679, +
1.43e-144FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_e57374ee38ff91ae56a5141e63e4dc66p@chr1:161188661..161188679, +
1.93e-144FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_c69fda90d4ede200003974ac13f512eap1@ENST00000425320
1.93e-144FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_c69fda90d4ede200003974ac13f512eap1@ENST00000425320
5.05e-144FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_7693b643f0317714ef10f0e19314939ep5@IFI30
5.05e-144FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_7693b643f0317714ef10f0e19314939ep5@IFI30
2.75e-143FFCP PHASE2:Hg19::chr1:120593738..120593745,+#_6aa9687b90bcb665670220fe6e10a692p@chr1:120593738..120593745, +
2.75e-143FFCP PHASE1:Hg19::chr1:120593738..120593745,+#_6aa9687b90bcb665670220fe6e10a692p@chr1:120593738..120593745, +
3.2e-143FFCP PHASE2:Hg19::chr1:27943424..27943442,-#_157d10f8b9f71fb92e51d38d6231348bp@chr1:27943424..27943442, -
3.2e-143FFCP PHASE1:Hg19::chr1:27943424..27943442,-#_157d10f8b9f71fb92e51d38d6231348bp@chr1:27943424..27943442, -
5.48e-143FFCP PHASE1:Hg19::chr7:48009999..48010016,+#_51e0306f64145ab518fe40eb42ad25fbp@chr7:48009999..48010016, +
5.48e-143FFCP PHASE2:Hg19::chr7:48009999..48010016,+#_51e0306f64145ab518fe40eb42ad25fbp@chr7:48009999..48010016, +
9.17e-143FFCP PHASE2:Hg19::chr16:82229835..82229848,+#_7542f74ab11b6b5dd311cc2cf18c37dcp@chr16:82229835..82229848, +
9.17e-143FFCP PHASE1:Hg19::chr16:82229835..82229848,+#_7542f74ab11b6b5dd311cc2cf18c37dcp@chr16:82229835..82229848, +
2.09e-142FFCP PHASE2:Hg19::chr2:129283966..129283970,+#_bf384fc01df042fd9aa84241964af65ep@chr2:129283966..129283970, +
2.09e-142FFCP PHASE1:Hg19::chr2:129283966..129283970,+#_bf384fc01df042fd9aa84241964af65ep@chr2:129283966..129283970, +
2.81e-142FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_7ba15fff5205e18e9195299e9e0fc84ep@chr15:59469817..59469836, +
2.81e-142FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_7ba15fff5205e18e9195299e9e0fc84ep@chr15:59469817..59469836, +
3.09e-142FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_1ea4772c32e258a78c7ac3e571d6c8a8p@chr2:145429606..145429658, +
3.09e-142FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_1ea4772c32e258a78c7ac3e571d6c8a8p@chr2:145429606..145429658, +
3.6e-142FFCP PHASE2:Hg19::chr10:73648356..73648408,-#_1bc9780407e69c1c7ae5ffe4b91b201ap@chr10:73648356..73648408, -
3.6e-142FFCP PHASE1:Hg19::chr10:73648356..73648408,-#_1bc9780407e69c1c7ae5ffe4b91b201ap@chr10:73648356..73648408, -
4.15e-142FFCP PHASE2:Hg19::chr4:159731607..159731627,+#_3414de455b2d42099167529a6502d43cp@chr4:159731607..159731627, +
4.15e-142FFCP PHASE1:Hg19::chr4:159731607..159731627,+#_3414de455b2d42099167529a6502d43cp@chr4:159731607..159731627, +
9.43e-142FFCP PHASE1:Hg19::chr8:11754835..11754867,-#_7ad5e8593b714e4b4d01078bd4a39d73p1@ENST00000525252
9.43e-142FFCP PHASE2:Hg19::chr8:11754835..11754867,-#_7ad5e8593b714e4b4d01078bd4a39d73p1@ENST00000525252
1.12e-141FFCP PHASE1:Hg19::chr20:2191870..2191909,-#_c5041aa6112b9ad0e8eff361b980a083p@chr20:2191870..2191909, -
1.12e-141FFCP PHASE2:Hg19::chr20:2191870..2191909,-#_c5041aa6112b9ad0e8eff361b980a083p@chr20:2191870..2191909, -
1.17e-141FFCP PHASE1:Hg19::chr1:161188022..161188042,+#_bb90b0e5dac90bb1f9bb29dbe07bbfffp@chr1:161188022..161188042, +
1.17e-141FFCP PHASE2:Hg19::chr1:161188022..161188042,+#_bb90b0e5dac90bb1f9bb29dbe07bbfffp@chr1:161188022..161188042, +
3.2e-141FFCP PHASE1:Hg19::chr17:72606678..72606702,-#_9ad136b9b798ec91023f270fcb3f9593p@chr17:72606678..72606702, -
3.2e-141FFCP PHASE2:Hg19::chr17:72606678..72606702,-#_9ad136b9b798ec91023f270fcb3f9593p@chr17:72606678..72606702, -
3.49e-141FFCP PHASE1:Hg19::chr22:17717917..17717939,-#_ae151560f6e57e9950e627b61edcdcf0p@chr22:17717917..17717939, -
3.49e-141FFCP PHASE2:Hg19::chr22:17717917..17717939,-#_ae151560f6e57e9950e627b61edcdcf0p@chr22:17717917..17717939, -
4.64e-141FFCP PHASE2:Hg19::chr6:46698996..46699019,+#_156f1efac335dcb5a3fa3fdd96575fc3p@chr6:46698996..46699019, +
4.64e-141FFCP PHASE1:Hg19::chr6:46698996..46699019,+#_156f1efac335dcb5a3fa3fdd96575fc3p@chr6:46698996..46699019, +
5.93e-141FFCP PHASE2:Hg19::chr2:143623546..143623573,-#_eefd24c96cb0899e25473730f1ade44ep@chr2:143623546..143623573, -
5.93e-141FFCP PHASE1:Hg19::chr2:143623546..143623573,-#_eefd24c96cb0899e25473730f1ade44ep@chr2:143623546..143623573, -
6.3e-141FFCP PHASE2:Hg19::chr12:125197870..125197907,+#_93a3ed8a9e218e71e3df58d00fea1b72p@chr12:125197870..125197907, +
6.3e-141FFCP PHASE1:Hg19::chr12:125197870..125197907,+#_93a3ed8a9e218e71e3df58d00fea1b72p@chr12:125197870..125197907, +
6.36e-141FFCP PHASE2:Hg19::chr20:2191845..2191866,-#_56c9edf02361a898adec252a6897b0f7p@chr20:2191845..2191866, -
6.36e-141FFCP PHASE1:Hg19::chr20:2191845..2191866,-#_56c9edf02361a898adec252a6897b0f7p@chr20:2191845..2191866, -
6.5e-141FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_2fe32c54be11b6c5c0f78bf0de1d7931p1@CYP1B1-AS1
6.5e-141FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_2fe32c54be11b6c5c0f78bf0de1d7931p1@CYP1B1-AS1
7.62e-141FFCP PHASE1:Hg19::chr5:156534439..156534470,+#_342481df3ae926e25051538d6a94b9e2p@chr5:156534439..156534470, +
7.62e-141FFCP PHASE2:Hg19::chr5:156534439..156534470,+#_342481df3ae926e25051538d6a94b9e2p@chr5:156534439..156534470, +
1.24e-140FFCP PHASE1:Hg19::chr2:145421047..145421067,+#_9af075899727c8139fd6b27b574e1e04p@chr2:145421047..145421067, +
1.24e-140FFCP PHASE2:Hg19::chr2:145421047..145421067,+#_9af075899727c8139fd6b27b574e1e04p@chr2:145421047..145421067, +
1.97e-140FFCP PHASE1:Hg19::chr9:137300477..137300490,+#_3b6e4115d0e0ef40fbaf8c30f15dae5dp@chr9:137300477..137300490, +
1.97e-140FFCP PHASE2:Hg19::chr9:137300477..137300490,+#_3b6e4115d0e0ef40fbaf8c30f15dae5dp@chr9:137300477..137300490, +
3.85e-140FFCP PHASE2:Hg19::chr10:106006943..106006961,+#_1640037d3a7147b1d7f4b02fbbd12f57p@chr10:106006943..106006961, +
3.85e-140FFCP PHASE1:Hg19::chr10:106006943..106006961,+#_1640037d3a7147b1d7f4b02fbbd12f57p@chr10:106006943..106006961, +

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